RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 BRAPQ7Z569 592 aa15.36■□□□□ 0.05
UBA3-201ENST00000349511 CCDC84Q86UT8 332 aaPredicted RBP15.36■□□□□ 0.05
UBA3-201ENST00000349511 FAM83AQ86UY5 434 aa15.36■□□□□ 0.05
UBA3-201ENST00000349511 ZNF396Q96N95 335 aaPredicted RBP15.36■□□□□ 0.05
UBA3-201ENST00000349511 NRBP1Q9UHY1 535 aa15.36■□□□□ 0.05
UBA3-201ENST00000349511 HERC5Q9UII4 1024 aaKnown RBP15.36■□□□□ 0.05
UBA3-201ENST00000349511 XBP1P17861 261 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 U2AF2P26368 475 aaKnown RBP eCLIP15.35■□□□□ 0.052e-6■■□□□ 12.6
UBA3-201ENST00000349511 SLC16A2P36021 539 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 GNAQP50148 359 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 PFKFB3Q16875 520 aaPredicted RBP15.35■□□□□ 0.05
UBA3-201ENST00000349511 CCDC96Q2M329 555 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 NOM1Q5C9Z4 860 aaKnown RBP15.35■□□□□ 0.05
UBA3-201ENST00000349511 FKBP1CQ5VVH2 108 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 TMEM179Q6ZVK1 233 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.35■□□□□ 0.05
UBA3-201ENST00000349511 ARID3AQ99856 593 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 KANSL2Q9H9L4 492 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 CABP5Q9NP86 173 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 RCOR1Q9UKL0 485 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 FZD1Q9UP38 647 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 GREB1LQ9C091 1923 aaPredicted RBP15.35■□□□□ 0.05
UBA3-201ENST00000349511 FAM205CA6NFA0 338 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 TNNI2P48788 182 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 EARS2Q5JPH6 523 aaKnown RBP15.35■□□□□ 0.05
UBA3-201ENST00000349511 ANGEL2Q5VTE6 544 aaKnown RBP15.35■□□□□ 0.05
UBA3-201ENST00000349511 TYW1BQ6NUM6 668 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 HEATR3Q7Z4Q2 680 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 GPC2Q8N158 579 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 PHF20Q9BVI0 1012 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 GPRC5DQ9NZD1 345 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 PGAP2Q9UHJ9 254 aa15.35■□□□□ 0.05
UBA3-201ENST00000349511 DICER1Q9UPY3 1922 aaKnown RBP15.34■□□□□ 0.05
UBA3-201ENST00000349511 ECE1P42892 770 aa15.34■□□□□ 0.05
UBA3-201ENST00000349511 NLRP5P59047 1200 aa15.34■□□□□ 0.05
UBA3-201ENST00000349511 LRMPQ12912 555 aa15.34■□□□□ 0.05
UBA3-201ENST00000349511 C9orf131Q5VYM1 1079 aa15.34■□□□□ 0.05
UBA3-201ENST00000349511 NOSTRINQ8IVI9 506 aa15.34■□□□□ 0.05
UBA3-201ENST00000349511 CCAR1Q8IX12 1150 aaKnown RBP15.34■□□□□ 0.05
UBA3-201ENST00000349511 PIGSQ96S52 555 aa15.34■□□□□ 0.05
UBA3-201ENST00000349511 NUP88Q99567 741 aaPredicted RBP15.34■□□□□ 0.05
UBA3-201ENST00000349511 DEFB129Q9H1M3 183 aa15.34■□□□□ 0.05
UBA3-201ENST00000349511 COL2A1P02458 1487 aaPredicted RBP15.34■□□□□ 0.05
UBA3-201ENST00000349511 A0A1W2PRG0 241 aa15.34■□□□□ 0.05
UBA3-201ENST00000349511 HIRAP54198 1017 aaPredicted RBP15.34■□□□□ 0.05
UBA3-201ENST00000349511 WWC2Q6AWC2 1192 aa15.34■□□□□ 0.05
UBA3-201ENST00000349511 SPICE1Q8N0Z3 855 aa15.34■□□□□ 0.05
UBA3-201ENST00000349511 TEPSINQ96N21 525 aa15.34■□□□□ 0.05
UBA3-201ENST00000349511 GOLPH3LQ9H4A5 285 aa15.34■□□□□ 0.05
UBA3-201ENST00000349511 RIOK3O14730 519 aaKnown RBP15.33■□□□□ 0.04
UBA3-201ENST00000349511 SNHG28P0DPA3 235 aa15.33■□□□□ 0.04
UBA3-201ENST00000349511 ME1P48163 572 aa15.33■□□□□ 0.04
UBA3-201ENST00000349511 STK38Q15208 465 aa15.33■□□□□ 0.04
UBA3-201ENST00000349511 SF3A1Q15459 793 aaKnown RBP15.33■□□□□ 0.04
UBA3-201ENST00000349511 ZYXQ15942 572 aaKnown RBP15.33■□□□□ 0.04
UBA3-201ENST00000349511 NBPF12Q5TAG4 269 aaPredicted RBP15.33■□□□□ 0.04
UBA3-201ENST00000349511 ACER1Q8TDN7 264 aa15.33■□□□□ 0.04
UBA3-201ENST00000349511 NYAP2Q9P242 653 aa15.33■□□□□ 0.04
UBA3-201ENST00000349511 F5H6K3 240 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 CTAGE5O15320 804 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 CAVIN2O95810 425 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 MARCKSP29966 332 aaPredicted RBP15.32■□□□□ 0.04
UBA3-201ENST00000349511 KRT2P35908 639 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 SLC1A4P43007 532 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 KLRC3Q07444 240 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 ZNF543Q08ER8 600 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 TNFAIP1Q13829 316 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 IQCB1Q15051 598 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 NPY5RQ15761 445 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 GPR162Q16538 588 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 SLFN13Q68D06 897 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 DLK2Q6UY11 383 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 LINC00301Q8NCQ3 95 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 RASGRP4Q8TDF6 673 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 RTEL1Q9NZ71 1219 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 TOB1P50616 345 aaPredicted RBP15.32■□□□□ 0.04
UBA3-201ENST00000349511 ANO1Q5XXA6 986 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 C11orf57Q6ZUT1 292 aaPredicted RBP15.32■□□□□ 0.04
UBA3-201ENST00000349511 MKL1Q969V6 931 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 LZTS2Q9BRK4 669 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 SPZ1Q9BXG8 430 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 FOXP1Q9H334 677 aaPredicted RBP15.32■□□□□ 0.04
UBA3-201ENST00000349511 GGA3Q9NZ52 723 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 ZBTB21Q9ULJ3 1066 aa15.32■□□□□ 0.04
UBA3-201ENST00000349511 SNW1Q13573 536 aaKnown RBP15.31■□□□□ 0.04
UBA3-201ENST00000349511 ASPRV1Q53RT3 343 aa15.31■□□□□ 0.04
UBA3-201ENST00000349511 ADGRF4Q8IZF3 695 aa15.31■□□□□ 0.04
UBA3-201ENST00000349511 RRP36Q96EU6 259 aaKnown RBP15.31■□□□□ 0.04
UBA3-201ENST00000349511 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
UBA3-201ENST00000349511 GLIS2Q9BZE0 524 aaPredicted RBP15.31■□□□□ 0.04
UBA3-201ENST00000349511 SEC63Q9UGP8 760 aaKnown RBP15.31■□□□□ 0.04
UBA3-201ENST00000349511 POLR2AP24928 1970 aaKnown RBP15.31■□□□□ 0.04
UBA3-201ENST00000349511 GOLGA6L19H0YKK7 550 aa15.31■□□□□ 0.04
UBA3-201ENST00000349511 CDC25BP30305 580 aa15.31■□□□□ 0.04
UBA3-201ENST00000349511 CAP2P40123 477 aa15.31■□□□□ 0.04
UBA3-201ENST00000349511 SNAP25P60880 206 aa15.31■□□□□ 0.04
UBA3-201ENST00000349511 STX1AQ16623 288 aa15.31■□□□□ 0.04
UBA3-201ENST00000349511 ATL3Q6DD88 541 aa15.31■□□□□ 0.04
UBA3-201ENST00000349511 COA7Q96BR5 231 aa15.31■□□□□ 0.04
UBA3-201ENST00000349511 RIOX1Q9H6W3 641 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms