RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 A0A1W2PQ64 194 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 A0A1W2PQD8 194 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 ECM2O94769 699 aaPredicted RBP17.15■□□□□ 0.34
SRPK1-201ENST00000346162 LRRC45Q96CN5 670 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 SPDL1Q96EA4 605 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 SH2D4BQ5SQS7 431 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 NAP1L4Q99733 375 aaKnown RBP17.15■□□□□ 0.34
SRPK1-201ENST00000346162 H7C1W4 665 aa17.14■□□□□ 0.33
SRPK1-201ENST00000346162 STX10O60499 249 aa17.14■□□□□ 0.33
SRPK1-201ENST00000346162 ELF1P32519 619 aa17.14■□□□□ 0.33
SRPK1-201ENST00000346162 RBM6P78332 1123 aaKnown RBP17.14■□□□□ 0.33
SRPK1-201ENST00000346162 C11orf57Q6ZUT1 292 aaPredicted RBP17.14■□□□□ 0.33
SRPK1-201ENST00000346162 NLRP10Q86W26 655 aa17.14■□□□□ 0.33
SRPK1-201ENST00000346162 JAKMIP2Q96AA8 810 aa17.14■□□□□ 0.33
SRPK1-201ENST00000346162 CLIC6Q96NY7 704 aa17.14■□□□□ 0.33
SRPK1-201ENST00000346162 LZTS2Q9BRK4 669 aa17.14■□□□□ 0.33
SRPK1-201ENST00000346162 TAB2Q9NYJ8 693 aa17.14■□□□□ 0.33
SRPK1-201ENST00000346162 LRWD1Q9UFC0 647 aa17.14■□□□□ 0.33
SRPK1-201ENST00000346162 YIPF3Q9GZM5 350 aa17.14■□□□□ 0.33
SRPK1-201ENST00000346162 CARMIL3Q8ND23 1372 aa17.14■□□□□ 0.33
SRPK1-201ENST00000346162 DIXDC1Q155Q3 683 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 BICD1Q96G01 975 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 ARHGEF40Q8TER5 1519 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 RNASE9P60153 205 aaKnown RBP17.13■□□□□ 0.33
SRPK1-201ENST00000346162 PIK3R5Q8WYR1 880 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 CCDC77Q9BR77 488 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 RCOR1Q9UKL0 485 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 ADD2P35612 726 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 CRKLP46109 303 aaKnown RBP17.13■□□□□ 0.33
SRPK1-201ENST00000346162 HIBCHQ6NVY1 386 aaPredicted RBP17.13■□□□□ 0.33
SRPK1-201ENST00000346162 TSC22D3Q99576 134 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 PUS7LQ9H0K6 701 aaKnown RBP17.13■□□□□ 0.33
SRPK1-201ENST00000346162 BLZF1Q9H2G9 400 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 POLE2P56282 527 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 USP37Q86T82 979 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 LMBR1Q8WVP7 490 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 NCAPD2Q15021 1401 aa17.13■□□□□ 0.33
SRPK1-201ENST00000346162 CEP152O94986 1710 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 ALDH3A1P30838 453 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 SLC39A14Q15043 492 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 MUM1Q2TAK8 710 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 FBXW10Q5XX13 1052 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 FTOQ9C0B1 505 aaKnown RBP eCLIP17.12■□□□□ 0.33
SRPK1-201ENST00000346162 ZMYND10O75800 440 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 KRT71Q3SY84 523 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 CCDC51Q96ER9 411 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 WWC3Q9ULE0 1092 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 A0A087WWV3 80 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 RPL13P26373 211 aaKnown RBP17.12■□□□□ 0.33
SRPK1-201ENST00000346162 ZNF827Q17R98 1081 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 CCDC144BQ3MJ40 725 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 TBC1D22AQ8WUA7 517 aa17.12■□□□□ 0.33
SRPK1-201ENST00000346162 MAP7Q14244 749 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 SNX29Q8TEQ0 813 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 DDX27Q96GQ7 796 aaKnown RBP17.11■□□□□ 0.33
SRPK1-201ENST00000346162 GUCY2FP51841 1108 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 TTLL12Q14166 644 aaPredicted RBP17.11■□□□□ 0.33
SRPK1-201ENST00000346162 REXO1Q8N1G1 1221 aaKnown RBP17.11■□□□□ 0.33
SRPK1-201ENST00000346162 KIF2CQ99661 725 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 SEC31BQ9NQW1 1179 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 DONSONQ9NYP3 566 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 ADCY7P51828 1080 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 GOLGA8FQ08AF8 430 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 GOLGA8DPQ0D2H9 430 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 PNMA1Q8ND90 353 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 NELFBQ8WX92 580 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 POLR3EQ9NVU0 708 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 HOOK3Q86VS8 718 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 PIGBQ92521 554 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 CALR3Q96L12 384 aaKnown RBP17.11■□□□□ 0.33
SRPK1-201ENST00000346162 ZDHHC9Q9Y397 364 aa17.11■□□□□ 0.33
SRPK1-201ENST00000346162 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
SRPK1-201ENST00000346162 PRPHP41219 470 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 SLC1A4P43007 532 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 ARHGEF2Q92974 986 aaKnown RBP17.1■□□□□ 0.33
SRPK1-201ENST00000346162 SMC6Q96SB8 1091 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 PLVAPQ9BX97 442 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 GLT8D2Q9H1C3 349 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 ACTR5Q9H9F9 607 aaPredicted RBP17.1■□□□□ 0.33
SRPK1-201ENST00000346162 FANCLQ9NW38 375 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 ADGRL3Q9HAR2 1447 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 PDE6BP35913 854 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 MFSD14BQ5SR56 506 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 CABP7Q86V35 215 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 SLC35F6Q8N357 371 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 PCDHA5Q9Y5H7 936 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 CTNNA2P26232 953 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 DCAF17Q5H9S7 520 aaPredicted RBP17.1■□□□□ 0.33
SRPK1-201ENST00000346162 DPP8Q6V1X1 898 aaPredicted RBP17.1■□□□□ 0.33
SRPK1-201ENST00000346162 BLIDQ8IZY5 108 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 TCHPQ9BT92 498 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 PTPRMP28827 1452 aa17.1■□□□□ 0.33
SRPK1-201ENST00000346162 RANBP1P43487 201 aa17.09■□□□□ 0.33
SRPK1-201ENST00000346162 SCG2P13521 617 aa17.09■□□□□ 0.33
SRPK1-201ENST00000346162 DYMQ7RTS9 669 aa17.09■□□□□ 0.33
SRPK1-201ENST00000346162 TMEM87AQ8NBN3 555 aa17.09■□□□□ 0.33
SRPK1-201ENST00000346162 LINC00301Q8NCQ3 95 aa17.09■□□□□ 0.33
SRPK1-201ENST00000346162 PPP1R12AO14974 1030 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms