RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 CATIPQ7Z7H3 387 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 CMTR1Q8N1G2 835 aaKnown RBP15.44■□□□□ 0.06
TUBD1-202ENST00000340993 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
TUBD1-202ENST00000340993 GPRC5AQ8NFJ5 357 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 CFHR5Q9BXR6 569 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 RAVER2Q9HCJ3 691 aaKnown RBP15.44■□□□□ 0.06
TUBD1-202ENST00000340993 HOXC10Q9NYD6 342 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 FEM1BQ9UK73 627 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 A0A0G2JMZ2 1700 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 VWA5AO00534 786 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 PARP1P09874 1014 aaKnown RBP15.44■□□□□ 0.06
TUBD1-202ENST00000340993 RPS6KB1P23443 525 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 GCLCP48506 637 aaPredicted RBP15.44■□□□□ 0.06
TUBD1-202ENST00000340993 ZNF543Q08ER8 600 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 KIF22Q14807 665 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 TMEM132BQ14DG7 1078 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 FAM110CQ1W6H9 321 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 NCAPG2Q86XI2 1143 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 ZNF654Q8IZM8 581 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 BRF1Q92994 677 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 TRIM47Q96LD4 638 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 PRR12Q9ULL5 1215 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 PPFIA3O75145 1194 aa15.43■□□□□ 0.06
TUBD1-202ENST00000340993 PSMA5P28066 241 aa15.43■□□□□ 0.06
TUBD1-202ENST00000340993 EXOSC10Q01780 885 aaKnown RBP15.43■□□□□ 0.06
TUBD1-202ENST00000340993 CCDC82Q8N4S0 544 aa15.43■□□□□ 0.06
TUBD1-202ENST00000340993 ERO1AQ96HE7 468 aa15.43■□□□□ 0.06
TUBD1-202ENST00000340993 TMEM87BQ96K49 555 aa15.43■□□□□ 0.06
TUBD1-202ENST00000340993 BRPF3Q9ULD4 1205 aa15.43■□□□□ 0.06
TUBD1-202ENST00000340993 PLXNB2O15031 1838 aa15.43■□□□□ 0.06
TUBD1-202ENST00000340993 KLF18A0A0U1RQI7 1052 aa15.42■□□□□ 0.06
TUBD1-202ENST00000340993 TNPO2O14787 897 aaKnown RBP15.42■□□□□ 0.06
TUBD1-202ENST00000340993 DTNBO60941 627 aa15.42■□□□□ 0.06
TUBD1-202ENST00000340993 MYCP01106 439 aaPredicted RBP15.42■□□□□ 0.06
TUBD1-202ENST00000340993 SYDE2Q5VT97 1194 aa15.42■□□□□ 0.06
TUBD1-202ENST00000340993 SNRNP48Q6IEG0 339 aaKnown RBP15.42■□□□□ 0.06
TUBD1-202ENST00000340993 LBX2Q6XYB7 198 aa15.42■□□□□ 0.06
TUBD1-202ENST00000340993 PRPF38AQ8NAV1 312 aaKnown RBP15.42■□□□□ 0.06
TUBD1-202ENST00000340993 ANKS1AQ92625 1134 aa15.42■□□□□ 0.06
TUBD1-202ENST00000340993 SPATC1LQ9H0A9 340 aa15.42■□□□□ 0.06
TUBD1-202ENST00000340993 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
TUBD1-202ENST00000340993 CYP46A1Q9Y6A2 500 aa15.42■□□□□ 0.06
TUBD1-202ENST00000340993 ZBED4O75132 1171 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 RUFY3Q7L099 469 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 OTOP1Q7RTM1 612 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 HOMER1Q86YM7 354 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 CHURC1Q8WUH1 139 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 AGBL1Q96MI9 1066 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 MOV10L1Q9BXT6 1211 aaKnown RBP15.41■□□□□ 0.06
TUBD1-202ENST00000340993 C22orf23Q9BZE7 217 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 MAD2L2Q9UI95 211 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 SYNPO2Q9UMS6 1093 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 GABRQQ9UN88 632 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 RABGAP1Q9Y3P9 1069 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 ZNFX1Q9P2E3 1918 aaKnown RBP15.41■□□□□ 0.06
TUBD1-202ENST00000340993 hCG_1642624A0A1W2PR95 340 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 HMGB1P09429 215 aaKnown RBP15.41■□□□□ 0.06
TUBD1-202ENST00000340993 ERCC3P19447 782 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 FCGRTP55899 365 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 USH1GQ495M9 461 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 NBPF11Q86T75 865 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 PDRG1Q9NUG6 133 aa15.41■□□□□ 0.06
TUBD1-202ENST00000340993 GOLGA8BA8MQT2 603 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 KLRF2D3W0D1 207 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 PLEKHA8P1O95397 391 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 SNHG28P0DPA3 235 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 NT5C2P49902 561 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 PRKCZQ05513 592 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 TROAPQ12815 778 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 STK3Q13188 491 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 GRM4Q14833 912 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 FAM160B2Q86V87 743 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 ADGRF4Q8IZF3 695 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 PRDM10Q9NQV6 1147 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 MORF4L1Q9UBU8 362 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 RIPK3Q9Y572 518 aa15.4■□□□□ 0.06
TUBD1-202ENST00000340993 ALAS1P13196 640 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 STAT3P40763 770 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 ASPRV1Q53RT3 343 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 SYNE3Q6ZMZ3 975 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 REPS2Q8NFH8 660 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 CTCFLQ8NI51 663 aaPredicted RBP15.39■□□□□ 0.05
TUBD1-202ENST00000340993 GTF3C2Q8WUA4 911 aaPredicted RBP15.39■□□□□ 0.05
TUBD1-202ENST00000340993 UPF2Q9HAU5 1272 aaKnown RBP15.39■□□□□ 0.05
TUBD1-202ENST00000340993 SLC38A10Q9HBR0 1119 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 ZSWIM6Q9HCJ5 1215 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 ZNF214Q9UL59 606 aaPredicted RBP15.39■□□□□ 0.05
TUBD1-202ENST00000340993 GOLGA8AA7E2F4 631 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 CCT2P78371 535 aaKnown RBP15.39■□□□□ 0.05
TUBD1-202ENST00000340993 TOB2Q14106 344 aaPredicted RBP15.39■□□□□ 0.05
TUBD1-202ENST00000340993 SLC35G1Q2M3R5 365 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 GPATCH4Q5T3I0 446 aaKnown RBP15.39■□□□□ 0.05
TUBD1-202ENST00000340993 APOA5Q6Q788 366 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 GPR142Q7Z601 462 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 CTU1Q7Z7A3 348 aaKnown RBP15.39■□□□□ 0.05
TUBD1-202ENST00000340993 MYPNQ86TC9 1320 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 CCPG1Q9ULG6 757 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 PTCH2Q9Y6C5 1203 aa15.39■□□□□ 0.05
TUBD1-202ENST00000340993 ZBTB43O43298 467 aa15.38■□□□□ 0.05
TUBD1-202ENST00000340993 EPB41L2O43491 1005 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms