RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 TEX11Q8IYF3 940 aa16.78■□□□□ 0.28
UBA1-201ENST00000335972 RPGRQ92834 1020 aaKnown RBP16.78■□□□□ 0.28
UBA1-201ENST00000335972 LRRC4BQ9NT99 713 aa16.78■□□□□ 0.28
UBA1-201ENST00000335972 PUF60Q9UHX1 559 aaKnown RBP16.78■□□□□ 0.28
UBA1-201ENST00000335972 SCN7AQ01118 1682 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 CCP110O43303 1012 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 GRAPQ13588 217 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 DTHD1Q6ZMT9 781 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 GRAPLQ8TC17 118 aaPredicted RBP16.77■□□□□ 0.28
UBA1-201ENST00000335972 NUP88Q99567 741 aaPredicted RBP16.77■□□□□ 0.28
UBA1-201ENST00000335972 FEZ1Q99689 392 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 MXD3Q9BW11 206 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 PRDM4Q9UKN5 801 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 PHLPP2Q6ZVD8 1323 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.77■□□□□ 0.28
UBA1-201ENST00000335972 PCP11498 1178 aaKnown RBP16.77■□□□□ 0.28
UBA1-201ENST00000335972 NAPAP54920 295 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 PAK1Q13153 545 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 FILIP1LQ4L180 1135 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 EYA3Q99504 573 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 TMEM260Q9NX78 707 aa16.77■□□□□ 0.28
UBA1-201ENST00000335972 COL22A1Q8NFW1 1626 aaPredicted RBP16.77■□□□□ 0.27
UBA1-201ENST00000335972 UBAP1LF5GYI3 381 aa16.77■□□□□ 0.27
UBA1-201ENST00000335972 BMP15O95972 392 aa16.77■□□□□ 0.27
UBA1-201ENST00000335972 UBA7P41226 1012 aa16.77■□□□□ 0.27
UBA1-201ENST00000335972 WDR66Q8TBY9 1149 aa16.77■□□□□ 0.27
UBA1-201ENST00000335972 BIN2Q9UBW5 565 aaPredicted RBP16.77■□□□□ 0.27
UBA1-201ENST00000335972 LAMB2P55268 1798 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 C6orf229H3BNL8 230 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 GTPBP6O43824 516 aaPredicted RBP16.76■□□□□ 0.27
UBA1-201ENST00000335972 BAG3O95817 575 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 GRM4Q14833 912 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 NAALADL2Q58DX5 795 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 IRS2Q9Y4H2 1338 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 KCNJ18B7U540 433 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 CCNT1O60563 726 aaKnown RBP16.76■□□□□ 0.27
UBA1-201ENST00000335972 KCNJ12Q14500 433 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 PRR5LQ6MZQ0 368 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 STXBP3O00186 592 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 RAD21O60216 631 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 CDK8P49336 464 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 MFSD14BQ5SR56 506 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 DGKHQ86XP1 1220 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 AMOTL1Q8IY63 956 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 CD209Q9NNX6 404 aa16.76■□□□□ 0.27
UBA1-201ENST00000335972 CASZ1Q86V15 1759 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 NKRFO15226 690 aaKnown RBP eCLIP16.75■□□□□ 0.27
UBA1-201ENST00000335972 MYO1BO43795 1136 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 MFAP3LO75121 409 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 CALML3P27482 149 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 COPB1P53618 953 aaKnown RBP16.75■□□□□ 0.27
UBA1-201ENST00000335972 UBXN1Q04323 297 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 VPS72Q15906 364 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 ZNF569Q5MCW4 686 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 ZNF804AQ7Z570 1209 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 LRRC47Q8N1G4 583 aaKnown RBP16.75■□□□□ 0.27
UBA1-201ENST00000335972 GJA10Q969M2 543 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 PIGSQ96S52 555 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 SLF1Q9BQI6 1058 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 ADGRG1Q9Y653 693 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 TADA3O75528 432 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 CCDC175P0C221 793 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 TXLNAP40222 546 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 PPP2R3AQ06190 1150 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 DMTNQ08495 405 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 RTFDC1Q9BY42 306 aaPredicted RBP16.75■□□□□ 0.27
UBA1-201ENST00000335972 DISC1Q9NRI5 854 aa16.75■□□□□ 0.27
UBA1-201ENST00000335972 COL5A3P25940 1745 aaPredicted RBP16.75■□□□□ 0.27
UBA1-201ENST00000335972 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
UBA1-201ENST00000335972 TECP42680 631 aa16.74■□□□□ 0.27
UBA1-201ENST00000335972 CEP95Q96GE4 821 aa16.74■□□□□ 0.27
UBA1-201ENST00000335972 CHP1Q99653 195 aa16.74■□□□□ 0.27
UBA1-201ENST00000335972 TRIM10Q9UDY6 481 aa16.74■□□□□ 0.27
UBA1-201ENST00000335972 RREB1Q92766 1687 aa16.74■□□□□ 0.27
UBA1-201ENST00000335972 ERVK-24P63145 666 aa16.74■□□□□ 0.27
UBA1-201ENST00000335972 ATP2B2Q01814 1243 aa16.74■□□□□ 0.27
UBA1-201ENST00000335972 CCDC178Q5BJE1 867 aa16.74■□□□□ 0.27
UBA1-201ENST00000335972 KIFC2Q96AC6 838 aa16.74■□□□□ 0.27
UBA1-201ENST00000335972 SMCO2A6NFE2 343 aa16.74■□□□□ 0.27
UBA1-201ENST00000335972 RC3H1Q5TC82 1133 aaKnown RBP16.74■□□□□ 0.27
UBA1-201ENST00000335972 ZNF771Q7L3S4 317 aaPredicted RBP16.74■□□□□ 0.27
UBA1-201ENST00000335972 COA7Q96BR5 231 aa16.74■□□□□ 0.27
UBA1-201ENST00000335972 H2AFXP16104 143 aaPredicted RBP16.73■□□□□ 0.27
UBA1-201ENST00000335972 PBX1P40424 430 aa16.73■□□□□ 0.27
UBA1-201ENST00000335972 KLK7P49862 253 aa16.73■□□□□ 0.27
UBA1-201ENST00000335972 TCP11X2Q5H9J9 407 aa16.73■□□□□ 0.27
UBA1-201ENST00000335972 SRRTQ9BXP5 876 aaKnown RBP16.73■□□□□ 0.27
UBA1-201ENST00000335972 MORC2Q9Y6X9 1032 aaPredicted RBP16.73■□□□□ 0.27
UBA1-201ENST00000335972 TNRC6CQ9HCJ0 1690 aaKnown RBP16.73■□□□□ 0.27
UBA1-201ENST00000335972 TXNRD1Q16881 649 aa16.73■□□□□ 0.27
UBA1-201ENST00000335972 ZNF658Q5TYW1 1059 aaPredicted RBP16.73■□□□□ 0.27
UBA1-201ENST00000335972 GPCPD1Q9NPB8 672 aa16.73■□□□□ 0.27
UBA1-201ENST00000335972 POLLQ9UGP5 575 aa16.73■□□□□ 0.27
UBA1-201ENST00000335972 PLCG1P19174 1290 aa16.73■□□□□ 0.27
UBA1-201ENST00000335972 KRT9P35527 623 aa16.73■□□□□ 0.27
UBA1-201ENST00000335972 GTF2IP78347 998 aa16.73■□□□□ 0.27
UBA1-201ENST00000335972 KRT222Q8N1A0 295 aa16.73■□□□□ 0.27
UBA1-201ENST00000335972 TRIM47Q96LD4 638 aa16.73■□□□□ 0.27
UBA1-201ENST00000335972 FCER1AP12319 257 aa16.72■□□□□ 0.27
UBA1-201ENST00000335972 TRAPPC10P48553 1259 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms