RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 H2AFZP0C0S5 128 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 RASSF7Q02833 373 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 H2AFVQ71UI9 128 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 DPH6Q7L8W6 267 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 UHMK1Q8TAS1 419 aaKnown RBP19.21■□□□□ 0.67
SPAST-202ENST00000345662 LZTS2Q9BRK4 669 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 DNM3Q9UQ16 869 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 EVI5O60447 810 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 PSMD6Q15008 389 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 ZNF622Q969S3 477 aaKnown RBP eCLIP19.21■□□□□ 0.67
SPAST-202ENST00000345662 TRPM2O94759 1503 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 UHRF1BP1LA0JNW5 1464 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 XRCC5P13010 732 aaKnown RBP19.21■□□□□ 0.67
SPAST-202ENST00000345662 FANCBQ8NB91 859 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 RUNDC3BQ96NL0 473 aa19.21■□□□□ 0.67
SPAST-202ENST00000345662 BAG2O95816 211 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 POLR2FP61218 127 aaKnown RBP19.2■□□□□ 0.66
SPAST-202ENST00000345662 HIBCHQ6NVY1 386 aaPredicted RBP19.2■□□□□ 0.66
SPAST-202ENST00000345662 PLXNC1O60486 1568 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 CTNND1O60716 968 aaKnown RBP19.2■□□□□ 0.66
SPAST-202ENST00000345662 ADCY7P51828 1080 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 TRPC3Q13507 836 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 GRK7Q8WTQ7 553 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 FAM212AQ96EL1 285 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 CNOT10Q9H9A5 744 aaKnown RBP19.2■□□□□ 0.66
SPAST-202ENST00000345662 MAN1B1Q9UKM7 699 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 ZNF518AQ6AHZ1 1483 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 EXOC3O60645 756 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 NCAPH2Q6IBW4 605 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 ARHGAP42A6NI28 874 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 NEURL1BA8MQ27 555 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 THAP12O43422 761 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 CYP21A2P08686 494 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 CFAP61Q8NHU2 1237 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 LPIN2Q92539 896 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 NT5C3AQ9H0P0 336 aa19.2■□□□□ 0.66
SPAST-202ENST00000345662 FGAP02671 866 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 PTPROQ16827 1216 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 GPCPD1Q9NPB8 672 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 TYW1Q9NV66 732 aaKnown RBP19.19■□□□□ 0.66
SPAST-202ENST00000345662 ZBTB21Q9ULJ3 1066 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 KIAA0556O60303 1618 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 F8W031 263 aaPredicted RBP19.19■□□□□ 0.66
SPAST-202ENST00000345662 ATP1A3P13637 1013 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 ARHGAP44Q17R89 818 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 SIRT1Q96EB6 747 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 ARHGEF10O15013 1369 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 TNRQ92752 1358 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 B4DLN1 442 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 PDE1CQ14123 709 aaPredicted RBP19.19■□□□□ 0.66
SPAST-202ENST00000345662 USTQ9Y2C2 406 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 KDRP35968 1356 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 GCNT3O95395 438 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 EMBQ6PCB8 327 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 CMTR1Q8N1G2 835 aaKnown RBP19.19■□□□□ 0.66
SPAST-202ENST00000345662 CNOT6LQ96LI5 555 aaKnown RBP19.19■□□□□ 0.66
SPAST-202ENST00000345662 SETDB2Q96T68 719 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 ANKRD2Q9GZV1 360 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 Q9H521 79 aa19.19■□□□□ 0.66
SPAST-202ENST00000345662 ADCY8P40145 1251 aa19.18■□□□□ 0.66
SPAST-202ENST00000345662 ZKSCAN8Q15776 578 aaPredicted RBP19.18■□□□□ 0.66
SPAST-202ENST00000345662 SPATA5Q8NB90 893 aa19.18■□□□□ 0.66
SPAST-202ENST00000345662 SAMSN1Q9NSI8 373 aaKnown RBP19.18■□□□□ 0.66
SPAST-202ENST00000345662 COG7P83436 770 aa19.18■□□□□ 0.66
SPAST-202ENST00000345662 KIF23Q02241 960 aaPredicted RBP19.18■□□□□ 0.66
SPAST-202ENST00000345662 BLIDQ8IZY5 108 aa19.18■□□□□ 0.66
SPAST-202ENST00000345662 MRPL44Q9H9J2 332 aaKnown RBP19.18■□□□□ 0.66
SPAST-202ENST00000345662 VCX3AQ9NNX9 186 aa19.18■□□□□ 0.66
SPAST-202ENST00000345662 NDUFA10O95299 355 aa19.18■□□□□ 0.66
SPAST-202ENST00000345662 LONP1P36776 959 aaKnown RBP19.18■□□□□ 0.66
SPAST-202ENST00000345662 ST5P78524 1137 aa19.18■□□□□ 0.66
SPAST-202ENST00000345662 WHAMMQ8TF30 809 aa19.18■□□□□ 0.66
SPAST-202ENST00000345662 SMTNP53814 917 aa19.18■□□□□ 0.66
SPAST-202ENST00000345662 REXO1Q8N1G1 1221 aaKnown RBP19.18■□□□□ 0.66
SPAST-202ENST00000345662 LRRC8CQ8TDW0 803 aa19.18■□□□□ 0.66
SPAST-202ENST00000345662 OSBPL5Q9H0X9 879 aaPredicted RBP19.18■□□□□ 0.66
SPAST-202ENST00000345662 HMGB1P1B2RPK0 211 aaPredicted RBP19.17■□□□□ 0.66
SPAST-202ENST00000345662 CEBPAP49715 358 aaPredicted RBP19.17■□□□□ 0.66
SPAST-202ENST00000345662 PTGDRQ13258 359 aa19.17■□□□□ 0.66
SPAST-202ENST00000345662 ZCCHC17Q9NP64 241 aaKnown RBP19.17■□□□□ 0.66
SPAST-202ENST00000345662 PFDN1O60925 122 aa19.17■□□□□ 0.66
SPAST-202ENST00000345662 TAF11Q15544 211 aa19.17■□□□□ 0.66
SPAST-202ENST00000345662 GSDMBQ8TAX9 411 aa19.17■□□□□ 0.66
SPAST-202ENST00000345662 FOXP1Q9H334 677 aaPredicted RBP19.17■□□□□ 0.66
SPAST-202ENST00000345662 ARMCX3Q9UH62 379 aaPredicted RBP19.17■□□□□ 0.66
SPAST-202ENST00000345662 IL9RQ01113 521 aa19.17■□□□□ 0.66
SPAST-202ENST00000345662 CCDC144BQ3MJ40 725 aa19.17■□□□□ 0.66
SPAST-202ENST00000345662 ADAT2Q7Z6V5 191 aaKnown RBP19.17■□□□□ 0.66
SPAST-202ENST00000345662 EXOC7Q9UPT5 735 aa19.17■□□□□ 0.66
SPAST-202ENST00000345662 PPARAQ07869 468 aa19.17■□□□□ 0.66
SPAST-202ENST00000345662 MYCT1Q8N699 235 aa19.17■□□□□ 0.66
SPAST-202ENST00000345662 PASKQ96RG2 1323 aa19.17■□□□□ 0.66
SPAST-202ENST00000345662 PHBP35232 272 aa19.16■□□□□ 0.66
SPAST-202ENST00000345662 DDX27Q96GQ7 796 aaKnown RBP19.16■□□□□ 0.66
SPAST-202ENST00000345662 GCP02774 474 aa19.16■□□□□ 0.66
SPAST-202ENST00000345662 PPP1R9AQ9ULJ8 1098 aa19.16■□□□□ 0.66
SPAST-202ENST00000345662 PCDHB13Q9Y5F0 798 aa19.16■□□□□ 0.66
SPAST-202ENST00000345662 ARHGEF35A5YM69 484 aa19.16■□□□□ 0.66
SPAST-202ENST00000345662 CHMP2AO43633 222 aa19.16■□□□□ 0.66
SPAST-202ENST00000345662 DCUN1D2Q6PH85 259 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms