RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 USP17L11C9JVI0 530 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 USP17L18D6R9N7 530 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 USP17L22D6RA61 530 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 USP17L17D6RBQ6 530 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 USP17L19D6RCP7 530 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 USP17L20D6RJB6 530 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 DEXIO95424 95 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 SLC10A3P09131 477 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 CETPP11597 493 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 GJB2P29033 226 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 USP17L24Q0WX57 530 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 SYDE2Q5VT97 1194 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 CATSPERGQ6ZRH7 1159 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 ADGRF4Q8IZF3 695 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 SLC26A6Q9BXS9 759 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 ORC3Q9UBD5 711 aaPredicted RBP23.94■■□□□ 1.42
SNX21-201ENST00000342644 KIF3AQ9Y496 699 aa23.94■■□□□ 1.42
SNX21-201ENST00000342644 SLC16A2P36021 539 aa23.93■■□□□ 1.42
SNX21-201ENST00000342644 AKAP17AQ02040 695 aaKnown RBP23.93■■□□□ 1.42
SNX21-201ENST00000342644 PRPF38AQ8NAV1 312 aaKnown RBP23.93■■□□□ 1.42
SNX21-201ENST00000342644 CPVLQ9H3G5 476 aa23.93■■□□□ 1.42
SNX21-201ENST00000342644 JMJD4Q9H9V9 463 aa23.93■■□□□ 1.42
SNX21-201ENST00000342644 FOXD4L1Q9NU39 408 aa23.93■■□□□ 1.42
SNX21-201ENST00000342644 ISY1Q9ULR0 285 aaKnown RBP23.93■■□□□ 1.42
SNX21-201ENST00000342644 AGTPBP1Q9UPW5 1226 aa23.93■■□□□ 1.42
SNX21-201ENST00000342644 V9GY48 417 aaPredicted RBP23.93■■□□□ 1.42
SNX21-201ENST00000342644 MYH6P13533 1939 aa23.93■■□□□ 1.42
SNX21-201ENST00000342644 MYPNQ86TC9 1320 aa23.93■■□□□ 1.42
SNX21-201ENST00000342644 PARP14Q460N5 1801 aa23.92■■□□□ 1.42
SNX21-201ENST00000342644 SLF1Q9BQI6 1058 aa23.92■■□□□ 1.42
SNX21-201ENST00000342644 TANGO6Q9C0B7 1094 aa23.92■■□□□ 1.42
SNX21-201ENST00000342644 PRR12Q9ULL5 1215 aa23.92■■□□□ 1.42
SNX21-201ENST00000342644 RLFQ13129 1914 aa23.92■■□□□ 1.42
SNX21-201ENST00000342644 TESPA1A2RU30 521 aaPredicted RBP23.91■■□□□ 1.42
SNX21-201ENST00000342644 FDX1P10109 184 aa23.91■■□□□ 1.42
SNX21-201ENST00000342644 IKQ13123 557 aaPredicted RBP23.91■■□□□ 1.42
SNX21-201ENST00000342644 GADL1Q6ZQY3 521 aa23.91■■□□□ 1.42
SNX21-201ENST00000342644 SPRYD3Q8NCJ5 442 aa23.91■■□□□ 1.42
SNX21-201ENST00000342644 RGS22Q8NE09 1264 aa23.91■■□□□ 1.42
SNX21-201ENST00000342644 WASF1Q92558 559 aa23.91■■□□□ 1.42
SNX21-201ENST00000342644 RRP36Q96EU6 259 aaKnown RBP23.91■■□□□ 1.42
SNX21-201ENST00000342644 DDX11Q96FC9 970 aa23.91■■□□□ 1.42
SNX21-201ENST00000342644 PPP1R9AQ9ULJ8 1098 aa23.91■■□□□ 1.42
SNX21-201ENST00000342644 RASSF10A6NK89 507 aa23.9■■□□□ 1.42
SNX21-201ENST00000342644 FAM155AB1AL88 458 aaPredicted RBP23.9■■□□□ 1.42
SNX21-201ENST00000342644 PABPC4Q13310 644 aaKnown RBP eCLIP23.9■■□□□ 1.42
SNX21-201ENST00000342644 COG2Q14746 738 aa23.9■■□□□ 1.42
SNX21-201ENST00000342644 PKN1Q16512 942 aa23.9■■□□□ 1.42
SNX21-201ENST00000342644 TREML2Q5T2D2 321 aa23.9■■□□□ 1.42
SNX21-201ENST00000342644 GPAT2Q6NUI2 795 aa23.9■■□□□ 1.42
SNX21-201ENST00000342644 FAM184AQ8NB25 1140 aa23.9■■□□□ 1.42
SNX21-201ENST00000342644 FBXO28Q9NVF7 368 aa23.9■■□□□ 1.42
SNX21-201ENST00000342644 SLC45A1Q9Y2W3 748 aa23.9■■□□□ 1.42
SNX21-201ENST00000342644 MANSC4A6NHS7 340 aaPredicted RBP23.89■■□□□ 1.42
SNX21-201ENST00000342644 FLOT1O75955 427 aa23.89■■□□□ 1.42
SNX21-201ENST00000342644 PDIA4P13667 645 aaKnown RBP23.89■■□□□ 1.42
SNX21-201ENST00000342644 PFKFB3Q16875 520 aaPredicted RBP23.89■■□□□ 1.42
SNX21-201ENST00000342644 VAT1LQ9HCJ6 419 aa23.89■■□□□ 1.42
SNX21-201ENST00000342644 ADAMTS5Q9UNA0 930 aa23.89■■□□□ 1.42
SNX21-201ENST00000342644 CCL15-CCL14A0A0B4J2E2 113 aa23.89■■□□□ 1.41
SNX21-201ENST00000342644 PNMA6FA0A0J9YX94 578 aa23.89■■□□□ 1.41
SNX21-201ENST00000342644 ZBTB5O15062 677 aa23.89■■□□□ 1.41
SNX21-201ENST00000342644 PPFIA3O75145 1194 aa23.89■■□□□ 1.41
SNX21-201ENST00000342644 PDCP20941 246 aa23.89■■□□□ 1.41
SNX21-201ENST00000342644 DSG3P32926 999 aa23.89■■□□□ 1.41
SNX21-201ENST00000342644 CCL15Q16663 113 aa23.89■■□□□ 1.41
SNX21-201ENST00000342644 BRI3BPQ8WY22 251 aa23.89■■□□□ 1.41
SNX21-201ENST00000342644 PIGSQ96S52 555 aa23.89■■□□□ 1.41
SNX21-201ENST00000342644 RANBP17Q9H2T7 1088 aaKnown RBP23.89■■□□□ 1.41
SNX21-201ENST00000342644 HOXC10Q9NYD6 342 aa23.89■■□□□ 1.41
SNX21-201ENST00000342644 SEC63Q9UGP8 760 aaKnown RBP23.89■■□□□ 1.41
SNX21-201ENST00000342644 DTNBO60941 627 aa23.88■■□□□ 1.41
SNX21-201ENST00000342644 SCG2P13521 617 aa23.88■■□□□ 1.41
SNX21-201ENST00000342644 DDIT3P35638 169 aa23.88■■□□□ 1.41
SNX21-201ENST00000342644 INHBEP58166 350 aa23.88■■□□□ 1.41
SNX21-201ENST00000342644 ANKRD23Q86SG2 305 aa23.88■■□□□ 1.41
SNX21-201ENST00000342644 FAM177A1Q8N128 213 aaPredicted RBP23.88■■□□□ 1.41
SNX21-201ENST00000342644 KIFC2Q96AC6 838 aa23.88■■□□□ 1.41
SNX21-201ENST00000342644 hCG_1984214I3L0E3 225 aa23.87■■□□□ 1.41
SNX21-201ENST00000342644 MKRN3Q13064 507 aaKnown RBP23.87■■□□□ 1.41
SNX21-201ENST00000342644 ZNF713Q8N859 430 aaPredicted RBP23.87■■□□□ 1.41
SNX21-201ENST00000342644 CDC37Q16543 378 aaPredicted RBP23.86■■□□□ 1.41
SNX21-201ENST00000342644 DEFB115Q30KQ5 88 aa23.86■■□□□ 1.41
SNX21-201ENST00000342644 LBX2Q6XYB7 198 aa23.86■■□□□ 1.41
SNX21-201ENST00000342644 HOMER1Q86YM7 354 aa23.86■■□□□ 1.41
SNX21-201ENST00000342644 ALG1Q9BT22 464 aa23.86■■□□□ 1.41
SNX21-201ENST00000342644 SLC38A10Q9HBR0 1119 aa23.86■■□□□ 1.41
SNX21-201ENST00000342644 ZCCHC17Q9NP64 241 aaKnown RBP23.86■■□□□ 1.41
SNX21-201ENST00000342644 hCG_1642624A0A1W2PR95 340 aa23.85■■□□□ 1.41
SNX21-201ENST00000342644 QRICH1Q2TAL8 776 aa23.85■■□□□ 1.41
SNX21-201ENST00000342644 LARP1BQ659C4 914 aaKnown RBP23.85■■□□□ 1.41
SNX21-201ENST00000342644 ASCC2Q9H1I8 757 aaPredicted RBP23.85■■□□□ 1.41
SNX21-201ENST00000342644 SH3GLB2Q9NR46 395 aa23.85■■□□□ 1.41
SNX21-201ENST00000342644 PNMA2Q9UL42 364 aa23.85■■□□□ 1.41
SNX21-201ENST00000342644 SPDYE16A6NNV3 312 aaPredicted RBP23.84■■□□□ 1.41
SNX21-201ENST00000342644 BTBD19C9JJ37 291 aa23.84■■□□□ 1.41
SNX21-201ENST00000342644 VWA5AO00534 786 aa23.84■■□□□ 1.41
SNX21-201ENST00000342644 OSBPP22059 807 aa23.84■■□□□ 1.41
SNX21-201ENST00000342644 TRAF1Q13077 416 aa23.84■■□□□ 1.41
SNX21-201ENST00000342644 BARHL2Q9NY43 387 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms