RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 GPATCH4Q5T3I0 446 aaKnown RBP24.33■■□□□ 1.49
SMARCB1-202ENST00000344921 WDR78Q5VTH9 848 aa24.33■■□□□ 1.49
SMARCB1-202ENST00000344921 TTBK2Q6IQ55 1244 aa24.33■■□□□ 1.49
SMARCB1-202ENST00000344921 ADAMTS5Q9UNA0 930 aa24.33■■□□□ 1.49
SMARCB1-202ENST00000344921 PARP1P09874 1014 aaKnown RBP24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 CTGFP29279 349 aa24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 CAP1Q01518 475 aa24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 EXOSC10Q01780 885 aaKnown RBP24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 OTOP1Q7RTM1 612 aa24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 TRIM47Q96LD4 638 aa24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 SPATC1LQ9H0A9 340 aa24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 PLA2G6O60733 806 aa24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 HOXD10P28358 340 aa24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 TMEM132BQ14DG7 1078 aa24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 COA7Q96BR5 231 aa24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 WDR19Q8NEZ3 1342 aa24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 ZSWIM8A7E2V4 1837 aa24.32■■□□□ 1.48
SMARCB1-202ENST00000344921 COL11A1P12107 1806 aaPredicted RBP24.31■■□□□ 1.48
SMARCB1-202ENST00000344921 LIFRP42702 1097 aa24.31■■□□□ 1.48
SMARCB1-202ENST00000344921 SLC4A3P48751 1232 aa24.31■■□□□ 1.48
SMARCB1-202ENST00000344921 ASPRV1Q53RT3 343 aa24.31■■□□□ 1.48
SMARCB1-202ENST00000344921 CPXCR1Q8N123 301 aa24.31■■□□□ 1.48
SMARCB1-202ENST00000344921 NUP133Q8WUM0 1156 aa24.31■■□□□ 1.48
SMARCB1-202ENST00000344921 PORCNQ9H237 461 aa24.31■■□□□ 1.48
SMARCB1-202ENST00000344921 PRR12Q9ULL5 1215 aa24.31■■□□□ 1.48
SMARCB1-202ENST00000344921 MGAMO43451 1857 aa24.31■■□□□ 1.48
SMARCB1-202ENST00000344921 GNRH1P01148 92 aa24.3■■□□□ 1.48
SMARCB1-202ENST00000344921 FDX1P10109 184 aa24.3■■□□□ 1.48
SMARCB1-202ENST00000344921 MAPK4P31152 587 aa24.3■■□□□ 1.48
SMARCB1-202ENST00000344921 A0A0G2JMZ2 1700 aa24.3■■□□□ 1.48
SMARCB1-202ENST00000344921 SYDE2Q5VT97 1194 aa24.3■■□□□ 1.48
SMARCB1-202ENST00000344921 ZNF654Q8IZM8 581 aa24.3■■□□□ 1.48
SMARCB1-202ENST00000344921 MOV10L1Q9BXT6 1211 aaKnown RBP24.3■■□□□ 1.48
SMARCB1-202ENST00000344921 SLC38A10Q9HBR0 1119 aa24.3■■□□□ 1.48
SMARCB1-202ENST00000344921 SLC12A7Q9Y666 1083 aa24.3■■□□□ 1.48
SMARCB1-202ENST00000344921 DHX16O60231 1041 aaKnown RBP24.29■■□□□ 1.48
SMARCB1-202ENST00000344921 RPS6KB1P23443 525 aa24.29■■□□□ 1.48
SMARCB1-202ENST00000344921 STAT3P40763 770 aa24.29■■□□□ 1.48
SMARCB1-202ENST00000344921 BTNL9Q6UXG8 535 aa24.29■■□□□ 1.48
SMARCB1-202ENST00000344921 SYNE3Q6ZMZ3 975 aa24.29■■□□□ 1.48
SMARCB1-202ENST00000344921 NCAPG2Q86XI2 1143 aa24.29■■□□□ 1.48
SMARCB1-202ENST00000344921 MYL10Q9BUA6 226 aa24.29■■□□□ 1.48
SMARCB1-202ENST00000344921 UBA5Q9GZZ9 404 aa24.29■■□□□ 1.48
SMARCB1-202ENST00000344921 RAVER2Q9HCJ3 691 aaKnown RBP24.29■■□□□ 1.48
SMARCB1-202ENST00000344921 CYP46A1Q9Y6A2 500 aa24.29■■□□□ 1.48
SMARCB1-202ENST00000344921 SNAP25P60880 206 aa24.28■■□□□ 1.48
SMARCB1-202ENST00000344921 TROAPQ12815 778 aa24.28■■□□□ 1.48
SMARCB1-202ENST00000344921 SNRNP48Q6IEG0 339 aaKnown RBP24.28■■□□□ 1.48
SMARCB1-202ENST00000344921 Q6ZUG5 572 aa24.28■■□□□ 1.48
SMARCB1-202ENST00000344921 RUFY3Q7L099 469 aa24.28■■□□□ 1.48
SMARCB1-202ENST00000344921 ZNF214Q9UL59 606 aaPredicted RBP24.28■■□□□ 1.48
SMARCB1-202ENST00000344921 ANAPC15P60006 121 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 PKN2Q16513 984 aaKnown RBP24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 CCDC174Q6PII3 467 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 REPS2Q8NFH8 660 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 TEX13BQ9BXU2 312 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 CPVLQ9H3G5 476 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 ZSWIM6Q9HCJ5 1215 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 NAP1L2Q9ULW6 460 aaPredicted RBP24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 IVNS1ABPQ9Y6Y0 642 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 DDAH1O94760 285 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 ERCC3P19447 782 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 GRM4Q14833 912 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 GPR142Q7Z601 462 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 PLEKHH3Q7Z736 793 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 SGMS1Q86VZ5 419 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 STAG2Q8N3U4 1231 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 CTCFLQ8NI51 663 aaPredicted RBP24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 UPF3BQ9BZI7 483 aaKnown RBP24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 TM6SF1Q9BZW5 370 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 SRRDQ9UH36 339 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 MAD2L2Q9UI95 211 aa24.27■■□□□ 1.48
SMARCB1-202ENST00000344921 KLRF2D3W0D1 207 aa24.26■■□□□ 1.47
SMARCB1-202ENST00000344921 SLC25A27O95847 323 aa24.26■■□□□ 1.47
SMARCB1-202ENST00000344921 RIOX2Q8IUF8 465 aa24.26■■□□□ 1.47
SMARCB1-202ENST00000344921 MCOLN1Q9GZU1 580 aa24.26■■□□□ 1.47
SMARCB1-202ENST00000344921 UPF2Q9HAU5 1272 aaKnown RBP24.26■■□□□ 1.47
SMARCB1-202ENST00000344921 VAT1LQ9HCJ6 419 aa24.26■■□□□ 1.47
SMARCB1-202ENST00000344921 CALM1P0DP23 149 aa24.25■■□□□ 1.47
SMARCB1-202ENST00000344921 CALM2P0DP24 149 aa24.25■■□□□ 1.47
SMARCB1-202ENST00000344921 CALM3P0DP25 149 aa24.25■■□□□ 1.47
SMARCB1-202ENST00000344921 RXRAP19793 462 aa24.25■■□□□ 1.47
SMARCB1-202ENST00000344921 PRKCZQ05513 592 aa24.25■■□□□ 1.47
SMARCB1-202ENST00000344921 RAB11FIP4Q86YS3 637 aa24.25■■□□□ 1.47
SMARCB1-202ENST00000344921 SHCBP1Q8NEM2 672 aa24.25■■□□□ 1.47
SMARCB1-202ENST00000344921 MROH8Q9H579 483 aa24.25■■□□□ 1.47
SMARCB1-202ENST00000344921 PTPN22Q9Y2R2 807 aa24.25■■□□□ 1.47
SMARCB1-202ENST00000344921 PALM3A6NDB9 673 aaPredicted RBP24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 ATP2A1O14983 1001 aa24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 KIF5BP33176 963 aa24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 OAZ1P54368 228 aa24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 PRMT2P55345 433 aa24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 MICU3Q86XE3 530 aa24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 CCDC144CPQ8IYA2 1237 aa24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 ADGRF4Q8IZF3 695 aa24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 RAET1EQ8TD07 263 aa24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 BRF1Q92994 677 aa24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 GABRQQ9UN88 632 aa24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 COPB2P35606 906 aa24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 FLT3LGP49771 235 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms