RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 HSPD1P10809 573 aaKnown RBP5.39□□□□□ -1.55
VAV3-201ENST00000343258 EEF2P13639 858 aaKnown RBP5.39□□□□□ -1.55
VAV3-201ENST00000343258 VCAM1P19320 739 aa5.39□□□□□ -1.55
VAV3-201ENST00000343258 RAD51AP2Q09MP3 1159 aa5.39□□□□□ -1.55
VAV3-201ENST00000343258 Q3C1V9 767 aa5.39□□□□□ -1.55
VAV3-201ENST00000343258 MCMDC2Q4G0Z9 681 aa5.39□□□□□ -1.55
VAV3-201ENST00000343258 SBK1Q52WX2 424 aa5.39□□□□□ -1.55
VAV3-201ENST00000343258 NOM1Q5C9Z4 860 aaKnown RBP5.39□□□□□ -1.55
VAV3-201ENST00000343258 PROCA1Q8NCQ7 364 aaPredicted RBP5.39□□□□□ -1.55
VAV3-201ENST00000343258 SMCR8Q8TEV9 937 aaPredicted RBP5.39□□□□□ -1.55
VAV3-201ENST00000343258 PDLIM2Q96JY6 352 aa5.39□□□□□ -1.55
VAV3-201ENST00000343258 GBP4Q96PP9 640 aa5.39□□□□□ -1.55
VAV3-201ENST00000343258 NAPBQ9H115 298 aa5.39□□□□□ -1.55
VAV3-201ENST00000343258 RASSF4Q9H2L5 321 aa5.39□□□□□ -1.55
VAV3-201ENST00000343258 BMP2KQ9NSY1 1161 aaPredicted RBP5.39□□□□□ -1.55
VAV3-201ENST00000343258 ARPP21Q9UBL0 812 aaPredicted RBP5.39□□□□□ -1.55
VAV3-201ENST00000343258 PTCH2Q9Y6C5 1203 aa5.39□□□□□ -1.55
VAV3-201ENST00000343258 ATAD5Q96QE3 1844 aa5.39□□□□□ -1.55
VAV3-201ENST00000343258 PSMC4P43686 418 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 SOX10P56693 466 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 ICA1Q05084 483 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 PPARAQ07869 468 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 TNPO1Q92973 898 aaKnown RBP5.38□□□□□ -1.55
VAV3-201ENST00000343258 PARK7Q99497 189 aaKnown RBP5.38□□□□□ -1.55
VAV3-201ENST00000343258 NUP88Q99567 741 aaPredicted RBP5.38□□□□□ -1.55
VAV3-201ENST00000343258 AS3MTQ9HBK9 375 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 CABP5Q9NP86 173 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 FBXO28Q9NVF7 368 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 GABRQQ9UN88 632 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 TAF6LQ9Y6J9 622 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 GNAT2P19087 354 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 OSBPP22059 807 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 GYS2P54840 703 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 HNRNPH2P55795 449 aaKnown RBP5.38□□□□□ -1.55
VAV3-201ENST00000343258 HERVK_113P62684 666 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 COL9A3Q14050 684 aaPredicted RBP5.38□□□□□ -1.55
VAV3-201ENST00000343258 DNAJC21Q5F1R6 531 aaKnown RBP5.38□□□□□ -1.55
VAV3-201ENST00000343258 GIMAP6Q6P9H5 292 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 TMEM179Q6ZVK1 233 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 TBC1D10CQ8IV04 446 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 SH3TC2Q8TF17 1288 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 CEP95Q96GE4 821 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 SGSM3Q96HU1 749 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 PAGR1Q9BTK6 254 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 KIAA1683Q9H0B3 1180 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 PORCNQ9H237 461 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 RPAP3Q9H6T3 665 aaPredicted RBP5.38□□□□□ -1.55
VAV3-201ENST00000343258 MKNK2Q9HBH9 465 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 ZCCHC17Q9NP64 241 aaKnown RBP5.38□□□□□ -1.55
VAV3-201ENST00000343258 HELLSQ9NRZ9 838 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 TMOD4Q9NZQ9 345 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 RBPJLQ9UBG7 517 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 SWAP70Q9UH65 585 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 ROBO3Q96MS0 1386 aa5.38□□□□□ -1.55
VAV3-201ENST00000343258 CCDC171Q6TFL3 1326 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 RAD21O60216 631 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 CNMDO75829 334 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 FMNL1O95466 1100 aaPredicted RBP5.37□□□□□ -1.55
VAV3-201ENST00000343258 PRKCZQ05513 592 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 USP17L2Q6R6M4 530 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 LRRC47Q8N1G4 583 aaKnown RBP5.37□□□□□ -1.55
VAV3-201ENST00000343258 ERO1AQ96HE7 468 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 RBSNQ9H1K0 784 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 IL17RBQ9NRM6 502 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 DIAPH3Q9NSV4 1193 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 PTPN22Q9Y2R2 807 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.37□□□□□ -1.55
VAV3-201ENST00000343258 DDX49Q9Y6V7 483 aaKnown RBP5.37□□□□□ -1.55
VAV3-201ENST00000343258 DOCK3Q8IZD9 2030 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 PDE4DIPQ5VU43 2346 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 IGKV6D-41A0A0C4DH26 115 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 C19orf81C9J6K1 198 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 GUCY2CP25092 1073 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 CHMLP26374 656 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 HOXA7P31268 230 aaPredicted RBP5.37□□□□□ -1.55
VAV3-201ENST00000343258 TFAP4Q01664 338 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 PTH1RQ03431 593 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 LRRFIP1Q32MZ4 808 aaKnown RBP5.37□□□□□ -1.55
VAV3-201ENST00000343258 RRP12Q5JTH9 1297 aaKnown RBP5.37□□□□□ -1.55
VAV3-201ENST00000343258 FBXO46Q6PJ61 603 aaPredicted RBP5.37□□□□□ -1.55
VAV3-201ENST00000343258 CATSPERGQ6ZRH7 1159 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 AMOTL1Q8IY63 956 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 ANKRD7Q92527 254 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 C12orf42Q96LP6 360 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 TBC1D32Q96NH3 1257 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 NACAP1Q9BZK3 213 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 BTBD7Q9P203 1132 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 CLIP2Q9UDT6 1046 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 SLC45A1Q9Y2W3 748 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 TMX2Q9Y320 296 aa5.37□□□□□ -1.55
VAV3-201ENST00000343258 SZT2Q5T011 3432 aa5.36□□□□□ -1.55
VAV3-201ENST00000343258 LOC285556D6RIA3 1793 aa5.36□□□□□ -1.55
VAV3-201ENST00000343258 SPDYE16A6NNV3 312 aaPredicted RBP5.36□□□□□ -1.55
VAV3-201ENST00000343258 ELNP15502 786 aa5.36□□□□□ -1.55
VAV3-201ENST00000343258 ATN1P54259 1190 aaPredicted RBP5.36□□□□□ -1.55
VAV3-201ENST00000343258 NOLC1Q14978 699 aaKnown RBP eCLIP5.36□□□□□ -1.55
VAV3-201ENST00000343258 C10orf67Q8IYJ2 551 aa5.36□□□□□ -1.55
VAV3-201ENST00000343258 ATG4CQ96DT6 458 aa5.36□□□□□ -1.55
VAV3-201ENST00000343258 CCDC17Q96LX7 622 aa5.36□□□□□ -1.55
VAV3-201ENST00000343258 TANGO6Q9C0B7 1094 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms