RNA–Protein interactions for RNA: ENST00000338150.8

CAGE1-202, Transcript of cancer antigen 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAGE1, Length 2,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-202ENST00000338150 PRDM16Q9HAZ2 1276 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 NYAP2Q9P242 653 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 NID2Q14112 1375 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 SCG2P13521 617 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.09□□□□□ -0.79
CAGE1-202ENST00000338150 KIFC2Q96AC6 838 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 KLRG1Q96E93 195 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 USP28Q96RU2 1077 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 RNF26Q9BY78 433 aaPredicted RBP10.09□□□□□ -0.79
CAGE1-202ENST00000338150 COL2A1P02458 1487 aaPredicted RBP10.09□□□□□ -0.79
CAGE1-202ENST00000338150 PRPF3O43395 683 aaKnown RBP10.09□□□□□ -0.79
CAGE1-202ENST00000338150 TBC1D12O60347 775 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 ASNSP08243 561 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 HMGCS2P54868 508 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 TRIM29Q14134 588 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 CCDC174Q6PII3 467 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 WNK4Q96J92 1243 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 GBP4Q96PP9 640 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 RBM27Q9P2N5 1060 aaKnown RBP10.09□□□□□ -0.79
CAGE1-202ENST00000338150 CLIC4Q9Y696 253 aa10.09□□□□□ -0.79
CAGE1-202ENST00000338150 SNHG28P0DPA3 235 aa10.08□□□□□ -0.8
CAGE1-202ENST00000338150 MAP3K10Q02779 954 aa10.08□□□□□ -0.8
CAGE1-202ENST00000338150 NPY5RQ15761 445 aa10.08□□□□□ -0.8
CAGE1-202ENST00000338150 CCDC178Q5BJE1 867 aa10.08□□□□□ -0.8
CAGE1-202ENST00000338150 ARHGEF10LQ9HCE6 1279 aa10.08□□□□□ -0.8
CAGE1-202ENST00000338150 ATAD5Q96QE3 1844 aa10.08□□□□□ -0.8
CAGE1-202ENST00000338150 PTPRAP18433 802 aa10.08□□□□□ -0.8
CAGE1-202ENST00000338150 NLRP5P59047 1200 aa10.08□□□□□ -0.8
CAGE1-202ENST00000338150 PFKFB3Q16875 520 aaPredicted RBP10.08□□□□□ -0.8
CAGE1-202ENST00000338150 USP50Q70EL3 339 aaPredicted RBP10.08□□□□□ -0.8
CAGE1-202ENST00000338150 OTUD5Q96G74 571 aa10.08□□□□□ -0.8
CAGE1-202ENST00000338150 TMEM260Q9NX78 707 aa10.08□□□□□ -0.8
CAGE1-202ENST00000338150 TMX2Q9Y320 296 aa10.08□□□□□ -0.8
CAGE1-202ENST00000338150 MMP1P03956 469 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 BMP3P12645 472 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 UBE2SQ16763 222 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 DCAF15Q66K64 600 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 SCYL3Q8IZE3 742 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 MKL1Q969V6 931 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 TANGO6Q9C0B7 1094 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 PICK1Q9NRD5 415 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 LMBRD1Q9NUN5 540 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 STK36Q9NRP7 1315 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 STXBP3O00186 592 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 CTNND1O60716 968 aaKnown RBP10.07□□□□□ -0.8
CAGE1-202ENST00000338150 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
CAGE1-202ENST00000338150 NAPAP54920 295 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 QRICH1Q2TAL8 776 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.07□□□□□ -0.8
CAGE1-202ENST00000338150 RRP36Q96EU6 259 aaKnown RBP10.07□□□□□ -0.8
CAGE1-202ENST00000338150 EMILIN3Q9NT22 766 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 KIF3AQ9Y496 699 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 SNCAIPQ9Y6H5 919 aa10.07□□□□□ -0.8
CAGE1-202ENST00000338150 IQCA1LA6NCM1 817 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 MARCKSP29966 332 aaPredicted RBP10.06□□□□□ -0.8
CAGE1-202ENST00000338150 RCAN1P53805 252 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 CDC37Q16543 378 aaPredicted RBP10.06□□□□□ -0.8
CAGE1-202ENST00000338150 SUPT20HL1Q3ZLR7 823 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 ASPRV1Q53RT3 343 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 PIK3AP1Q6ZUJ8 805 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 GPT2Q8TD30 523 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 VCPKMTQ9H867 229 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 BIN2Q9UBW5 565 aaPredicted RBP10.06□□□□□ -0.8
CAGE1-202ENST00000338150 SEC63Q9UGP8 760 aaKnown RBP10.06□□□□□ -0.8
CAGE1-202ENST00000338150 JAKMIP3Q5VZ66 844 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 CPXCR1Q8N123 301 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 PHF20Q9BVI0 1012 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 SPZ1Q9BXG8 430 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 RIOX1Q9H6W3 641 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 HOMER2Q9NSB8 354 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 PRR12Q9ULL5 1215 aa10.06□□□□□ -0.8
CAGE1-202ENST00000338150 VCAM1P19320 739 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 TOB1P50616 345 aaPredicted RBP10.05□□□□□ -0.8
CAGE1-202ENST00000338150 SPECC1Q5M775 1068 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 MYSM1Q5VVJ2 828 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 TBC1D5Q92609 795 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 ZNF112Q9UJU3 913 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 PCDHB6Q9Y5E3 794 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 PITPNM2Q9BZ72 1349 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 BRCA2P51587 3418 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 USP17L15C9J2P7 530 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 USP17L13C9JLJ4 530 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 USP17L11C9JVI0 530 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 USP17L18D6R9N7 530 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 USP17L22D6RA61 530 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 USP17L17D6RBQ6 530 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 USP17L19D6RCP7 530 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 USP17L20D6RJB6 530 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 IRF6O14896 467 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 TRAK2O60296 914 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 GNAQP50148 359 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 USP17L24Q0WX57 530 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 SYDE2Q5VT97 1194 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 USP17L6PQ6QN14 398 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 GMCL1P1Q8NEA9 526 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 RPAP3Q9H6T3 665 aaPredicted RBP10.05□□□□□ -0.8
CAGE1-202ENST00000338150 GOPCQ9HD26 462 aa10.05□□□□□ -0.8
CAGE1-202ENST00000338150 DDX49Q9Y6V7 483 aaKnown RBP10.05□□□□□ -0.8
CAGE1-202ENST00000338150 SMCO2A6NFE2 343 aa10.04□□□□□ -0.8
CAGE1-202ENST00000338150 PPP1R12BO60237 982 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms