RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 PTPDC1A2A3K4 754 aa17.1■□□□□ 0.33
CSRP1-201ENST00000340006 HOMER1Q86YM7 354 aa17.1■□□□□ 0.33
CSRP1-201ENST00000340006 NSUN7Q8NE18 718 aaKnown RBP17.1■□□□□ 0.33
CSRP1-201ENST00000340006 ORC3Q9UBD5 711 aaPredicted RBP17.1■□□□□ 0.33
CSRP1-201ENST00000340006 PTPRFP10586 1907 aa17.1■□□□□ 0.33
CSRP1-201ENST00000340006 MYH6P13533 1939 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 CCL15-CCL14A0A0B4J2E2 113 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 USP17L15C9J2P7 530 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 USP17L13C9JLJ4 530 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 USP17L11C9JVI0 530 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 USP17L18D6R9N7 530 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 USP17L22D6RA61 530 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 USP17L17D6RBQ6 530 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 USP17L19D6RCP7 530 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 USP17L20D6RJB6 530 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 SMARCA1P28370 1054 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 GJB2P29033 226 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 USP17L24Q0WX57 530 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 CCL15Q16663 113 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 TREML2Q5T2D2 321 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 FAM160B2Q86V87 743 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 RASAL3Q86YV0 1011 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 PRPF38AQ8NAV1 312 aaKnown RBP17.09■□□□□ 0.33
CSRP1-201ENST00000340006 RRP36Q96EU6 259 aaKnown RBP17.09■□□□□ 0.33
CSRP1-201ENST00000340006 FBXO28Q9NVF7 368 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 CTDP1Q9Y5B0 961 aaPredicted RBP17.09■□□□□ 0.33
CSRP1-201ENST00000340006 HMGN5P82970 282 aaKnown RBP17.09■□□□□ 0.33
CSRP1-201ENST00000340006 COG2Q14746 738 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 SYDE2Q5VT97 1194 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 HHIPL1Q96JK4 782 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 HOXC10Q9NYD6 342 aa17.09■□□□□ 0.33
CSRP1-201ENST00000340006 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
CSRP1-201ENST00000340006 PRPF3O43395 683 aaKnown RBP17.08■□□□□ 0.33
CSRP1-201ENST00000340006 CYTH3O43739 400 aa17.08■□□□□ 0.33
CSRP1-201ENST00000340006 FMNL1O95466 1100 aaPredicted RBP17.08■□□□□ 0.33
CSRP1-201ENST00000340006 PABPC4Q13310 644 aaKnown RBP eCLIP17.08■□□□□ 0.332e-7■■■□□ 14.8
CSRP1-201ENST00000340006 CYP4F22Q6NT55 531 aa17.08■□□□□ 0.33
CSRP1-201ENST00000340006 CATSPERGQ6ZRH7 1159 aa17.08■□□□□ 0.33
CSRP1-201ENST00000340006 MS4A4AQ96JQ5 239 aa17.08■□□□□ 0.33
CSRP1-201ENST00000340006 SLF1Q9BQI6 1058 aa17.08■□□□□ 0.33
CSRP1-201ENST00000340006 SPZ1Q9BXG8 430 aa17.08■□□□□ 0.33
CSRP1-201ENST00000340006 RIOX1Q9H6W3 641 aa17.08■□□□□ 0.33
CSRP1-201ENST00000340006 PRR12Q9ULL5 1215 aa17.08■□□□□ 0.33
CSRP1-201ENST00000340006 DDIT3P35638 169 aa17.08■□□□□ 0.32
CSRP1-201ENST00000340006 SNAP25P60880 206 aa17.08■□□□□ 0.32
CSRP1-201ENST00000340006 FUT2Q10981 343 aa17.08■□□□□ 0.32
CSRP1-201ENST00000340006 BTNL9Q6UXG8 535 aa17.08■□□□□ 0.32
CSRP1-201ENST00000340006 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.32
CSRP1-201ENST00000340006 PIGSQ96S52 555 aa17.08■□□□□ 0.32
CSRP1-201ENST00000340006 RNF26Q9BY78 433 aaPredicted RBP17.08■□□□□ 0.32
CSRP1-201ENST00000340006 JMJD4Q9H9V9 463 aa17.08■□□□□ 0.32
CSRP1-201ENST00000340006 AGTPBP1Q9UPW5 1226 aa17.08■□□□□ 0.32
CSRP1-201ENST00000340006 KIF3AQ9Y496 699 aa17.08■□□□□ 0.32
CSRP1-201ENST00000340006 PLA2G6O60733 806 aa17.07■□□□□ 0.32
CSRP1-201ENST00000340006 SLC10A3P09131 477 aa17.07■□□□□ 0.32
CSRP1-201ENST00000340006 OSBPP22059 807 aa17.07■□□□□ 0.32
CSRP1-201ENST00000340006 IRX3P78415 501 aaPredicted RBP17.07■□□□□ 0.32
CSRP1-201ENST00000340006 WASF1Q92558 559 aa17.07■□□□□ 0.32
CSRP1-201ENST00000340006 CWC22Q9HCG8 908 aaKnown RBP17.07■□□□□ 0.32
CSRP1-201ENST00000340006 MANSC4A6NHS7 340 aaPredicted RBP17.06■□□□□ 0.32
CSRP1-201ENST00000340006 DEXIO95424 95 aa17.06■□□□□ 0.32
CSRP1-201ENST00000340006 RBM27Q9P2N5 1060 aaKnown RBP17.06■□□□□ 0.32
CSRP1-201ENST00000340006 CNTNAP5Q8WYK1 1306 aa17.06■□□□□ 0.32
CSRP1-201ENST00000340006 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
CSRP1-201ENST00000340006 HOXA7P31268 230 aaPredicted RBP17.06■□□□□ 0.32
CSRP1-201ENST00000340006 FOSBP53539 338 aa17.06■□□□□ 0.32
CSRP1-201ENST00000340006 INHBEP58166 350 aa17.06■□□□□ 0.32
CSRP1-201ENST00000340006 SLC35G1Q2M3R5 365 aa17.06■□□□□ 0.32
CSRP1-201ENST00000340006 LARP1BQ659C4 914 aaKnown RBP17.06■□□□□ 0.32
CSRP1-201ENST00000340006 PNMA6FA0A0J9YX94 578 aa17.05■□□□□ 0.32
CSRP1-201ENST00000340006 FAM155AB1AL88 458 aaPredicted RBP17.05■□□□□ 0.32
CSRP1-201ENST00000340006 ZBTB5O15062 677 aa17.05■□□□□ 0.32
CSRP1-201ENST00000340006 ZBED4O75132 1171 aa17.05■□□□□ 0.32
CSRP1-201ENST00000340006 MOGSQ13724 837 aa17.05■□□□□ 0.32
CSRP1-201ENST00000340006 GPAT2Q6NUI2 795 aa17.05■□□□□ 0.32
CSRP1-201ENST00000340006 CCDC174Q6PII3 467 aa17.05■□□□□ 0.32
CSRP1-201ENST00000340006 BRI3BPQ8WY22 251 aa17.05■□□□□ 0.32
CSRP1-201ENST00000340006 ALG1Q9BT22 464 aa17.05■□□□□ 0.32
CSRP1-201ENST00000340006 CHMP5Q9NZZ3 219 aa17.05■□□□□ 0.32
CSRP1-201ENST00000340006 PPP1R9AQ9ULJ8 1098 aa17.05■□□□□ 0.32
CSRP1-201ENST00000340006 BTBD19C9JJ37 291 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 PDHXO00330 501 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 DSG3P32926 999 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 HTRA3P83110 453 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 CDC37Q16543 378 aaPredicted RBP17.04■□□□□ 0.32
CSRP1-201ENST00000340006 P2RX7Q99572 595 aaKnown RBP17.04■□□□□ 0.32
CSRP1-201ENST00000340006 ASCC2Q9H1I8 757 aaPredicted RBP17.04■□□□□ 0.32
CSRP1-201ENST00000340006 RASSF10A6NK89 507 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 SCG2P13521 617 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 XBP1P17861 261 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 TRIM29Q14134 588 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 OTUD7BQ6GQQ9 843 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 HEATR3Q7Z4Q2 680 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 CPXCR1Q8N123 301 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 CAPNS2Q96L46 248 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 AIFM3Q96NN9 605 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 PNMA3Q9UL41 463 aa17.04■□□□□ 0.32
CSRP1-201ENST00000340006 CIZ1Q9ULV3 898 aaPredicted RBP17.04■□□□□ 0.32
CSRP1-201ENST00000340006 STK36Q9NRP7 1315 aa17.03■□□□□ 0.32
CSRP1-201ENST00000340006 PDCP20941 246 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms