RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 IRX6P78412 446 aaPredicted RBP23.86■■□□□ 1.41
SYNE2-201ENST00000341472 SNRNP48Q6IEG0 339 aaKnown RBP23.86■■□□□ 1.41
SYNE2-201ENST00000341472 CPXCR1Q8N123 301 aa23.86■■□□□ 1.41
SYNE2-201ENST00000341472 CHURC1Q8WUH1 139 aa23.86■■□□□ 1.41
SYNE2-201ENST00000341472 PLXNB2O15031 1838 aa23.86■■□□□ 1.41
SYNE2-201ENST00000341472 TMEM232C9JQI7 657 aa23.85■■□□□ 1.41
SYNE2-201ENST00000341472 HIP1O00291 1037 aa23.85■■□□□ 1.41
SYNE2-201ENST00000341472 ATP2A1O14983 1001 aa23.85■■□□□ 1.41
SYNE2-201ENST00000341472 NMT2O60551 498 aa23.85■■□□□ 1.41
SYNE2-201ENST00000341472 PGK2P07205 417 aa23.85■■□□□ 1.41
SYNE2-201ENST00000341472 MCCP23508 829 aa23.85■■□□□ 1.41
SYNE2-201ENST00000341472 SLC1A4P43007 532 aa23.85■■□□□ 1.41
SYNE2-201ENST00000341472 RRP12Q5JTH9 1297 aaKnown RBP23.85■■□□□ 1.41
SYNE2-201ENST00000341472 GMCL1Q96IK5 515 aa23.85■■□□□ 1.41
SYNE2-201ENST00000341472 MAML3Q96JK9 1138 aa23.85■■□□□ 1.41
SYNE2-201ENST00000341472 SLC38A10Q9HBR0 1119 aa23.85■■□□□ 1.41
SYNE2-201ENST00000341472 DIAPH3Q9NSV4 1193 aa23.85■■□□□ 1.41
SYNE2-201ENST00000341472 DIS3Q9Y2L1 958 aaKnown RBP23.85■■□□□ 1.41
SYNE2-201ENST00000341472 FDX1P10109 184 aa23.84■■□□□ 1.41
SYNE2-201ENST00000341472 CYBAP13498 195 aa23.84■■□□□ 1.41
SYNE2-201ENST00000341472 PRAMEF19Q5SWL8 479 aa23.84■■□□□ 1.41
SYNE2-201ENST00000341472 CWC27Q6UX04 472 aaKnown RBP23.84■■□□□ 1.41
SYNE2-201ENST00000341472 STAG1Q8WVM7 1258 aa23.84■■□□□ 1.41
SYNE2-201ENST00000341472 CHMP4CQ96CF2 233 aa23.84■■□□□ 1.41
SYNE2-201ENST00000341472 RAVER2Q9HCJ3 691 aaKnown RBP23.84■■□□□ 1.41
SYNE2-201ENST00000341472 RIPK3Q9Y572 518 aa23.84■■□□□ 1.41
SYNE2-201ENST00000341472 HAND2P61296 217 aa23.83■■□□□ 1.41
SYNE2-201ENST00000341472 ZNF792Q3KQV3 632 aa23.83■■□□□ 1.41
SYNE2-201ENST00000341472 RCSD1Q6JBY9 416 aa23.83■■□□□ 1.41
SYNE2-201ENST00000341472 FAM160B2Q86V87 743 aa23.83■■□□□ 1.41
SYNE2-201ENST00000341472 DDX11Q96FC9 970 aa23.83■■□□□ 1.41
SYNE2-201ENST00000341472 NOVP48745 357 aa23.82■■□□□ 1.4
SYNE2-201ENST00000341472 OAZ1P54368 228 aa23.82■■□□□ 1.4
SYNE2-201ENST00000341472 IKQ13123 557 aaPredicted RBP23.82■■□□□ 1.4
SYNE2-201ENST00000341472 CHRDL2Q6WN34 429 aa23.82■■□□□ 1.4
SYNE2-201ENST00000341472 MFSD6Q6ZSS7 791 aa23.82■■□□□ 1.4
SYNE2-201ENST00000341472 ZMYM6O95789 1325 aa23.82■■□□□ 1.4
SYNE2-201ENST00000341472 SEPT4O43236 478 aa23.81■■□□□ 1.4
SYNE2-201ENST00000341472 PCP11498 1178 aaKnown RBP23.81■■□□□ 1.4
SYNE2-201ENST00000341472 COL6A1P12109 1028 aa23.81■■□□□ 1.4
SYNE2-201ENST00000341472 STAT2P52630 851 aa23.81■■□□□ 1.4
SYNE2-201ENST00000341472 AKNAD1Q5T1N1 836 aa23.81■■□□□ 1.4
SYNE2-201ENST00000341472 ARRDC4Q8NCT1 418 aa23.81■■□□□ 1.4
SYNE2-201ENST00000341472 TINF2Q9BSI4 451 aa23.81■■□□□ 1.4
SYNE2-201ENST00000341472 TCP11L1Q9NUJ3 509 aa23.81■■□□□ 1.4
SYNE2-201ENST00000341472 ZNF213O14771 459 aa23.8■■□□□ 1.4
SYNE2-201ENST00000341472 PLA2G6O60733 806 aa23.8■■□□□ 1.4
SYNE2-201ENST00000341472 RNF41Q9H4P4 317 aaPredicted RBP23.8■■□□□ 1.4
SYNE2-201ENST00000341472 FBXO40Q9UH90 709 aa23.8■■□□□ 1.4
SYNE2-201ENST00000341472 NRBP1Q9UHY1 535 aa23.8■■□□□ 1.4
SYNE2-201ENST00000341472 MTMR7Q9Y216 660 aa23.8■■□□□ 1.4
SYNE2-201ENST00000341472 RLFQ13129 1914 aa23.8■■□□□ 1.4
SYNE2-201ENST00000341472 CENPBP07199 599 aaPredicted RBP23.79■■□□□ 1.4
SYNE2-201ENST00000341472 TOP1P11387 765 aaKnown RBP23.79■■□□□ 1.4
SYNE2-201ENST00000341472 PDE4AP27815 886 aa23.79■■□□□ 1.4
SYNE2-201ENST00000341472 KCTD1Q719H9 257 aa23.79■■□□□ 1.4
SYNE2-201ENST00000341472 C7orf61Q8IZ16 206 aa23.79■■□□□ 1.4
SYNE2-201ENST00000341472 CHST13Q8NET6 341 aa23.79■■□□□ 1.4
SYNE2-201ENST00000341472 PFASO15067 1338 aa23.79■■□□□ 1.4
SYNE2-201ENST00000341472 MYH8P13535 1937 aa23.78■■□□□ 1.4
SYNE2-201ENST00000341472 ANO1Q5XXA6 986 aa23.78■■□□□ 1.4
SYNE2-201ENST00000341472 ANKRD35Q8N283 1001 aa23.78■■□□□ 1.4
SYNE2-201ENST00000341472 TTC14Q96N46 770 aa23.78■■□□□ 1.4
SYNE2-201ENST00000341472 TMEM47Q9BQJ4 181 aa23.78■■□□□ 1.4
SYNE2-201ENST00000341472 SENP6Q9GZR1 1112 aaPredicted RBP23.78■■□□□ 1.4
SYNE2-201ENST00000341472 DNM1LO00429 736 aa23.77■■□□□ 1.4
SYNE2-201ENST00000341472 MSL3Q8N5Y2 521 aaKnown RBP23.77■■□□□ 1.4
SYNE2-201ENST00000341472 DCAF4Q8WV16 495 aa23.77■■□□□ 1.4
SYNE2-201ENST00000341472 GREB1LQ9C091 1923 aaPredicted RBP23.76■■□□□ 1.39
SYNE2-201ENST00000341472 DNAJC25-GNG10A0A024R161 153 aa23.76■■□□□ 1.39
SYNE2-201ENST00000341472 CCDC96Q2M329 555 aa23.76■■□□□ 1.39
SYNE2-201ENST00000341472 TBC1D10CQ8IV04 446 aa23.76■■□□□ 1.39
SYNE2-201ENST00000341472 ESR2Q92731 530 aa23.76■■□□□ 1.39
SYNE2-201ENST00000341472 RBM27Q9P2N5 1060 aaKnown RBP23.76■■□□□ 1.39
SYNE2-201ENST00000341472 CTNNA3Q9UI47 895 aa23.76■■□□□ 1.39
SYNE2-201ENST00000341472 PRR12Q9ULL5 1215 aa23.76■■□□□ 1.39
SYNE2-201ENST00000341472 CNPY2Q9Y2B0 182 aa23.76■■□□□ 1.39
SYNE2-201ENST00000341472 MYCNP04198 464 aaPredicted RBP23.75■■□□□ 1.39
SYNE2-201ENST00000341472 TKFCQ3LXA3 575 aa23.75■■□□□ 1.39
SYNE2-201ENST00000341472 GJC2Q5T442 439 aaPredicted RBP23.75■■□□□ 1.39
SYNE2-201ENST00000341472 TTC22Q5TAA0 569 aa23.75■■□□□ 1.39
SYNE2-201ENST00000341472 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.75■■□□□ 1.39
SYNE2-201ENST00000341472 AGBL1Q96MI9 1066 aa23.75■■□□□ 1.39
SYNE2-201ENST00000341472 DSCC1Q9BVC3 393 aa23.75■■□□□ 1.39
SYNE2-201ENST00000341472 HOMER2Q9NSB8 354 aa23.75■■□□□ 1.39
SYNE2-201ENST00000341472 ZMYND8Q9ULU4 1186 aaPredicted RBP23.75■■□□□ 1.39
SYNE2-201ENST00000341472 A0A0G2JMZ2 1700 aa23.74■■□□□ 1.39
SYNE2-201ENST00000341472 TAL1P17542 331 aaPredicted RBP23.74■■□□□ 1.39
SYNE2-201ENST00000341472 NT5C2P49902 561 aa23.74■■□□□ 1.39
SYNE2-201ENST00000341472 SNAP25P60880 206 aa23.74■■□□□ 1.39
SYNE2-201ENST00000341472 LRRC26Q2I0M4 334 aa23.74■■□□□ 1.39
SYNE2-201ENST00000341472 CCDC174Q6PII3 467 aa23.74■■□□□ 1.39
SYNE2-201ENST00000341472 ZNF467Q7Z7K2 595 aaPredicted RBP23.74■■□□□ 1.39
SYNE2-201ENST00000341472 ZNF865P0CJ78 1059 aaPredicted RBP23.73■■□□□ 1.39
SYNE2-201ENST00000341472 RARBP10826 455 aa23.73■■□□□ 1.39
SYNE2-201ENST00000341472 IMMTQ16891 758 aaKnown RBP23.73■■□□□ 1.39
SYNE2-201ENST00000341472 TTBK2Q6IQ55 1244 aa23.73■■□□□ 1.39
SYNE2-201ENST00000341472 MAMDC4Q6UXC1 1216 aa23.73■■□□□ 1.39
SYNE2-201ENST00000341472 PRO3102Q9H379 93 aa23.73■■□□□ 1.39
SYNE2-201ENST00000341472 ACAD9Q9H845 621 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms