RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SRLQ86TD4 932 aa17.18■□□□□ 0.34
BRAT1-201ENST00000340611 STAG2Q8N3U4 1231 aa17.18■□□□□ 0.34
BRAT1-201ENST00000340611 CRACR2BQ8N4Y2 399 aaPredicted RBP17.18■□□□□ 0.34
BRAT1-201ENST00000340611 ERO1AQ96HE7 468 aa17.18■□□□□ 0.34
BRAT1-201ENST00000340611 TMEM39BQ9GZU3 492 aa17.18■□□□□ 0.34
BRAT1-201ENST00000340611 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.18■□□□□ 0.34
BRAT1-201ENST00000340611 GDF11O95390 407 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 VEGFAP15692 232 aaPredicted RBP17.17■□□□□ 0.34
BRAT1-201ENST00000340611 RBM43Q6ZSC3 357 aaKnown RBP17.17■□□□□ 0.34
BRAT1-201ENST00000340611 CATIPQ7Z7H3 387 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 CREBRFQ8IUR6 639 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 ZNF70Q9UC06 446 aaPredicted RBP17.17■□□□□ 0.34
BRAT1-201ENST00000340611 WNT10BO00744 389 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 SEC31AO94979 1220 aaKnown RBP17.17■□□□□ 0.34
BRAT1-201ENST00000340611 SKILP12757 684 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 LMAN1P49257 510 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 HDLBPQ00341 1268 aaKnown RBP17.17■□□□□ 0.34
BRAT1-201ENST00000340611 LRRC47Q8N1G4 583 aaKnown RBP17.17■□□□□ 0.34
BRAT1-201ENST00000340611 DEF6Q9H4E7 631 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 SIPA1L1O43166 1804 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 SLU7O95391 586 aaKnown RBP17.17■□□□□ 0.34
BRAT1-201ENST00000340611 MUM1L1Q5H9M0 696 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 MIGA2Q7L4E1 593 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 PNMA1Q8ND90 353 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 CCDC34Q96HJ3 373 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 TMEM47Q9BQJ4 181 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 HDAC9Q9UKV0 1011 aa17.17■□□□□ 0.34
BRAT1-201ENST00000340611 RAD21O60216 631 aa17.16■□□□□ 0.34
BRAT1-201ENST00000340611 JAG1P78504 1218 aa17.16■□□□□ 0.34
BRAT1-201ENST00000340611 MICALL2Q8IY33 904 aa17.16■□□□□ 0.34
BRAT1-201ENST00000340611 ERCC4Q92889 916 aaPredicted RBP17.16■□□□□ 0.34
BRAT1-201ENST00000340611 KAT14Q9H8E8 782 aa17.16■□□□□ 0.34
BRAT1-201ENST00000340611 MYOZ2Q9NPC6 264 aa17.16■□□□□ 0.34
BRAT1-201ENST00000340611 PCP11498 1178 aaKnown RBP17.16■□□□□ 0.34
BRAT1-201ENST00000340611 RRP1BQ14684 758 aaKnown RBP17.16■□□□□ 0.34
BRAT1-201ENST00000340611 CSRNP1Q96S65 589 aa17.16■□□□□ 0.34
BRAT1-201ENST00000340611 ALG1Q9BT22 464 aa17.16■□□□□ 0.34
BRAT1-201ENST00000340611 MRIQ9BWK5 157 aa17.16■□□□□ 0.34
BRAT1-201ENST00000340611 IDI2Q9BXS1 227 aa17.16■□□□□ 0.34
BRAT1-201ENST00000340611 CWC15Q9P013 229 aaKnown RBP17.16■□□□□ 0.34
BRAT1-201ENST00000340611 ARFGEF1Q9Y6D6 1849 aa17.15■□□□□ 0.34
BRAT1-201ENST00000340611 HLA-DOAP06340 250 aa17.15■□□□□ 0.34
BRAT1-201ENST00000340611 TPM4P67936 248 aa17.15■□□□□ 0.34
BRAT1-201ENST00000340611 IQCB1Q15051 598 aa17.15■□□□□ 0.34
BRAT1-201ENST00000340611 C8orf76Q96K31 380 aa17.15■□□□□ 0.34
BRAT1-201ENST00000340611 KCNJ14Q9UNX9 436 aa17.15■□□□□ 0.34
BRAT1-201ENST00000340611 ARHGAP29Q52LW3 1261 aa17.15■□□□□ 0.34
BRAT1-201ENST00000340611 PRAMEF18Q5VWM3 479 aa17.15■□□□□ 0.34
BRAT1-201ENST00000340611 TMTC2Q8N394 836 aa17.15■□□□□ 0.34
BRAT1-201ENST00000340611 MYO3BQ8WXR4 1341 aa17.15■□□□□ 0.34
BRAT1-201ENST00000340611 GPS2Q13227 327 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 SRBD1Q8N5C6 995 aaKnown RBP17.14■□□□□ 0.33
BRAT1-201ENST00000340611 BRMS1Q9HCU9 246 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 CNOT7Q9UIV1 285 aaKnown RBP17.14■□□□□ 0.33
BRAT1-201ENST00000340611 AGBL3Q8NEM8 1001 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 CXorf56Q9H5V9 222 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 FZD1Q9UP38 647 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 V9GY48 417 aaPredicted RBP17.14■□□□□ 0.33
BRAT1-201ENST00000340611 MYH6P13533 1939 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 BECN2A8MW95 431 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 KIF28PB7ZC32 967 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 FZD9O00144 591 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 OAS2P29728 719 aaKnown RBP17.14■□□□□ 0.33
BRAT1-201ENST00000340611 SSRP1Q08945 709 aaKnown RBP17.14■□□□□ 0.33
BRAT1-201ENST00000340611 USP17L2Q6R6M4 530 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 DLK2Q6UY11 383 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 NEDD1Q8NHV4 660 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 SHISA4Q96DD7 197 aa17.14■□□□□ 0.33
BRAT1-201ENST00000340611 RESTQ13127 1097 aa17.13■□□□□ 0.33
BRAT1-201ENST00000340611 TNIP1Q15025 636 aa17.13■□□□□ 0.33
BRAT1-201ENST00000340611 VPS33BQ9H267 617 aa17.13■□□□□ 0.33
BRAT1-201ENST00000340611 CNTNAP1P78357 1384 aa17.13■□□□□ 0.33
BRAT1-201ENST00000340611 CCDC84Q86UT8 332 aaPredicted RBP17.13■□□□□ 0.33
BRAT1-201ENST00000340611 TMOD2Q9NZR1 351 aa17.13■□□□□ 0.33
BRAT1-201ENST00000340611 PI4KBQ9UBF8 816 aa17.13■□□□□ 0.33
BRAT1-201ENST00000340611 SUFUQ9UMX1 484 aa17.13■□□□□ 0.33
BRAT1-201ENST00000340611 IFNAR1P17181 557 aa17.12■□□□□ 0.33
BRAT1-201ENST00000340611 ATP2B1P20020 1258 aa17.12■□□□□ 0.33
BRAT1-201ENST00000340611 SKIDA1Q1XH10 827 aa17.12■□□□□ 0.33
BRAT1-201ENST00000340611 SLC35G1Q2M3R5 365 aa17.12■□□□□ 0.33
BRAT1-201ENST00000340611 SPDYE2Q495Y8 402 aa17.12■□□□□ 0.33
BRAT1-201ENST00000340611 FRMPD2Q68DX3 1309 aaPredicted RBP17.12■□□□□ 0.33
BRAT1-201ENST00000340611 DDNO94850 711 aaPredicted RBP17.12■□□□□ 0.33
BRAT1-201ENST00000340611 CPLX2Q6PUV4 134 aaKnown RBP17.12■□□□□ 0.33
BRAT1-201ENST00000340611 TMCO3Q6UWJ1 677 aa17.12■□□□□ 0.33
BRAT1-201ENST00000340611 NYAP1Q6ZVC0 841 aa17.12■□□□□ 0.33
BRAT1-201ENST00000340611 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
BRAT1-201ENST00000340611 ZNF287Q9HBT7 754 aa17.12■□□□□ 0.33
BRAT1-201ENST00000340611 CDC25BP30305 580 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 CCZ1BP86790 482 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 CCZ1P86791 482 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-201ENST00000340611 KRT40Q6A162 431 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 FBXO18Q8NFZ0 1043 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 RNF181Q9P0P0 153 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 VPS54Q9P1Q0 977 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 USP17L5A8MUK1 530 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 FMNL1O95466 1100 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-201ENST00000340611 H2AFXP16104 143 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-201ENST00000340611 FUT2Q10981 343 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 SEPT2Q15019 361 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms