RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 PNMA6FA0A0J9YX94 578 aa21.41■■□□□ 1.02
PTN-201ENST00000348225 LETM1O95202 739 aaPredicted RBP21.41■■□□□ 1.02
PTN-201ENST00000348225 GNA11P29992 359 aa21.41■■□□□ 1.02
PTN-201ENST00000348225 ADALQ6DHV7 355 aa21.41■■□□□ 1.02
PTN-201ENST00000348225 TTBK2Q6IQ55 1244 aa21.41■■□□□ 1.02
PTN-201ENST00000348225 TYW1BQ6NUM6 668 aa21.41■■□□□ 1.02
PTN-201ENST00000348225 PPP1R18Q6NYC8 613 aa21.41■■□□□ 1.02
PTN-201ENST00000348225 JMJD4Q9H9V9 463 aa21.41■■□□□ 1.02
PTN-201ENST00000348225 C6orf50Q9HD87 102 aa21.41■■□□□ 1.02
PTN-201ENST00000348225 PITPNM2Q9BZ72 1349 aa21.41■■□□□ 1.02
PTN-201ENST00000348225 A0A1W2PQ27 194 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 A0A1W2PQ64 194 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 A0A1W2PQD8 194 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 A0A1W2PRG0 241 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 PHF20L1A8MW92 1017 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 BMP3P12645 472 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 TRAPPC10P48553 1259 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 TOB1P50616 345 aaPredicted RBP21.4■■□□□ 1.02
PTN-201ENST00000348225 PTPAQ15257 358 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 GPR162Q16538 588 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 CCDC73Q6ZRK6 1079 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 ZNF341Q9BYN7 854 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 ZMYND12Q9H0C1 365 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 DDX19AQ9NUU7 478 aaKnown RBP21.4■■□□□ 1.02
PTN-201ENST00000348225 ESYT2A0FGR8 921 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 TRIM75PA6NK02 468 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 ZBTB5O15062 677 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 LIG1P18858 919 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 SLC16A2P36021 539 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 DPY19L2Q6NUT2 758 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 CCAR1Q8IX12 1150 aaKnown RBP21.4■■□□□ 1.02
PTN-201ENST00000348225 MTMR8Q96EF0 704 aa21.4■■□□□ 1.02
PTN-201ENST00000348225 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.4■■□□□ 1.02
PTN-201ENST00000348225 ZC3H4Q9UPT8 1303 aaKnown RBP21.39■■□□□ 1.01
PTN-201ENST00000348225 GOLGA6L3A6NEY3 463 aa21.39■■□□□ 1.01
PTN-201ENST00000348225 CTNND1O60716 968 aaKnown RBP21.39■■□□□ 1.01
PTN-201ENST00000348225 BMP15O95972 392 aa21.39■■□□□ 1.01
PTN-201ENST00000348225 ECE1P42892 770 aa21.39■■□□□ 1.01
PTN-201ENST00000348225 NBPF12Q5TAG4 269 aaPredicted RBP21.39■■□□□ 1.01
PTN-201ENST00000348225 ACER1Q8TDN7 264 aa21.39■■□□□ 1.01
PTN-201ENST00000348225 MRPS27Q92552 414 aaKnown RBP21.39■■□□□ 1.01
PTN-201ENST00000348225 SMCO2A6NFE2 343 aa21.38■■□□□ 1.01
PTN-201ENST00000348225 USP17L10C9JJH3 530 aa21.38■■□□□ 1.01
PTN-201ENST00000348225 GRIN3BO60391 1043 aa21.38■■□□□ 1.01
PTN-201ENST00000348225 HIRAP54198 1017 aaPredicted RBP21.38■■□□□ 1.01
PTN-201ENST00000348225 IKQ13123 557 aaPredicted RBP21.38■■□□□ 1.01
PTN-201ENST00000348225 PIK3AP1Q6ZUJ8 805 aa21.38■■□□□ 1.01
PTN-201ENST00000348225 MORC2Q9Y6X9 1032 aaPredicted RBP21.38■■□□□ 1.01
PTN-201ENST00000348225 CCDC194A0A1B0GVG4 234 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 SYCE3A1L190 88 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 EARS2Q5JPH6 523 aaKnown RBP21.37■■□□□ 1.01
PTN-201ENST00000348225 FSIP1Q8NA03 581 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 VCPKMTQ9H867 229 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 DACT1Q9NYF0 836 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 PCDHB6Q9Y5E3 794 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 DOCK1Q14185 1865 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 FAM205CA6NFA0 338 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 M0R2N6 131 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 ATP2B1P20020 1258 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 MARCKSP29966 332 aaPredicted RBP21.37■■□□□ 1.01
PTN-201ENST00000348225 TTC38Q5R3I4 469 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 SYDE2Q5VT97 1194 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 BTNL9Q6UXG8 535 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 NUP88Q99567 741 aaPredicted RBP21.37■■□□□ 1.01
PTN-201ENST00000348225 NUP62CLQ9H1M0 184 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 PCDHA6Q9UN73 950 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 PCDHA8Q9Y5H6 950 aa21.37■■□□□ 1.01
PTN-201ENST00000348225 TMEM232C9JQI7 657 aa21.36■■□□□ 1.01
PTN-201ENST00000348225 CUTAO60888 179 aa21.36■■□□□ 1.01
PTN-201ENST00000348225 FAM160A1Q05DH4 1040 aa21.36■■□□□ 1.01
PTN-201ENST00000348225 CDC37Q16543 378 aaPredicted RBP21.36■■□□□ 1.01
PTN-201ENST00000348225 SUPT20HL1Q3ZLR7 823 aa21.36■■□□□ 1.01
PTN-201ENST00000348225 LRSAM1Q6UWE0 723 aa21.36■■□□□ 1.01
PTN-201ENST00000348225 KRT25Q7Z3Z0 450 aa21.36■■□□□ 1.01
PTN-201ENST00000348225 KRI1Q8N9T8 703 aaKnown RBP21.36■■□□□ 1.01
PTN-201ENST00000348225 FEZ1Q99689 392 aa21.36■■□□□ 1.01
PTN-201ENST00000348225 UTRNP46939 3433 aa21.36■■□□□ 1.01
PTN-201ENST00000348225 FSD2A1L4K1 749 aa21.35■■□□□ 1.01
PTN-201ENST00000348225 NR1I2O75469 434 aa21.35■■□□□ 1.01
PTN-201ENST00000348225 CMA1P23946 247 aa21.35■■□□□ 1.01
PTN-201ENST00000348225 DEKP35659 375 aaKnown RBP21.35■■□□□ 1.01
PTN-201ENST00000348225 ADCY7P51828 1080 aa21.35■■□□□ 1.01
PTN-201ENST00000348225 STAT2P52630 851 aa21.35■■□□□ 1.01
PTN-201ENST00000348225 AXDND1Q5T1B0 1012 aaPredicted RBP21.35■■□□□ 1.01
PTN-201ENST00000348225 L1TD1Q5T7N2 865 aaKnown RBP21.35■■□□□ 1.01
PTN-201ENST00000348225 SPICE1Q8N0Z3 855 aa21.35■■□□□ 1.01
PTN-201ENST00000348225 COA7Q96BR5 231 aa21.35■■□□□ 1.01
PTN-201ENST00000348225 L3MBTL3Q96JM7 780 aaPredicted RBP21.35■■□□□ 1.01
PTN-201ENST00000348225 ZNF112Q9UJU3 913 aa21.35■■□□□ 1.01
PTN-201ENST00000348225 QRICH1Q2TAL8 776 aa21.34■■□□□ 1.01
PTN-201ENST00000348225 REXO1Q8N1G1 1221 aaKnown RBP21.34■■□□□ 1.01
PTN-201ENST00000348225 DCPSQ96C86 337 aaKnown RBP21.34■■□□□ 1.01
PTN-201ENST00000348225 GLT8D2Q9H1C3 349 aa21.34■■□□□ 1.01
PTN-201ENST00000348225 GOLPH3LQ9H4A5 285 aa21.34■■□□□ 1.01
PTN-201ENST00000348225 CLSTN2Q9H4D0 955 aa21.34■■□□□ 1.01
PTN-201ENST00000348225 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.34■■□□□ 1.01
PTN-201ENST00000348225 NOM1Q5C9Z4 860 aaKnown RBP21.33■■□□□ 1.01
PTN-201ENST00000348225 SCYL3Q8IZE3 742 aa21.33■■□□□ 1.01
PTN-201ENST00000348225 RASGRP4Q8TDF6 673 aa21.33■■□□□ 1.01
PTN-201ENST00000348225 ADAMTS3O15072 1205 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms