RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 ERICH2A1L162 156 aa17.88■□□□□ 0.45
UBE3B-201ENST00000340074 PLEKHH3Q7Z736 793 aa17.88■□□□□ 0.45
UBE3B-201ENST00000340074 SLC38A10Q9HBR0 1119 aa17.88■□□□□ 0.45
UBE3B-201ENST00000340074 GPCPD1Q9NPB8 672 aa17.88■□□□□ 0.45
UBE3B-201ENST00000340074 ZNF236Q9UL36 1845 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 ZBED4O75132 1171 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 ERCC3P19447 782 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 MCM5P33992 734 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 HSPA4P34932 840 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 SLC16A2P36021 539 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 STAT3P40763 770 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 ZNF543Q08ER8 600 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 WTAPQ15007 396 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 SART3Q15020 963 aaKnown RBP17.87■□□□□ 0.45
UBE3B-201ENST00000340074 TSGA10IPQ3SY00 556 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 SLC9C1Q4G0N8 1177 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 NCAPG2Q86XI2 1143 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 CPXCR1Q8N123 301 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 SHCBP1Q8NEM2 672 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 IGDCC4Q8TDY8 1250 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 SENP2Q9HC62 589 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 PRR12Q9ULL5 1215 aa17.87■□□□□ 0.45
UBE3B-201ENST00000340074 CTDP1Q9Y5B0 961 aaPredicted RBP17.87■□□□□ 0.45
UBE3B-201ENST00000340074 PRC1O43663 620 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 GOLGA8HP0CJ92 632 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 ZKSCAN1P17029 563 aaPredicted RBP17.86■□□□□ 0.45
UBE3B-201ENST00000340074 IRF5Q13568 498 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 ADCK5Q3MIX3 580 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 TMEM67Q5HYA8 995 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 MORN1Q5T089 497 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 BTNL9Q6UXG8 535 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 RIOX2Q8IUF8 465 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 SH3TC2Q8TF17 1288 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 SOCS4Q8WXH5 440 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 NEK1Q96PY6 1258 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 NUDT12Q9BQG2 462 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 MROH8Q9H579 483 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 RAVER2Q9HCJ3 691 aaKnown RBP17.86■□□□□ 0.45
UBE3B-201ENST00000340074 IVNS1ABPQ9Y6Y0 642 aa17.86■□□□□ 0.45
UBE3B-201ENST00000340074 CCDC85CA6NKD9 419 aa17.85■□□□□ 0.45
UBE3B-201ENST00000340074 ATP2A1O14983 1001 aa17.85■□□□□ 0.45
UBE3B-201ENST00000340074 SLC25A27O95847 323 aa17.85■□□□□ 0.45
UBE3B-201ENST00000340074 FDX1P10109 184 aa17.85■□□□□ 0.45
UBE3B-201ENST00000340074 PTPREP23469 700 aa17.85■□□□□ 0.45
UBE3B-201ENST00000340074 SNAP25P60880 206 aa17.85■□□□□ 0.45
UBE3B-201ENST00000340074 SYDE2Q5VT97 1194 aa17.85■□□□□ 0.45
UBE3B-201ENST00000340074 SNRNP48Q6IEG0 339 aaKnown RBP17.85■□□□□ 0.45
UBE3B-201ENST00000340074 KCNB2Q92953 911 aa17.85■□□□□ 0.45
UBE3B-201ENST00000340074 TEX13BQ9BXU2 312 aa17.85■□□□□ 0.45
UBE3B-201ENST00000340074 GPHNQ9NQX3 736 aaPredicted RBP17.85■□□□□ 0.45
UBE3B-201ENST00000340074 RIPK3Q9Y572 518 aa17.85■□□□□ 0.45
UBE3B-201ENST00000340074 BAZ2BQ9UIF8 2168 aaKnown RBP17.85■□□□□ 0.45
UBE3B-201ENST00000340074 ADCY3O60266 1144 aa17.84■□□□□ 0.45
UBE3B-201ENST00000340074 ELNP15502 786 aa17.84■□□□□ 0.45
UBE3B-201ENST00000340074 CYP2B6P20813 491 aa17.84■□□□□ 0.45
UBE3B-201ENST00000340074 GRK4P32298 578 aa17.84■□□□□ 0.45
UBE3B-201ENST00000340074 SLC4A3P48751 1232 aa17.84■□□□□ 0.45
UBE3B-201ENST00000340074 KRT32Q14532 448 aa17.84■□□□□ 0.45
UBE3B-201ENST00000340074 GPATCH4Q5T3I0 446 aaKnown RBP17.84■□□□□ 0.45
UBE3B-201ENST00000340074 NBPF11Q86T75 865 aa17.84■□□□□ 0.45
UBE3B-201ENST00000340074 USP6NLQ92738 828 aa17.84■□□□□ 0.45
UBE3B-201ENST00000340074 ARMC5Q96C12 935 aa17.84■□□□□ 0.45
UBE3B-201ENST00000340074 USP26Q9BXU7 913 aa17.84■□□□□ 0.45
UBE3B-201ENST00000340074 LY9Q9HBG7 655 aa17.84■□□□□ 0.45
UBE3B-201ENST00000340074 SNX14Q9Y5W7 946 aa17.84■□□□□ 0.45
UBE3B-201ENST00000340074 RBBP6Q7Z6E9 1792 aaKnown RBP17.83■□□□□ 0.45
UBE3B-201ENST00000340074 SLC15A5A6NIM6 579 aa17.83■□□□□ 0.45
UBE3B-201ENST00000340074 EPB41L2O43491 1005 aaKnown RBP17.83■□□□□ 0.45
UBE3B-201ENST00000340074 STRNO43815 780 aa17.83■□□□□ 0.45
UBE3B-201ENST00000340074 CAPN15O75808 1086 aa17.83■□□□□ 0.45
UBE3B-201ENST00000340074 PARP1P09874 1014 aaKnown RBP17.83■□□□□ 0.45
UBE3B-201ENST00000340074 OAZ1P54368 228 aa17.83■□□□□ 0.45
UBE3B-201ENST00000340074 GRB14Q14449 540 aa17.83■□□□□ 0.45
UBE3B-201ENST00000340074 ASPRV1Q53RT3 343 aa17.83■□□□□ 0.45
UBE3B-201ENST00000340074 CCDC174Q6PII3 467 aa17.83■□□□□ 0.45
UBE3B-201ENST00000340074 SLAIN1Q8ND83 568 aa17.83■□□□□ 0.45
UBE3B-201ENST00000340074 TMEM87BQ96K49 555 aa17.83■□□□□ 0.45
UBE3B-201ENST00000340074 MTA3Q9BTC8 594 aa17.83■□□□□ 0.45
UBE3B-201ENST00000340074 LRRC2Q9BYS8 371 aa17.83■□□□□ 0.45
UBE3B-201ENST00000340074 CPVLQ9H3G5 476 aa17.83■□□□□ 0.45
UBE3B-201ENST00000340074 ZNF536O15090 1300 aa17.83■□□□□ 0.44
UBE3B-201ENST00000340074 SH2B2O14492 632 aaPredicted RBP17.82■□□□□ 0.44
UBE3B-201ENST00000340074 COPB2P35606 906 aa17.82■□□□□ 0.44
UBE3B-201ENST00000340074 RGS2P41220 211 aa17.82■□□□□ 0.44
UBE3B-201ENST00000340074 MAP2K5Q13163 448 aa17.82■□□□□ 0.44
UBE3B-201ENST00000340074 PXYLP1Q8TE99 480 aa17.82■□□□□ 0.44
UBE3B-201ENST00000340074 ZNF333Q96JL9 665 aa17.82■□□□□ 0.44
UBE3B-201ENST00000340074 UBA5Q9GZZ9 404 aa17.82■□□□□ 0.44
UBE3B-201ENST00000340074 RANBP17Q9H2T7 1088 aaKnown RBP17.82■□□□□ 0.44
UBE3B-201ENST00000340074 MYCP01106 439 aaPredicted RBP17.81■□□□□ 0.44
UBE3B-201ENST00000340074 XRCC5P13010 732 aaKnown RBP17.81■□□□□ 0.44
UBE3B-201ENST00000340074 ADORA2AP29274 412 aa17.81■□□□□ 0.44
UBE3B-201ENST00000340074 DHX32Q7L7V1 743 aaKnown RBP17.81■□□□□ 0.44
UBE3B-201ENST00000340074 STAG2Q8N3U4 1231 aa17.81■□□□□ 0.44
UBE3B-201ENST00000340074 AGBL1Q96MI9 1066 aa17.81■□□□□ 0.44
UBE3B-201ENST00000340074 TCEANC2Q96MN5 208 aa17.81■□□□□ 0.44
UBE3B-201ENST00000340074 BIN2Q9UBW5 565 aaPredicted RBP17.81■□□□□ 0.44
UBE3B-201ENST00000340074 KIAA0100Q14667 2235 aaKnown RBP17.81■□□□□ 0.44
UBE3B-201ENST00000340074 FCER1AP12319 257 aa17.81■□□□□ 0.44
UBE3B-201ENST00000340074 EXOSC10Q01780 885 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms