RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CDKAL1Q5VV42 579 aa16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 PPFIBP1Q86W92 1011 aa16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 CCDC148Q8NFR7 591 aa16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 L2HGDHQ9H9P8 463 aa16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 BARHL2Q9NY43 387 aa16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 ADD3Q9UEY8 706 aaKnown RBP16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 SOWAHDA6NJG2 315 aa16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 F8W031 263 aaPredicted RBP16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 STX10O60499 249 aa16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 ATP2B4P23634 1241 aa16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 NAPAP54920 295 aa16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 PICALMQ13492 652 aa16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 ARL6IP4Q66PJ3 421 aaKnown RBP16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 RBM17Q96I25 401 aaKnown RBP16.84■□□□□ 0.29
VIPAS39-202ENST00000343765 PALM3A6NDB9 673 aaPredicted RBP16.83■□□□□ 0.29
VIPAS39-202ENST00000343765 RIMBP2O15034 1052 aa16.83■□□□□ 0.29
VIPAS39-202ENST00000343765 RPN1P04843 607 aaKnown RBP16.83■□□□□ 0.29
VIPAS39-202ENST00000343765 CCDC178Q5BJE1 867 aa16.83■□□□□ 0.29
VIPAS39-202ENST00000343765 SEPT12Q8IYM1 358 aa16.83■□□□□ 0.29
VIPAS39-202ENST00000343765 NELFBQ8WX92 580 aa16.83■□□□□ 0.29
VIPAS39-202ENST00000343765 TCP11L1Q9NUJ3 509 aa16.83■□□□□ 0.29
VIPAS39-202ENST00000343765 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.83■□□□□ 0.29
VIPAS39-202ENST00000343765 THSD7AQ9UPZ6 1657 aa16.83■□□□□ 0.29
VIPAS39-202ENST00000343765 M0R2N6 131 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 GNG11P61952 73 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 KMT5BQ4FZB7 885 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 FILIP1LQ4L180 1135 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 FCHSD1Q86WN1 690 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 CEP95Q96GE4 821 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 VPS16Q9H269 839 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 DISC1Q9NRI5 854 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 NAV1Q8NEY1 1877 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 PHLPP2Q6ZVD8 1323 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 SNED1Q8TER0 1413 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 GPR75-ASB3A0A0A6YYF3 556 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 PARP1P09874 1014 aaKnown RBP16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 PAK1Q13153 545 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 LETM2Q2VYF4 491 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 CRY2Q49AN0 593 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 CCDC93Q567U6 631 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 FBXO38Q6PIJ6 1188 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 C16orf86Q6ZW13 317 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 UBA5Q9GZZ9 404 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 ZNF287Q9HBT7 754 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 TAB2Q9NYJ8 693 aa16.83■□□□□ 0.28
VIPAS39-202ENST00000343765 UBA7P41226 1012 aa16.82■□□□□ 0.28
VIPAS39-202ENST00000343765 EIF6P56537 245 aaKnown RBP16.82■□□□□ 0.28
VIPAS39-202ENST00000343765 TBC1D16Q8TBP0 767 aa16.82■□□□□ 0.28
VIPAS39-202ENST00000343765 WDR24Q96S15 920 aa16.82■□□□□ 0.28
VIPAS39-202ENST00000343765 N4BP3O15049 544 aa16.82■□□□□ 0.28
VIPAS39-202ENST00000343765 IL1R1P14778 569 aa16.82■□□□□ 0.28
VIPAS39-202ENST00000343765 RHBDL3P58872 404 aa16.82■□□□□ 0.28
VIPAS39-202ENST00000343765 GTF2IP78347 998 aa16.82■□□□□ 0.28
VIPAS39-202ENST00000343765 KRT31Q15323 416 aa16.82■□□□□ 0.28
VIPAS39-202ENST00000343765 CT47A1Q5JQC4 288 aaPredicted RBP16.82■□□□□ 0.28
VIPAS39-202ENST00000343765 C15orf52Q6ZUT6 534 aaKnown RBP16.82■□□□□ 0.28
VIPAS39-202ENST00000343765 PYM1Q9BRP8 204 aaKnown RBP16.82■□□□□ 0.28
VIPAS39-202ENST00000343765 FRMPD2Q68DX3 1309 aaPredicted RBP16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 CASP14P31944 242 aa16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 PRCPP42785 496 aa16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 ZNF397Q8NF99 534 aaPredicted RBP16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 CTAGE1Q96RT6 745 aa16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 AFF2P51816 1311 aa16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 TRIM49BA6NDI0 452 aa16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 CCNT1O60563 726 aaKnown RBP16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 DDR1Q08345 913 aa16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 NAALADL2Q58DX5 795 aa16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 ZNF658Q5TYW1 1059 aaPredicted RBP16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 CLEC10AQ8IUN9 316 aa16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 CERKQ8TCT0 537 aa16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 RWDD2AQ9UIY3 292 aa16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 LY75O60449 1722 aa16.81■□□□□ 0.28
VIPAS39-202ENST00000343765 A0A0U1RQJ8 604 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 SMCO2A6NFE2 343 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 USP17L5A8MUK1 530 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 ADRA2BP18089 450 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 NEDD1Q8NHV4 660 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 ATRIPQ8WXE1 791 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 PIGSQ96S52 555 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 MRPL44Q9H9J2 332 aaKnown RBP16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 SEC63Q9UGP8 760 aaKnown RBP16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 TUBB4AP04350 444 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 PBX1P40424 430 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 RAD9BQ6WBX8 426 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 DAGLBQ8NCG7 672 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 MNS1Q8NEH6 495 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 RRP36Q96EU6 259 aaKnown RBP16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 IRX2Q9BZI1 471 aaPredicted RBP16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 LZTFL1Q9NQ48 299 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 RMND1Q9NWS8 449 aa16.8■□□□□ 0.28
VIPAS39-202ENST00000343765 PES1O00541 588 aaKnown RBP16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 CASQ1P31415 396 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 FXR1P51114 621 aaKnown RBP eCLIP16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 JAKMIP3Q5VZ66 844 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 LRRC47Q8N1G4 583 aaKnown RBP16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 LRRC15Q8TF66 581 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 CARD6Q9BX69 1037 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 PARP3Q9Y6F1 533 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 KCNJ18B7U540 433 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 MFAP3LO75121 409 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms