RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 EIF4A2Q14240 407 aaKnown RBP4.58□□□□□ -1.68
NEDD4-201ENST00000338963 ZNF268Q14587 947 aaPredicted RBP4.58□□□□□ -1.68
NEDD4-201ENST00000338963 FKBP15Q5T1M5 1219 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 AOPEPQ8N6M6 819 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 DHX58Q96C10 678 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 RHOXF2Q9BQY4 288 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 NLRP2Q9NX02 1062 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 SLC5A4Q9NY91 659 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 CABP1Q9NZU7 370 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 ZMAT5Q9UDW3 170 aaKnown RBP4.58□□□□□ -1.68
NEDD4-201ENST00000338963 STAG3Q9UJ98 1225 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 MACROD2A1Z1Q3 448 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 E7EVH7 732 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 SYF2O95926 243 aaKnown RBP4.58□□□□□ -1.68
NEDD4-201ENST00000338963 TRIM27P14373 513 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 NR1D1P20393 614 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 ATP6V1C1P21283 382 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 TNFRSF8P28908 595 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 PI16Q6UXB8 463 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 GDAP1Q8TB36 358 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 DQX1Q8TE96 717 aaKnown RBP4.58□□□□□ -1.68
NEDD4-201ENST00000338963 TIPINQ9BVW5 301 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 CYP46A1Q9Y6A2 500 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 FANCD2Q9BXW9 1451 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 IQANK1A0A1B0GTG1 560 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 POTEFA5A3E0 1075 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 VSNL1P62760 191 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 FANCCQ00597 558 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 PABPC1LQ4VXU2 614 aaKnown RBP4.58□□□□□ -1.68
NEDD4-201ENST00000338963 KAZNQ674X7 775 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 RUFY3Q7L099 469 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 PLEKHM2Q8IWE5 1019 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 MYCBPAPQ8TBZ2 947 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 CYFIP2Q96F07 1278 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 PRAM1Q96QH2 718 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 NUF2Q9BZD4 464 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 OSBPL3Q9H4L5 887 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 HAUS4Q9H6D7 363 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 SEPT11Q9NVA2 429 aaKnown RBP4.58□□□□□ -1.68
NEDD4-201ENST00000338963 PRELID1Q9Y255 219 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 KDM2AQ9Y2K7 1162 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 RABGAP1Q9Y3P9 1069 aa4.58□□□□□ -1.68
NEDD4-201ENST00000338963 ZNF608Q9ULD9 1512 aaPredicted RBP4.58□□□□□ -1.68
NEDD4-201ENST00000338963 YTHDC2Q9H6S0 1430 aaKnown RBP4.57□□□□□ -1.68
NEDD4-201ENST00000338963 TTC21AQ8NDW8 1320 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 GOLGA8CPA6NN73 597 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 GJB2P29033 226 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 HOXA10P31260 410 aaPredicted RBP4.57□□□□□ -1.68
NEDD4-201ENST00000338963 S100A5P33763 92 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 RASSF2P50749 326 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 HNRNPMP52272 730 aaKnown RBP eCLIP4.57□□□□□ -1.68
NEDD4-201ENST00000338963 SKIDA1Q1XH10 827 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 MUM1Q2TAK8 710 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 NUTM2GQ5VZR2 741 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 CLIC6Q96NY7 704 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 PHF23Q9BUL5 403 aaPredicted RBP4.57□□□□□ -1.68
NEDD4-201ENST00000338963 SELENOOQ9BVL4 669 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 TSKSQ9UJT2 592 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 MTMR6Q9Y217 621 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 FGD5Q6ZNL6 1462 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 ARHGAP10A1A4S6 786 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 UNCXA6NJT0 531 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 SKAP2O75563 359 aaPredicted RBP4.57□□□□□ -1.68
NEDD4-201ENST00000338963 GNAI3P08754 354 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 MYL5Q02045 173 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 DNM1Q05193 864 aaKnown RBP4.57□□□□□ -1.68
NEDD4-201ENST00000338963 PPP1R15BQ5SWA1 713 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 LMOD2Q6P5Q4 547 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 C6orf89Q6UWU4 347 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 UNC13DQ70J99 1090 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 IFT20Q8IY31 132 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 SPIRE2Q8WWL2 714 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 SNF8Q96H20 258 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 ATP6V1G3Q96LB4 118 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 GSDMAQ96QA5 445 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 ESYT1Q9BSJ8 1104 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 TXLNGQ9NUQ3 528 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 IFNKQ9P0W0 207 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 BTBD7Q9P203 1132 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 PUF60Q9UHX1 559 aaKnown RBP4.57□□□□□ -1.68
NEDD4-201ENST00000338963 CHIC2Q9UKJ5 165 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 ZNF652Q9Y2D9 606 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 PTPRKQ15262 1439 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 A0A0G2JS52 829 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 H3BQV1 296 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 ALADP13716 330 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 TMED10P49755 219 aaKnown RBP4.57□□□□□ -1.68
NEDD4-201ENST00000338963 SCNN1BP51168 640 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 NLRP12P59046 1061 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 KRT83P78385 493 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 PPIDQ08752 370 aaKnown RBP4.57□□□□□ -1.68
NEDD4-201ENST00000338963 IFFO2Q5TF58 517 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 DAB2IPQ5VWQ8 1189 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 TMEM53Q6P2H8 277 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 SND1Q7KZF4 910 aaKnown RBP eCLIP4.57□□□□□ -1.68
NEDD4-201ENST00000338963 ERICH1Q86X53 443 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 PAF1Q8N7H5 531 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 PTPRN2Q92932 1015 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 NACC2Q96BF6 587 aa4.57□□□□□ -1.68
NEDD4-201ENST00000338963 LENG1Q96BZ8 264 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms