RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 POLA2Q14181 598 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 KCNJ12Q14500 433 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 PSMD6Q15008 389 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 SSH3Q8TE77 659 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 C1orf112Q9NSG2 853 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 GTF2A1P52655 376 aaPredicted RBP19.86■□□□□ 0.77
COL18A1-202ENST00000355480 FAM178BQ8IXR5 827 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 GOLGA5Q8TBA6 731 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 CCDC94Q9BW85 323 aaPredicted RBP19.86■□□□□ 0.77
COL18A1-202ENST00000355480 CCPG1Q9ULG6 757 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 ABCB5Q2M3G0 1257 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 TRIM50Q86XT4 487 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 ZNF804BA4D1E1 1349 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 MAP3K15Q6ZN16 1313 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 LOC102724428A0A0B4J2F2 783 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 H0YCG3 227 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 ADD1P35611 737 aaKnown RBP19.85■□□□□ 0.77
COL18A1-202ENST00000355480 SIK1P57059 783 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 PTH1RQ03431 593 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 B4GALNT4Q76KP1 1039 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 IFRD2Q12894 506 aaPredicted RBP19.85■□□□□ 0.77
COL18A1-202ENST00000355480 SESTD1Q86VW0 696 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 RAB20Q9NX57 234 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 GOLGA6BA6NDN3 693 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 ARMCX3Q9UH62 379 aaPredicted RBP19.85■□□□□ 0.77
COL18A1-202ENST00000355480 KIF24Q5T7B8 1368 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 ZMYM4Q5VZL5 1548 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 STAM2O75886 525 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 IGBP1P78318 339 aa19.85■□□□□ 0.77
COL18A1-202ENST00000355480 MORC3Q14149 939 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 GREM2Q9H772 168 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 FEZ2Q9UHY8 353 aaPredicted RBP19.84■□□□□ 0.77
COL18A1-202ENST00000355480 DDAH1O94760 285 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 IFNB1P01574 187 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 POLGP54098 1239 aaPredicted RBP19.84■□□□□ 0.77
COL18A1-202ENST00000355480 ADKP55263 362 aaKnown RBP19.84■□□□□ 0.77
COL18A1-202ENST00000355480 CCDC62Q6P9F0 684 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 PNMA2Q9UL42 364 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 DLATP10515 647 aaKnown RBP19.84■□□□□ 0.77
COL18A1-202ENST00000355480 TTC31Q49AM3 519 aaPredicted RBP19.84■□□□□ 0.77
COL18A1-202ENST00000355480 CTAGE3PQ8IX95 158 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 MCUR1Q96AQ8 359 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 OATP04181 439 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 TMOD1P28289 359 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 CRKLP46109 303 aaKnown RBP19.84■□□□□ 0.77
COL18A1-202ENST00000355480 DMP1Q13316 513 aaPredicted RBP19.84■□□□□ 0.77
COL18A1-202ENST00000355480 KRT26Q7Z3Y9 468 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 VSIG1Q86XK7 387 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 MTMR3Q13615 1198 aa19.84■□□□□ 0.77
COL18A1-202ENST00000355480 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
COL18A1-202ENST00000355480 LRRIQ4A6NIV6 560 aa19.83■□□□□ 0.77
COL18A1-202ENST00000355480 N4BP1O75113 896 aaKnown RBP19.83■□□□□ 0.77
COL18A1-202ENST00000355480 FGAP02671 866 aa19.83■□□□□ 0.77
COL18A1-202ENST00000355480 GALNT17Q6IS24 598 aa19.83■□□□□ 0.77
COL18A1-202ENST00000355480 XPO4Q9C0E2 1151 aaKnown RBP19.83■□□□□ 0.77
COL18A1-202ENST00000355480 PLEKHA4Q9H4M7 779 aa19.83■□□□□ 0.77
COL18A1-202ENST00000355480 NRBP2Q9NSY0 501 aa19.83■□□□□ 0.77
COL18A1-202ENST00000355480 PPEF1O14829 653 aaPredicted RBP19.83■□□□□ 0.77
COL18A1-202ENST00000355480 SND1Q7KZF4 910 aaKnown RBP eCLIP19.83■□□□□ 0.772e-7■■■■□ 19.4
COL18A1-202ENST00000355480 HESX1Q9UBX0 185 aa19.83■□□□□ 0.77
COL18A1-202ENST00000355480 TMEM191BP0C7N4 346 aa19.83■□□□□ 0.76
COL18A1-202ENST00000355480 ARMCX5Q6P1M9 558 aa19.83■□□□□ 0.76
COL18A1-202ENST00000355480 GBP6Q6ZN66 633 aa19.83■□□□□ 0.76
COL18A1-202ENST00000355480 ATP2A3Q93084 1043 aa19.83■□□□□ 0.76
COL18A1-202ENST00000355480 RAB17Q9H0T7 212 aa19.83■□□□□ 0.76
COL18A1-202ENST00000355480 HADHQ16836 314 aaKnown RBP19.83■□□□□ 0.76
COL18A1-202ENST00000355480 LARSQ9P2J5 1176 aaKnown RBP19.83■□□□□ 0.76
COL18A1-202ENST00000355480 IGSF3O75054 1194 aa19.83■□□□□ 0.76
COL18A1-202ENST00000355480 PRPF31Q8WWY3 499 aaKnown RBP19.83■□□□□ 0.76
COL18A1-202ENST00000355480 PCDHA1Q9Y5I3 950 aa19.83■□□□□ 0.76
COL18A1-202ENST00000355480 COL4A3BPQ9Y5P4 624 aa19.83■□□□□ 0.76
COL18A1-202ENST00000355480 ELF2Q15723 593 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 DENND2CQ68D51 928 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 C17orf53Q8N3J3 647 aaPredicted RBP19.82■□□□□ 0.76
COL18A1-202ENST00000355480 MED23Q9ULK4 1368 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 SPDYE16A6NNV3 312 aaPredicted RBP19.82■□□□□ 0.76
COL18A1-202ENST00000355480 PFKFB2O60825 505 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 PDE6CP51160 858 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 SPDYE2Q495Y8 402 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 ARHGEF2Q92974 986 aaKnown RBP19.82■□□□□ 0.76
COL18A1-202ENST00000355480 ANKFY1Q9P2R3 1169 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 PARP2Q9UGN5 583 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 ERBB4Q15303 1308 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 CLRN2A0PK11 232 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 RIOK3O14730 519 aaKnown RBP19.82■□□□□ 0.76
COL18A1-202ENST00000355480 FAM160B1Q5W0V3 765 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 PLCB1Q9NQ66 1216 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 KIAA1468Q9P260 1216 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 XDHP47989 1333 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 SARNPP82979 210 aaKnown RBP19.82■□□□□ 0.76
COL18A1-202ENST00000355480 PALM2Q8IXS6 379 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 CCDC127Q96BQ5 260 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 CCDC51Q96ER9 411 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 RABEP2Q9H5N1 569 aa19.82■□□□□ 0.76
COL18A1-202ENST00000355480 QTRT2Q9H974 415 aaKnown RBP19.82■□□□□ 0.76
COL18A1-202ENST00000355480 PHKA1P46020 1223 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 ITKQ08881 620 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 OR8K1Q8NGG5 319 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 NBPF3Q9H094 633 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms