RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 SMARCA1P28370 1054 aa17.92■□□□□ 0.46
SEC13-201ENST00000337354 RABEP1Q15276 862 aa17.92■□□□□ 0.46
SEC13-201ENST00000337354 FANCBQ8NB91 859 aa17.92■□□□□ 0.46
SEC13-201ENST00000337354 KIFC2Q96AC6 838 aa17.92■□□□□ 0.46
SEC13-201ENST00000337354 LZTS2Q9BRK4 669 aa17.92■□□□□ 0.46
SEC13-201ENST00000337354 GPCPD1Q9NPB8 672 aa17.92■□□□□ 0.46
SEC13-201ENST00000337354 FBXO28Q9NVF7 368 aa17.92■□□□□ 0.46
SEC13-201ENST00000337354 RBPJLQ9UBG7 517 aa17.92■□□□□ 0.46
SEC13-201ENST00000337354 MORF4L1Q9UBU8 362 aa17.92■□□□□ 0.46
SEC13-201ENST00000337354 MAD2L2Q9UI95 211 aa17.92■□□□□ 0.46
SEC13-201ENST00000337354 BRPF3Q9ULD4 1205 aa17.92■□□□□ 0.46
SEC13-201ENST00000337354 FRMPD2Q68DX3 1309 aaPredicted RBP17.92■□□□□ 0.46
SEC13-201ENST00000337354 ADGRA2Q96PE1 1338 aa17.92■□□□□ 0.46
SEC13-201ENST00000337354 KLRF2D3W0D1 207 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 VWA5AO00534 786 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 ZBED4O75132 1171 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 BCRP11274 1271 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 TOB2Q14106 344 aaPredicted RBP17.91■□□□□ 0.46
SEC13-201ENST00000337354 FAM110CQ1W6H9 321 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 GPRC5AQ8NFJ5 357 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 CHMP4CQ96CF2 233 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 ZNF274Q96GC6 653 aaPredicted RBP17.91■□□□□ 0.46
SEC13-201ENST00000337354 CPA4Q9UI42 421 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 CCDC196A0A1B0GTZ2 297 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 GPR25O00155 361 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 GOLGA8HP0CJ92 632 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 APOBRQ0VD83 1088 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 SYDE2Q5VT97 1194 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 TTBK2Q6IQ55 1244 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 ANKRD13CQ8N6S4 541 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 ATG4CQ96DT6 458 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 R3HDMLQ9H3Y0 253 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 RBM28Q9NW13 759 aaKnown RBP17.91■□□□□ 0.46
SEC13-201ENST00000337354 PNMA2Q9UL42 364 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 PRR12Q9ULL5 1215 aa17.91■□□□□ 0.46
SEC13-201ENST00000337354 CTDP1Q9Y5B0 961 aaPredicted RBP17.91■□□□□ 0.46
SEC13-201ENST00000337354 ATP2A1O14983 1001 aa17.9■□□□□ 0.46
SEC13-201ENST00000337354 OAZ1P54368 228 aa17.9■□□□□ 0.46
SEC13-201ENST00000337354 SP3Q02447 781 aa17.9■□□□□ 0.46
SEC13-201ENST00000337354 RASGRP2Q7LDG7 609 aa17.9■□□□□ 0.46
SEC13-201ENST00000337354 MICU3Q86XE3 530 aa17.9■□□□□ 0.46
SEC13-201ENST00000337354 STAG2Q8N3U4 1231 aa17.9■□□□□ 0.46
SEC13-201ENST00000337354 MYL10Q9BUA6 226 aa17.9■□□□□ 0.46
SEC13-201ENST00000337354 SLC38A10Q9HBR0 1119 aa17.9■□□□□ 0.46
SEC13-201ENST00000337354 PDIA3P30101 505 aaKnown RBP17.89■□□□□ 0.45
SEC13-201ENST00000337354 SLC16A2P36021 539 aa17.89■□□□□ 0.45
SEC13-201ENST00000337354 AK2P54819 239 aa17.89■□□□□ 0.45
SEC13-201ENST00000337354 CCNA1P78396 465 aa17.89■□□□□ 0.45
SEC13-201ENST00000337354 POTEEQ6S8J3 1075 aa17.89■□□□□ 0.45
SEC13-201ENST00000337354 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.45
SEC13-201ENST00000337354 ZNF296Q8WUU4 475 aaPredicted RBP17.89■□□□□ 0.45
SEC13-201ENST00000337354 UBA5Q9GZZ9 404 aa17.89■□□□□ 0.45
SEC13-201ENST00000337354 TXNRD2Q9NNW7 524 aa17.89■□□□□ 0.45
SEC13-201ENST00000337354 NAP1L2Q9ULW6 460 aaPredicted RBP17.89■□□□□ 0.45
SEC13-201ENST00000337354 ST18O60284 1047 aa17.88■□□□□ 0.45
SEC13-201ENST00000337354 FKTNO75072 461 aa17.88■□□□□ 0.45
SEC13-201ENST00000337354 METAP2P50579 478 aaKnown RBP eCLIP17.88■□□□□ 0.451e-7■■□□□ 13.6
SEC13-201ENST00000337354 ERVK-9P63128 1117 aa17.88■□□□□ 0.45
SEC13-201ENST00000337354 ERVK-24P63145 666 aa17.88■□□□□ 0.45
SEC13-201ENST00000337354 ARHGEF6Q15052 776 aa17.88■□□□□ 0.45
SEC13-201ENST00000337354 RTN1Q16799 776 aa17.88■□□□□ 0.45
SEC13-201ENST00000337354 ADGRF4Q8IZF3 695 aa17.88■□□□□ 0.45
SEC13-201ENST00000337354 PAGR1Q9BTK6 254 aa17.88■□□□□ 0.45
SEC13-201ENST00000337354 RANBP17Q9H2T7 1088 aaKnown RBP17.88■□□□□ 0.45
SEC13-201ENST00000337354 RIOX1Q9H6W3 641 aa17.88■□□□□ 0.45
SEC13-201ENST00000337354 BTBD7Q9P203 1132 aa17.88■□□□□ 0.45
SEC13-201ENST00000337354 GOLGA8AA7E2F4 631 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 GOLGA8BA8MQT2 603 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 CNMDO75829 334 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 SLC25A27O95847 323 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 RXRAP19793 462 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 COPB2P35606 906 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 STAT3P40763 770 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 TMEM132BQ14DG7 1078 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 Q3C1V9 767 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 REPS2Q8NFH8 660 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 TEX13BQ9BXU2 312 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 SPATC1LQ9H0A9 340 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 HPS5Q9UPZ3 1129 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 ZSWIM8A7E2V4 1837 aa17.87■□□□□ 0.45
SEC13-201ENST00000337354 DHX16O60231 1041 aaKnown RBP17.86■□□□□ 0.45
SEC13-201ENST00000337354 TRAF1Q13077 416 aa17.86■□□□□ 0.45
SEC13-201ENST00000337354 KIF22Q14807 665 aa17.86■□□□□ 0.45
SEC13-201ENST00000337354 RIOX2Q8IUF8 465 aa17.86■□□□□ 0.45
SEC13-201ENST00000337354 CCDC144CPQ8IYA2 1237 aa17.86■□□□□ 0.45
SEC13-201ENST00000337354 SHCBP1Q8NEM2 672 aa17.86■□□□□ 0.45
SEC13-201ENST00000337354 ERO1AQ96HE7 468 aa17.86■□□□□ 0.45
SEC13-201ENST00000337354 SPZ1Q9BXG8 430 aa17.86■□□□□ 0.45
SEC13-201ENST00000337354 JMJD4Q9H9V9 463 aa17.86■□□□□ 0.45
SEC13-201ENST00000337354 ZNF214Q9UL59 606 aaPredicted RBP17.86■□□□□ 0.45
SEC13-201ENST00000337354 LIMCH1Q9UPQ0 1083 aa17.86■□□□□ 0.45
SEC13-201ENST00000337354 NID2Q14112 1375 aa17.86■□□□□ 0.45
SEC13-201ENST00000337354 ICAM1P05362 532 aa17.85■□□□□ 0.45
SEC13-201ENST00000337354 MAPK4P31152 587 aa17.85■□□□□ 0.45
SEC13-201ENST00000337354 MCM2P49736 904 aa17.85■□□□□ 0.45
SEC13-201ENST00000337354 LACTBP83111 547 aaPredicted RBP17.85■□□□□ 0.45
SEC13-201ENST00000337354 PLS1Q14651 629 aa17.85■□□□□ 0.45
SEC13-201ENST00000337354 TMTC3Q6ZXV5 915 aa17.85■□□□□ 0.45
SEC13-201ENST00000337354 CCAR1Q8IX12 1150 aaKnown RBP17.85■□□□□ 0.45
SEC13-201ENST00000337354 MTMR8Q96EF0 704 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms