RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 SLC15A5A6NIM6 579 aa15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 EIF5BO60841 1220 aaKnown RBP15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 HOXC6P09630 235 aa15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ZKSCAN1P17029 563 aaPredicted RBP15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 PTPREP23469 700 aa15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 STAT3P40763 770 aa15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ZNF543Q08ER8 600 aa15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 GRB14Q14449 540 aa15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 KRT32Q14532 448 aa15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 IFIT1BQ5T764 474 aaKnown RBP15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 TRMT44Q8IYL2 757 aaKnown RBP15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 KIFC2Q96AC6 838 aa15.33■□□□□ 0.05
HLA-DQA1-201ENST00000343139 ERCC3P19447 782 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 GRK4P32298 578 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 MCM5P33992 734 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 IFFO2Q5TF58 517 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 KCTD1Q719H9 257 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 TMTC2Q8N394 836 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 ZNF333Q96JL9 665 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 TMEM87BQ96K49 555 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 PNMA2Q9UL42 364 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 IVNS1ABPQ9Y6Y0 642 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 MYH4Q9Y623 1939 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 WDR19Q8NEZ3 1342 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 IFIT3O14879 490 aaKnown RBP15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 ADCY3O60266 1144 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 HSPA4P34932 840 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 RGS2P41220 211 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 ANTXR2P58335 489 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 CCDC96Q2M329 555 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 ASPRV1Q53RT3 343 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 IGDCC4Q8TDY8 1250 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 CWC22Q9HCG8 908 aaKnown RBP15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 PRR12Q9ULL5 1215 aa15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 CTDP1Q9Y5B0 961 aaPredicted RBP15.32■□□□□ 0.04
HLA-DQA1-201ENST00000343139 HMGB1P09429 215 aaKnown RBP15.31■□□□□ 0.04
HLA-DQA1-201ENST00000343139 IKQ13123 557 aaPredicted RBP15.31■□□□□ 0.04
HLA-DQA1-201ENST00000343139 MAP2K5Q13163 448 aa15.31■□□□□ 0.04
HLA-DQA1-201ENST00000343139 PLS1Q14651 629 aa15.31■□□□□ 0.04
HLA-DQA1-201ENST00000343139 MAP3K14Q99558 947 aa15.31■□□□□ 0.04
HLA-DQA1-201ENST00000343139 APBA2Q99767 749 aa15.31■□□□□ 0.04
HLA-DQA1-201ENST00000343139 FBXO40Q9UH90 709 aa15.31■□□□□ 0.04
HLA-DQA1-201ENST00000343139 PARP14Q460N5 1801 aa15.3■□□□□ 0.04
HLA-DQA1-201ENST00000343139 ECM2O94769 699 aaPredicted RBP15.3■□□□□ 0.04
HLA-DQA1-201ENST00000343139 LIFRP42702 1097 aa15.3■□□□□ 0.04
HLA-DQA1-201ENST00000343139 WTAPQ15007 396 aa15.3■□□□□ 0.04
HLA-DQA1-201ENST00000343139 TKFCQ3LXA3 575 aa15.3■□□□□ 0.04
HLA-DQA1-201ENST00000343139 SYDE2Q5VT97 1194 aa15.3■□□□□ 0.04
HLA-DQA1-201ENST00000343139 NCAPG2Q86XI2 1143 aa15.3■□□□□ 0.04
HLA-DQA1-201ENST00000343139 CHST13Q8NET6 341 aa15.3■□□□□ 0.04
HLA-DQA1-201ENST00000343139 RANBP17Q9H2T7 1088 aaKnown RBP15.3■□□□□ 0.04
HLA-DQA1-201ENST00000343139 ZSWIM8A7E2V4 1837 aa15.3■□□□□ 0.04
HLA-DQA1-201ENST00000343139 MGAMO43451 1857 aa15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 PRC1O43663 620 aa15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 FCER1AP12319 257 aa15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 CAPN2P17655 700 aa15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 UBXN2AP68543 259 aa15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 TMEM67Q5HYA8 995 aa15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 SNRNP48Q6IEG0 339 aaKnown RBP15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 RASGRP2Q7LDG7 609 aa15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 RASEFQ8IZ41 740 aa15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 NEK1Q96PY6 1258 aa15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 SLC5A4Q9NY91 659 aa15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 ISY1Q9ULR0 285 aaKnown RBP15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 ZNF536O15090 1300 aa15.29■□□□□ 0.04
HLA-DQA1-201ENST00000343139 CCDC85CA6NKD9 419 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 HMGCRP04035 888 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 ICAM1P05362 532 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 PARP1P09874 1014 aaKnown RBP15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 ADORA2AP29274 412 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 TROAPQ12815 778 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 WDR78Q5VTH9 848 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 TTBK2Q6IQ55 1244 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 USP26Q9BXU7 913 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 MAF1Q9H063 256 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 LY9Q9HBG7 655 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 MTMR7Q9Y216 660 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 DIS3Q9Y2L1 958 aaKnown RBP15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 SH2B2O14492 632 aaPredicted RBP15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 IGHA2P01877 340 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 EXOSC10Q01780 885 aaKnown RBP15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 KCTD2Q14681 263 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 FRMPD2Q68DX3 1309 aaPredicted RBP15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 DHX32Q7L7V1 743 aaKnown RBP15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 CATIPQ7Z7H3 387 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 SGMS1Q86VZ5 419 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 SH3TC2Q8TF17 1288 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 RAVER2Q9HCJ3 691 aaKnown RBP15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 GPCPD1Q9NPB8 672 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 ZNF236Q9UL36 1845 aa15.28■□□□□ 0.04
HLA-DQA1-201ENST00000343139 PALM3A6NDB9 673 aaPredicted RBP15.27■□□□□ 0.03
HLA-DQA1-201ENST00000343139 DDAH1O94760 285 aa15.27■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CYP2B6P20813 491 aa15.27■□□□□ 0.03
HLA-DQA1-201ENST00000343139 SLC16A2P36021 539 aa15.27■□□□□ 0.03
HLA-DQA1-201ENST00000343139 OLFML2BQ68BL8 750 aa15.27■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CHST3Q7LGC8 479 aa15.27■□□□□ 0.03
HLA-DQA1-201ENST00000343139 DPP9Q86TI2 863 aa15.27■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CPXCR1Q8N123 301 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms