RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 RAPGEF1Q13905 1077 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 DLGAP5Q15398 846 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 FAM47AQ5JRC9 791 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 BARGINQ6ZT62 677 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 MB21D2Q8IYB1 491 aaPredicted RBP16.41■□□□□ 0.22
NUP50-201ENST00000347635 CCDC24Q8N4L8 307 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 RGS22Q8NE09 1264 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 TRIM58Q8NG06 486 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 KCNB2Q92953 911 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 NARFQ9UHQ1 456 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 TYW1BQ6NUM6 668 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 TSKSQ9UJT2 592 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 TMEM232C9JQI7 657 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 POTEJP0CG39 1038 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 PRPHP41219 470 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 TXKP42681 527 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 BCAMP50895 628 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 NR5A1Q13285 461 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 MFSD14BQ5SR56 506 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 TOGARAM2Q6ZUX3 1019 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 SMYD4Q8IYR2 804 aaPredicted RBP16.4■□□□□ 0.22
NUP50-201ENST00000347635 SYCP3Q8IZU3 236 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 BLIDQ8IZY5 108 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 GSTTP1A0A1W2PQM5 241 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 SPDYE3A6NKU9 549 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 SCG2P13521 617 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 LIFRP42702 1097 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 CCDC65Q8IXS2 484 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 PPEF1O14829 653 aaPredicted RBP16.4■□□□□ 0.22
NUP50-201ENST00000347635 ARID4AP29374 1257 aaPredicted RBP16.4■□□□□ 0.22
NUP50-201ENST00000347635 SLC9C1Q4G0N8 1177 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 PSMB7Q99436 277 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 PCDHB6Q9Y5E3 794 aa16.4■□□□□ 0.22
NUP50-201ENST00000347635 ARHGAP23Q9P227 1491 aa16.39■□□□□ 0.21
NUP50-201ENST00000347635 CCDC84Q86UT8 332 aaPredicted RBP16.39■□□□□ 0.21
NUP50-201ENST00000347635 IPO4Q8TEX9 1081 aaKnown RBP16.39■□□□□ 0.21
NUP50-201ENST00000347635 PICK1Q9NRD5 415 aa16.39■□□□□ 0.21
NUP50-201ENST00000347635 COBLO75128 1261 aa16.39■□□□□ 0.21
NUP50-201ENST00000347635 LONP1P36776 959 aaKnown RBP16.39■□□□□ 0.21
NUP50-201ENST00000347635 ZSWIM5Q9P217 1185 aa16.39■□□□□ 0.21
NUP50-201ENST00000347635 CFAP221Q4G0U5 840 aa16.39■□□□□ 0.21
NUP50-201ENST00000347635 VWA3BQ502W6 1294 aa16.39■□□□□ 0.21
NUP50-201ENST00000347635 CTNNBL1Q8WYA6 563 aaPredicted RBP16.39■□□□□ 0.21
NUP50-201ENST00000347635 INPP5BP32019 993 aa16.39■□□□□ 0.21
NUP50-201ENST00000347635 PLCD4Q9BRC7 762 aa16.39■□□□□ 0.21
NUP50-201ENST00000347635 NSRP1Q9H0G5 558 aaKnown RBP16.39■□□□□ 0.21
NUP50-201ENST00000347635 CPDO75976 1380 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 GTF2IP78347 998 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 PAK2Q13177 524 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 MSL1Q68DK7 614 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 EXOC4Q96A65 974 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 FAM207AQ9NSI2 230 aaPredicted RBP16.38■□□□□ 0.21
NUP50-201ENST00000347635 SAP30BPQ9UHR5 308 aaKnown RBP16.38■□□□□ 0.21
NUP50-201ENST00000347635 ACRBPQ8NEB7 543 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 UBLCP1Q8WVY7 318 aaPredicted RBP16.38■□□□□ 0.21
NUP50-201ENST00000347635 LRWD1Q9UFC0 647 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 TAF6LQ9Y6J9 622 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 CDHR2Q9BYE9 1310 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 USP17L21D6R901 530 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 ERFEQ4G0M1 354 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 ANKS4BQ8N8V4 417 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 PIH1D3Q9NQM4 214 aaKnown RBP16.38■□□□□ 0.21
NUP50-201ENST00000347635 KIF28PB7ZC32 967 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 KRT13P13646 458 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 TBC1D10CQ8IV04 446 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 RABEP2Q9H5N1 569 aa16.38■□□□□ 0.21
NUP50-201ENST00000347635 ASIC2Q16515 512 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 GRIPAP1Q4V328 841 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 SPATA31A1Q5TZJ5 1347 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 CYP19A1P11511 503 aaPredicted RBP16.37■□□□□ 0.21
NUP50-201ENST00000347635 ACTN2P35609 894 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 STMN4Q9H169 189 aaPredicted RBP16.37■□□□□ 0.21
NUP50-201ENST00000347635 FAM204AQ9H8W3 233 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 NPR1P16066 1061 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 HPDP32754 393 aaPredicted RBP16.37■□□□□ 0.21
NUP50-201ENST00000347635 KCNJ6P48051 423 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 E4F1Q66K89 784 aaPredicted RBP16.37■□□□□ 0.21
NUP50-201ENST00000347635 CC2D1AQ6P1N0 951 aaPredicted RBP16.37■□□□□ 0.21
NUP50-201ENST00000347635 RRAGAQ7L523 313 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 DYMQ7RTS9 669 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 PAGE5Q96GU1 130 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 TFAP4Q01664 338 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 CPLX4Q7Z7G2 160 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 CCDC114Q96M63 670 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 RWDD2AQ9UIY3 292 aa16.37■□□□□ 0.21
NUP50-201ENST00000347635 STK36Q9NRP7 1315 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 GOLGA8KD6RF30 607 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 AP5Z1O43299 807 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 MCAMP43121 646 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 TRAPPC10P48553 1259 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 CYB5R4Q7L1T6 521 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 SELENOSQ9BQE4 189 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 HYOU1Q9Y4L1 999 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 PLEKHG2Q9H7P9 1386 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 VGLL3A8MV65 326 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 ZSCAN20P17040 1043 aaPredicted RBP16.36■□□□□ 0.21
NUP50-201ENST00000347635 GYG1P46976 350 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms