RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 ST18O60284 1047 aa18.11■□□□□ 0.49
TRIM13-201ENST00000356017 GOLGA8HP0CJ92 632 aa18.11■□□□□ 0.49
TRIM13-201ENST00000356017 AK2P54819 239 aa18.11■□□□□ 0.49
TRIM13-201ENST00000356017 KIFC2Q96AC6 838 aa18.11■□□□□ 0.49
TRIM13-201ENST00000356017 ZNF274Q96GC6 653 aaPredicted RBP18.11■□□□□ 0.49
TRIM13-201ENST00000356017 LZTS2Q9BRK4 669 aa18.11■□□□□ 0.49
TRIM13-201ENST00000356017 RBM28Q9NW13 759 aaKnown RBP18.11■□□□□ 0.49
TRIM13-201ENST00000356017 ADAMTS5Q9UNA0 930 aa18.11■□□□□ 0.49
TRIM13-201ENST00000356017 GOLGA8BA8MQT2 603 aa18.1■□□□□ 0.49
TRIM13-201ENST00000356017 TBC1D8O95759 1140 aa18.1■□□□□ 0.49
TRIM13-201ENST00000356017 SAMD1Q6SPF0 538 aaPredicted RBP18.1■□□□□ 0.49
TRIM13-201ENST00000356017 RABGAP1Q9Y3P9 1069 aa18.1■□□□□ 0.49
TRIM13-201ENST00000356017 CTDP1Q9Y5B0 961 aaPredicted RBP18.1■□□□□ 0.49
TRIM13-201ENST00000356017 VWA5AO00534 786 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 ZBED4O75132 1171 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 SMARCA1P28370 1054 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 PDIA3P30101 505 aaKnown RBP18.09■□□□□ 0.49
TRIM13-201ENST00000356017 METAP2P50579 478 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRIM13-201ENST00000356017 SYDE2Q5VT97 1194 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 TTBK2Q6IQ55 1244 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 STAG2Q8N3U4 1231 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 ATG4CQ96DT6 458 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 PRR12Q9ULL5 1215 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 GOLGA8AA7E2F4 631 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 RXRAP19793 462 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 SLC16A2P36021 539 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 RTN1Q16799 776 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 FAM110CQ1W6H9 321 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 NOM1Q5C9Z4 860 aaKnown RBP18.09■□□□□ 0.49
TRIM13-201ENST00000356017 C17orf99Q6UX52 265 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 RBPJLQ9UBG7 517 aa18.09■□□□□ 0.49
TRIM13-201ENST00000356017 ADGRA2Q96PE1 1338 aa18.08■□□□□ 0.49
TRIM13-201ENST00000356017 CCDC144CPQ8IYA2 1237 aa18.08■□□□□ 0.48
TRIM13-201ENST00000356017 ANKRD13CQ8N6S4 541 aa18.08■□□□□ 0.48
TRIM13-201ENST00000356017 GPRC5AQ8NFJ5 357 aa18.08■□□□□ 0.48
TRIM13-201ENST00000356017 UBA5Q9GZZ9 404 aa18.08■□□□□ 0.48
TRIM13-201ENST00000356017 SLC38A10Q9HBR0 1119 aa18.08■□□□□ 0.48
TRIM13-201ENST00000356017 MORF4L1Q9UBU8 362 aa18.08■□□□□ 0.48
TRIM13-201ENST00000356017 CPA4Q9UI42 421 aa18.08■□□□□ 0.48
TRIM13-201ENST00000356017 NID2Q14112 1375 aa18.07■□□□□ 0.48
TRIM13-201ENST00000356017 DHX16O60231 1041 aaKnown RBP18.07■□□□□ 0.48
TRIM13-201ENST00000356017 BCRP11274 1271 aa18.07■□□□□ 0.48
TRIM13-201ENST00000356017 OAZ1P54368 228 aa18.07■□□□□ 0.48
TRIM13-201ENST00000356017 RAB11FIP4Q86YS3 637 aa18.07■□□□□ 0.48
TRIM13-201ENST00000356017 PAGR1Q9BTK6 254 aa18.07■□□□□ 0.48
TRIM13-201ENST00000356017 PNMA2Q9UL42 364 aa18.07■□□□□ 0.48
TRIM13-201ENST00000356017 LIMCH1Q9UPQ0 1083 aa18.07■□□□□ 0.48
TRIM13-201ENST00000356017 HPS5Q9UPZ3 1129 aa18.07■□□□□ 0.48
TRIM13-201ENST00000356017 MCM2P49736 904 aa18.06■□□□□ 0.48
TRIM13-201ENST00000356017 CCNA1P78396 465 aa18.06■□□□□ 0.48
TRIM13-201ENST00000356017 ADGRF4Q8IZF3 695 aa18.06■□□□□ 0.48
TRIM13-201ENST00000356017 LARP6Q9BRS8 491 aaKnown RBP18.06■□□□□ 0.48
TRIM13-201ENST00000356017 SPZ1Q9BXG8 430 aa18.06■□□□□ 0.48
TRIM13-201ENST00000356017 SLKQ9H2G2 1235 aaPredicted RBP18.06■□□□□ 0.48
TRIM13-201ENST00000356017 R3HDMLQ9H3Y0 253 aa18.06■□□□□ 0.48
TRIM13-201ENST00000356017 TPCN1Q9ULQ1 816 aa18.06■□□□□ 0.48
TRIM13-201ENST00000356017 GPR25O00155 361 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 ATP2A1O14983 1001 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 ERVK-9P63128 1117 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 ERVK-24P63145 666 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 TMTC3Q6ZXV5 915 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 ZSCAN31Q96LW9 406 aaPredicted RBP18.05■□□□□ 0.48
TRIM13-201ENST00000356017 RANBP17Q9H2T7 1088 aaKnown RBP18.05■□□□□ 0.48
TRIM13-201ENST00000356017 RIOX1Q9H6W3 641 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 TXNRD2Q9NNW7 524 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 BTBD7Q9P203 1132 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 SP3Q02447 781 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 PLS1Q14651 629 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 TMEM132BQ14DG7 1078 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 POTEEQ6S8J3 1075 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 REPS2Q8NFH8 660 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 TEX13BQ9BXU2 312 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 SPATC1LQ9H0A9 340 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 CPVLQ9H3G5 476 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 JMJD4Q9H9V9 463 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 VAT1LQ9HCJ6 419 aa18.05■□□□□ 0.48
TRIM13-201ENST00000356017 ZNF214Q9UL59 606 aaPredicted RBP18.05■□□□□ 0.48
TRIM13-201ENST00000356017 CPLX1O14810 134 aa18.04■□□□□ 0.48
TRIM13-201ENST00000356017 PFKFB2O60825 505 aa18.04■□□□□ 0.48
TRIM13-201ENST00000356017 CNMDO75829 334 aa18.04■□□□□ 0.48
TRIM13-201ENST00000356017 HSPA1AP0DMV8 641 aaKnown RBP18.04■□□□□ 0.48
TRIM13-201ENST00000356017 HSPA1BP0DMV9 641 aaKnown RBP18.04■□□□□ 0.48
TRIM13-201ENST00000356017 CDC27P30260 824 aa18.04■□□□□ 0.48
TRIM13-201ENST00000356017 COPB2P35606 906 aa18.04■□□□□ 0.48
TRIM13-201ENST00000356017 ADD1P35611 737 aaKnown RBP18.04■□□□□ 0.48
TRIM13-201ENST00000356017 STAT3P40763 770 aa18.04■□□□□ 0.48
TRIM13-201ENST00000356017 CCT2P78371 535 aaKnown RBP18.04■□□□□ 0.48
TRIM13-201ENST00000356017 TRAF1Q13077 416 aa18.04■□□□□ 0.48
TRIM13-201ENST00000356017 CPLX2Q6PUV4 134 aaKnown RBP18.04■□□□□ 0.48
TRIM13-201ENST00000356017 NOL8Q76FK4 1167 aaKnown RBP18.04■□□□□ 0.48
TRIM13-201ENST00000356017 SRBD1Q8N5C6 995 aaKnown RBP18.04■□□□□ 0.48
TRIM13-201ENST00000356017 SH2B1Q9NRF2 756 aaPredicted RBP18.04■□□□□ 0.48
TRIM13-201ENST00000356017 FAM217BQ9NTX9 383 aaPredicted RBP18.04■□□□□ 0.48
TRIM13-201ENST00000356017 PCNTO95613 3336 aa18.03■□□□□ 0.48
TRIM13-201ENST00000356017 CYTH3O43739 400 aa18.03■□□□□ 0.48
TRIM13-201ENST00000356017 PLEKHA8P1O95397 391 aa18.03■□□□□ 0.48
TRIM13-201ENST00000356017 SLC25A27O95847 323 aa18.03■□□□□ 0.48
TRIM13-201ENST00000356017 STK3Q13188 491 aa18.03■□□□□ 0.48
TRIM13-201ENST00000356017 KIF22Q14807 665 aa18.03■□□□□ 0.48
TRIM13-201ENST00000356017 Q3C1V9 767 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms