RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 DIP2AQ14689 1571 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 PIGBQ92521 554 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 SLC39A2Q9NP94 309 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 TBC1D7Q9P0N9 293 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 FBXO2Q9UK22 296 aaPredicted RBP17.3■□□□□ 0.36
PTPRU-201ENST00000345512 GOLGA8HP0CJ92 632 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 INPP5BP32019 993 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 KIAA0753Q2KHM9 967 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 TC2NQ8N9U0 490 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 IGDCC4Q8TDY8 1250 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 STAG1Q8WVM7 1258 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 CPDO75976 1380 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 MAP3K9P80192 1104 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 CYP27A1Q02318 531 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 CUL4BQ13620 913 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 CFAP221Q4G0U5 840 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 TCP11X2Q5H9J9 407 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 KLHL7Q8IXQ5 586 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 ARPP21Q9UBL0 812 aaPredicted RBP17.29■□□□□ 0.36
PTPRU-201ENST00000345512 SMCO2A6NFE2 343 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 EEF1GP26641 437 aaKnown RBP17.29■□□□□ 0.36
PTPRU-201ENST00000345512 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
PTPRU-201ENST00000345512 MAP2K1Q02750 393 aaPredicted RBP17.29■□□□□ 0.36
PTPRU-201ENST00000345512 TRMT1LQ7Z2T5 733 aaKnown RBP17.29■□□□□ 0.36
PTPRU-201ENST00000345512 CNOT6LQ96LI5 555 aaKnown RBP17.29■□□□□ 0.36
PTPRU-201ENST00000345512 TEX11Q8IYF3 940 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 ERMNQ8TAM6 284 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 GPCPD1Q9NPB8 672 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 ABHD10Q9NUJ1 306 aa17.29■□□□□ 0.36
PTPRU-201ENST00000345512 GSG1L2A8MUP6 293 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 RAD51AP2Q09MP3 1159 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 ZNF804AQ7Z570 1209 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 MAPKAPK5Q8IW41 473 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 BCAS4Q8TDM0 211 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 MRPL44Q9H9J2 332 aaKnown RBP17.28■□□□□ 0.36
PTPRU-201ENST00000345512 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 BUB1O43683 1085 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 CYP2C19P33261 490 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 GNGT1P63211 74 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 DCAF17Q5H9S7 520 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-201ENST00000345512 NELFCDQ8IXH7 590 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 CCDC65Q8IXS2 484 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 NYXQ9GZU5 481 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 RIPOR2Q9Y4F9 1068 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 DIP2BQ9P265 1576 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 ZBTB22O15209 634 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 REXO1L1PQ8IX06 675 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 TGFBRAP1Q8WUH2 860 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 AGXT2Q9BYV1 514 aa17.28■□□□□ 0.36
PTPRU-201ENST00000345512 BIN2Q9UBW5 565 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-201ENST00000345512 GRIN1Q05586 938 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 NCAPHQ15003 741 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 CALCRLQ16602 461 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 CCDC121Q6ZUS5 278 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 B4GALNT4Q76KP1 1039 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 ILDR1Q86SU0 546 aaPredicted RBP17.27■□□□□ 0.36
PTPRU-201ENST00000345512 REXO1Q8N1G1 1221 aaKnown RBP17.27■□□□□ 0.36
PTPRU-201ENST00000345512 HYOU1Q9Y4L1 999 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 GOLGA6L10A0A0M3HER8 536 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 UBE2Q2LH0YL09 131 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 OR52Z1P0C646 297 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 RFC4P35249 363 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 SSR1P43307 286 aaKnown RBP17.27■□□□□ 0.36
PTPRU-201ENST00000345512 ALX1Q15699 326 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 UBLCP1Q8WVY7 318 aaPredicted RBP17.27■□□□□ 0.36
PTPRU-201ENST00000345512 CUL5Q93034 780 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.27■□□□□ 0.36
PTPRU-201ENST00000345512 MYO5BQ9ULV0 1848 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 TLDC2A0PJX2 215 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 SEMA3EO15041 775 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 H2AFXP16104 143 aaPredicted RBP17.27■□□□□ 0.36
PTPRU-201ENST00000345512 ST5P78524 1137 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 LMBR1Q8WVP7 490 aa17.27■□□□□ 0.36
PTPRU-201ENST00000345512 SIGLEC1Q9BZZ2 1709 aa17.27■□□□□ 0.35
PTPRU-201ENST00000345512 FAM205CA6NFA0 338 aa17.27■□□□□ 0.35
PTPRU-201ENST00000345512 IL6STP40189 918 aaPredicted RBP17.27■□□□□ 0.35
PTPRU-201ENST00000345512 PAK2Q13177 524 aa17.27■□□□□ 0.35
PTPRU-201ENST00000345512 HERC4Q5GLZ8 1057 aaPredicted RBP17.27■□□□□ 0.35
PTPRU-201ENST00000345512 SRGAP2O75044 1071 aa17.26■□□□□ 0.35
PTPRU-201ENST00000345512 TCP1P17987 556 aaKnown RBP17.26■□□□□ 0.35
PTPRU-201ENST00000345512 ATP1A2P50993 1020 aa17.26■□□□□ 0.35
PTPRU-201ENST00000345512 GUCY2FP51841 1108 aa17.26■□□□□ 0.35
PTPRU-201ENST00000345512 RPS8P62241 208 aaKnown RBP17.26■□□□□ 0.35
PTPRU-201ENST00000345512 SYCP3Q8IZU3 236 aa17.26■□□□□ 0.35
PTPRU-201ENST00000345512 LRRN4CLQ8ND94 238 aa17.26■□□□□ 0.35
PTPRU-201ENST00000345512 ANKRD65E5RJM6 399 aa17.26■□□□□ 0.35
PTPRU-201ENST00000345512 HLA-DOAP06340 250 aa17.26■□□□□ 0.35
PTPRU-201ENST00000345512 KLHL30Q0D2K2 578 aa17.26■□□□□ 0.35
PTPRU-201ENST00000345512 TTC19Q6DKK2 380 aaPredicted RBP17.26■□□□□ 0.35
PTPRU-201ENST00000345512 TRIM49BA6NDI0 452 aa17.26■□□□□ 0.35
PTPRU-201ENST00000345512 KLRF2D3W0D1 207 aa17.26■□□□□ 0.35
PTPRU-201ENST00000345512 CPLX4Q7Z7G2 160 aa17.26■□□□□ 0.35
PTPRU-201ENST00000345512 GCOM1H8Y6P7 765 aaPredicted RBP17.25■□□□□ 0.35
PTPRU-201ENST00000345512 MYO1CO00159 1063 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 CEP104O60308 925 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 MYZAPP0CAP1 466 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 PCP11498 1178 aaKnown RBP17.25■□□□□ 0.35
PTPRU-201ENST00000345512 NEFHP12036 1026 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 CCT5P48643 541 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms