RNA–Protein interactions for RNA: ENST00000346606.10

CSHL1-203, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-203ENST00000346606 PRDM12Q9H4Q4 367 aa17.54■□□□□ 0.4
CSHL1-203ENST00000346606 CNPY2Q9Y2B0 182 aa17.54■□□□□ 0.4
CSHL1-203ENST00000346606 DNAJC25-GNG10A0A024R161 153 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 MOXD2PA6NHM9 499 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 USP17L12C9JPN9 530 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 USP17L21D6R901 530 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 MBD4O95243 580 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 CSF2RAP15509 400 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 MAMDC4Q6UXC1 1216 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 C16orf86Q6ZW13 317 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 ERC1Q8IUD2 1116 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 RHPN1Q8TCX5 695 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.53■□□□□ 0.4
CSHL1-203ENST00000346606 NUP133Q8WUM0 1156 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 NUP88Q99567 741 aaPredicted RBP17.53■□□□□ 0.4
CSHL1-203ENST00000346606 ATP8A2Q9NTI2 1148 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 FAM184BQ9ULE4 1060 aa17.53■□□□□ 0.4
CSHL1-203ENST00000346606 NAV1Q8NEY1 1877 aa17.52■□□□□ 0.4
CSHL1-203ENST00000346606 DUSP11O75319 330 aaKnown RBP17.52■□□□□ 0.4
CSHL1-203ENST00000346606 ACRP10323 421 aa17.52■□□□□ 0.4
CSHL1-203ENST00000346606 AKNAD1Q5T1N1 836 aa17.52■□□□□ 0.4
CSHL1-203ENST00000346606 MSL3Q8N5Y2 521 aaKnown RBP17.52■□□□□ 0.4
CSHL1-203ENST00000346606 ATXN2LQ8WWM7 1075 aaKnown RBP17.52■□□□□ 0.4
CSHL1-203ENST00000346606 FGD4Q96M96 766 aa17.52■□□□□ 0.4
CSHL1-203ENST00000346606 ASB2Q96Q27 587 aa17.52■□□□□ 0.4
CSHL1-203ENST00000346606 KANSL2Q9H9L4 492 aa17.52■□□□□ 0.4
CSHL1-203ENST00000346606 ZHX1Q9UKY1 873 aaPredicted RBP17.52■□□□□ 0.4
CSHL1-203ENST00000346606 ELP1O95163 1332 aa17.51■□□□□ 0.39
CSHL1-203ENST00000346606 SYNGAP1Q96PV0 1343 aa17.51■□□□□ 0.39
CSHL1-203ENST00000346606 CST5P28325 142 aaPredicted RBP17.51■□□□□ 0.39
CSHL1-203ENST00000346606 ADD2P35612 726 aa17.51■□□□□ 0.39
CSHL1-203ENST00000346606 PPIGQ13427 754 aaKnown RBP eCLIP17.51■□□□□ 0.39
CSHL1-203ENST00000346606 ZNF365Q70YC5 407 aa17.51■□□□□ 0.39
CSHL1-203ENST00000346606 COG6Q9Y2V7 657 aa17.51■□□□□ 0.39
CSHL1-203ENST00000346606 CTAGE5O15320 804 aa17.5■□□□□ 0.39
CSHL1-203ENST00000346606 ASGR1P07306 291 aa17.5■□□□□ 0.39
CSHL1-203ENST00000346606 COPB2P35606 906 aa17.5■□□□□ 0.39
CSHL1-203ENST00000346606 SNRNP48Q6IEG0 339 aaKnown RBP17.5■□□□□ 0.39
CSHL1-203ENST00000346606 CCDC129Q6ZRS4 1044 aa17.5■□□□□ 0.39
CSHL1-203ENST00000346606 FAM126BQ8IXS8 530 aa17.5■□□□□ 0.39
CSHL1-203ENST00000346606 GLT1D1Q96MS3 346 aa17.5■□□□□ 0.39
CSHL1-203ENST00000346606 GAS2L1Q99501 681 aaPredicted RBP17.5■□□□□ 0.39
CSHL1-203ENST00000346606 TEX13BQ9BXU2 312 aa17.5■□□□□ 0.39
CSHL1-203ENST00000346606 PPP1R12CQ9BZL4 782 aa17.5■□□□□ 0.39
CSHL1-203ENST00000346606 GOPCQ9HD26 462 aa17.5■□□□□ 0.39
CSHL1-203ENST00000346606 CXXC1Q9P0U4 656 aaPredicted RBP17.5■□□□□ 0.39
CSHL1-203ENST00000346606 XIRP2A4UGR9 3374 aa17.49■□□□□ 0.39
CSHL1-203ENST00000346606 CHD7Q9P2D1 2997 aa17.49■□□□□ 0.39
CSHL1-203ENST00000346606 ARVCFO00192 962 aa17.49■□□□□ 0.39
CSHL1-203ENST00000346606 RAD21O60216 631 aa17.49■□□□□ 0.39
CSHL1-203ENST00000346606 C6orf222P0C671 652 aaPredicted RBP17.49■□□□□ 0.39
CSHL1-203ENST00000346606 ACVR2BQ13705 512 aa17.49■□□□□ 0.39
CSHL1-203ENST00000346606 CCDC85BQ15834 202 aaPredicted RBP17.49■□□□□ 0.39
CSHL1-203ENST00000346606 CTR9Q6PD62 1173 aa17.49■□□□□ 0.39
CSHL1-203ENST00000346606 ADAMTS19Q8TE59 1207 aa17.49■□□□□ 0.39
CSHL1-203ENST00000346606 SLF1Q9BQI6 1058 aa17.49■□□□□ 0.39
CSHL1-203ENST00000346606 UPF3AQ9H1J1 476 aaKnown RBP17.49■□□□□ 0.39
CSHL1-203ENST00000346606 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.49■□□□□ 0.39
CSHL1-203ENST00000346606 THEGQ9P2T0 379 aa17.49■□□□□ 0.39
CSHL1-203ENST00000346606 DDX19BQ9UMR2 479 aa17.49■□□□□ 0.39
CSHL1-203ENST00000346606 APBB1O00213 710 aa17.48■□□□□ 0.39
CSHL1-203ENST00000346606 GJA9P57773 515 aa17.48■□□□□ 0.39
CSHL1-203ENST00000346606 ZNF467Q7Z7K2 595 aaPredicted RBP17.48■□□□□ 0.39
CSHL1-203ENST00000346606 DDX11Q96FC9 970 aa17.48■□□□□ 0.39
CSHL1-203ENST00000346606 KATNBL1Q9H079 304 aa17.48■□□□□ 0.39
CSHL1-203ENST00000346606 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
CSHL1-203ENST00000346606 PAG1Q9NWQ8 432 aa17.48■□□□□ 0.39
CSHL1-203ENST00000346606 YBX2Q9Y2T7 364 aaKnown RBP17.48■□□□□ 0.39
CSHL1-203ENST00000346606 PARP14Q460N5 1801 aa17.48■□□□□ 0.39
CSHL1-203ENST00000346606 MROH7Q68CQ1 1323 aa17.47■□□□□ 0.39
CSHL1-203ENST00000346606 F5H6K3 240 aa17.47■□□□□ 0.39
CSHL1-203ENST00000346606 NDUFB10O96000 172 aa17.47■□□□□ 0.39
CSHL1-203ENST00000346606 CD4P01730 458 aa17.47■□□□□ 0.39
CSHL1-203ENST00000346606 CYP2C18P33260 490 aa17.47■□□□□ 0.39
CSHL1-203ENST00000346606 KLRC3Q07444 240 aa17.47■□□□□ 0.39
CSHL1-203ENST00000346606 CCDC144BQ3MJ40 725 aa17.47■□□□□ 0.39
CSHL1-203ENST00000346606 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
CSHL1-203ENST00000346606 CLASRPQ8N2M8 674 aaKnown RBP17.47■□□□□ 0.39
CSHL1-203ENST00000346606 TMEM199Q8N511 208 aa17.47■□□□□ 0.39
CSHL1-203ENST00000346606 PCSK9Q8NBP7 692 aaKnown RBP17.47■□□□□ 0.39
CSHL1-203ENST00000346606 HERVK_113Q902F9 699 aa17.47■□□□□ 0.39
CSHL1-203ENST00000346606 VTI1AQ96AJ9 217 aa17.47■□□□□ 0.39
CSHL1-203ENST00000346606 A0A0U1RQG5 324 aaPredicted RBP17.46■□□□□ 0.39
CSHL1-203ENST00000346606 ATP2A1O14983 1001 aa17.46■□□□□ 0.39
CSHL1-203ENST00000346606 IFIT2P09913 472 aaKnown RBP17.46■□□□□ 0.39
CSHL1-203ENST00000346606 IGFBP4P22692 258 aa17.46■□□□□ 0.39
CSHL1-203ENST00000346606 SLC4A3P48751 1232 aa17.46■□□□□ 0.39
CSHL1-203ENST00000346606 MRPS5P82675 430 aaKnown RBP17.46■□□□□ 0.39
CSHL1-203ENST00000346606 GNASQ5JWF2 1037 aa17.46■□□□□ 0.39
CSHL1-203ENST00000346606 PSRC1Q6PGN9 363 aaPredicted RBP17.46■□□□□ 0.39
CSHL1-203ENST00000346606 CCDC174Q6PII3 467 aa17.46■□□□□ 0.39
CSHL1-203ENST00000346606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.46■□□□□ 0.39
CSHL1-203ENST00000346606 SIRT2Q8IXJ6 389 aa17.46■□□□□ 0.39
CSHL1-203ENST00000346606 CPXCR1Q8N123 301 aa17.46■□□□□ 0.39
CSHL1-203ENST00000346606 KIF1BPQ96EK5 621 aa17.46■□□□□ 0.39
CSHL1-203ENST00000346606 UHRF1Q96T88 793 aaPredicted RBP17.46■□□□□ 0.39
CSHL1-203ENST00000346606 BCL11AQ9H165 835 aa17.46■□□□□ 0.39
CSHL1-203ENST00000346606 NKX2-4Q9H2Z4 354 aa17.46■□□□□ 0.39
CSHL1-203ENST00000346606 CHMP4BQ9H444 224 aaKnown RBP17.46■□□□□ 0.39
CSHL1-203ENST00000346606 RAVER2Q9HCJ3 691 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms