RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TRIM22Q8IYM9 498 aa24.94■■□□□ 1.58
TPM1-204ENST00000334895 ADGRF4Q8IZF3 695 aa24.94■■□□□ 1.58
TPM1-204ENST00000334895 PIBF1Q8WXW3 757 aa24.94■■□□□ 1.58
TPM1-204ENST00000334895 RPAP3Q9H6T3 665 aaPredicted RBP24.94■■□□□ 1.58
TPM1-204ENST00000334895 JMJD4Q9H9V9 463 aa24.94■■□□□ 1.58
TPM1-204ENST00000334895 FBXO28Q9NVF7 368 aa24.94■■□□□ 1.58
TPM1-204ENST00000334895 RLFQ13129 1914 aa24.93■■□□□ 1.58
TPM1-204ENST00000334895 VAT1LQ9HCJ6 419 aa24.93■■□□□ 1.58
TPM1-204ENST00000334895 TMOD4Q9NZQ9 345 aa24.93■■□□□ 1.58
TPM1-204ENST00000334895 PLA2G6O60733 806 aa24.92■■□□□ 1.58
TPM1-204ENST00000334895 STAT2P52630 851 aa24.92■■□□□ 1.58
TPM1-204ENST00000334895 GRM1Q13255 1194 aa24.92■■□□□ 1.58
TPM1-204ENST00000334895 CYP4F22Q6NT55 531 aa24.92■■□□□ 1.58
TPM1-204ENST00000334895 MTMR8Q96EF0 704 aa24.92■■□□□ 1.58
TPM1-204ENST00000334895 HHIPL1Q96JK4 782 aa24.92■■□□□ 1.58
TPM1-204ENST00000334895 PIGSQ96S52 555 aa24.92■■□□□ 1.58
TPM1-204ENST00000334895 DEXIO95424 95 aa24.91■■□□□ 1.58
TPM1-204ENST00000334895 TREML2Q5T2D2 321 aa24.91■■□□□ 1.58
TPM1-204ENST00000334895 SYDE2Q5VT97 1194 aa24.91■■□□□ 1.58
TPM1-204ENST00000334895 SPRYD7Q5W111 196 aa24.91■■□□□ 1.58
TPM1-204ENST00000334895 RGMBQ6NW40 437 aa24.91■■□□□ 1.58
TPM1-204ENST00000334895 FAM184AQ8NB25 1140 aa24.91■■□□□ 1.58
TPM1-204ENST00000334895 FEM1BQ9UK73 627 aa24.91■■□□□ 1.58
TPM1-204ENST00000334895 PRR12Q9ULL5 1215 aa24.91■■□□□ 1.58
TPM1-204ENST00000334895 PCNTO95613 3336 aa24.91■■□□□ 1.58
TPM1-204ENST00000334895 DNAJC5GQ8N7S2 189 aa24.9■■□□□ 1.58
TPM1-204ENST00000334895 SHISA4Q96DD7 197 aa24.9■■□□□ 1.58
TPM1-204ENST00000334895 TANGO6Q9C0B7 1094 aa24.9■■□□□ 1.58
TPM1-204ENST00000334895 GJB4Q9NTQ9 266 aa24.9■■□□□ 1.58
TPM1-204ENST00000334895 SYT1P21579 422 aa24.9■■□□□ 1.58
TPM1-204ENST00000334895 ZNF157P51786 506 aaPredicted RBP24.9■■□□□ 1.58
TPM1-204ENST00000334895 MKRN3Q13064 507 aaKnown RBP24.9■■□□□ 1.58
TPM1-204ENST00000334895 IKQ13123 557 aaPredicted RBP24.9■■□□□ 1.58
TPM1-204ENST00000334895 SNAPC2Q13487 334 aa24.9■■□□□ 1.58
TPM1-204ENST00000334895 PKP1Q13835 747 aa24.9■■□□□ 1.58
TPM1-204ENST00000334895 PFKFB3Q16875 520 aaPredicted RBP24.9■■□□□ 1.58
TPM1-204ENST00000334895 HOMER1Q86YM7 354 aa24.9■■□□□ 1.58
TPM1-204ENST00000334895 RASAL3Q86YV0 1011 aa24.9■■□□□ 1.58
TPM1-204ENST00000334895 PROCA1Q8NCQ7 364 aaPredicted RBP24.9■■□□□ 1.58
TPM1-204ENST00000334895 MS4A4AQ96JQ5 239 aa24.9■■□□□ 1.58
TPM1-204ENST00000334895 ALG1Q9BT22 464 aa24.9■■□□□ 1.58
TPM1-204ENST00000334895 ZBTB48P10074 688 aaPredicted RBP24.89■■□□□ 1.57
TPM1-204ENST00000334895 FOSBP53539 338 aa24.89■■□□□ 1.57
TPM1-204ENST00000334895 AKAP17AQ02040 695 aaKnown RBP24.89■■□□□ 1.57
TPM1-204ENST00000334895 GADL1Q6ZQY3 521 aa24.89■■□□□ 1.57
TPM1-204ENST00000334895 FAM160B2Q86V87 743 aa24.89■■□□□ 1.57
TPM1-204ENST00000334895 CHURC1Q8WUH1 139 aa24.89■■□□□ 1.57
TPM1-204ENST00000334895 RRP36Q96EU6 259 aaKnown RBP24.89■■□□□ 1.57
TPM1-204ENST00000334895 THSD7BQ9C0I4 1608 aa24.88■■□□□ 1.57
TPM1-204ENST00000334895 SCG2P13521 617 aa24.88■■□□□ 1.57
TPM1-204ENST00000334895 VEGFBP49765 207 aa24.88■■□□□ 1.57
TPM1-204ENST00000334895 SNAP25P60880 206 aa24.88■■□□□ 1.57
TPM1-204ENST00000334895 LARP1BQ659C4 914 aaKnown RBP24.88■■□□□ 1.57
TPM1-204ENST00000334895 CATSPERGQ6ZRH7 1159 aa24.88■■□□□ 1.57
TPM1-204ENST00000334895 KIFC2Q96AC6 838 aa24.88■■□□□ 1.57
TPM1-204ENST00000334895 CAPNS2Q96L46 248 aa24.88■■□□□ 1.57
TPM1-204ENST00000334895 SLF1Q9BQI6 1058 aa24.88■■□□□ 1.57
TPM1-204ENST00000334895 RBM27Q9P2N5 1060 aaKnown RBP24.88■■□□□ 1.57
TPM1-204ENST00000334895 PPP1R11O60927 126 aaPredicted RBP24.87■■□□□ 1.57
TPM1-204ENST00000334895 FLOT1O75955 427 aa24.87■■□□□ 1.57
TPM1-204ENST00000334895 KIF3AQ9Y496 699 aa24.87■■□□□ 1.57
TPM1-204ENST00000334895 CDC37Q16543 378 aaPredicted RBP24.86■■□□□ 1.57
TPM1-204ENST00000334895 QRICH1Q2TAL8 776 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 OTUD7BQ6GQQ9 843 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 GPAT2Q6NUI2 795 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 GPKOWQ92917 476 aaPredicted RBP eCLIP24.86■■□□□ 1.57
TPM1-204ENST00000334895 PPP1R9AQ9ULJ8 1098 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 USP17L15C9J2P7 530 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 USP17L13C9JLJ4 530 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 USP17L11C9JVI0 530 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 USP17L18D6R9N7 530 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 USP17L22D6RA61 530 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 USP17L17D6RBQ6 530 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 USP17L19D6RCP7 530 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 USP17L20D6RJB6 530 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 ZBTB5O15062 677 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 USP17L24Q0WX57 530 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 WWC2Q6AWC2 1192 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 TYW1BQ6NUM6 668 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 PRPF38AQ8NAV1 312 aaKnown RBP24.86■■□□□ 1.57
TPM1-204ENST00000334895 WASF1Q92558 559 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 RANBP17Q9H2T7 1088 aaKnown RBP24.86■■□□□ 1.57
TPM1-204ENST00000334895 AGTPBP1Q9UPW5 1226 aa24.86■■□□□ 1.57
TPM1-204ENST00000334895 WDR33Q9C0J8 1336 aaKnown RBP24.85■■□□□ 1.57
TPM1-204ENST00000334895 PNMA6FA0A0J9YX94 578 aa24.85■■□□□ 1.57
TPM1-204ENST00000334895 FAM155AB1AL88 458 aaPredicted RBP24.85■■□□□ 1.57
TPM1-204ENST00000334895 STX6O43752 255 aa24.85■■□□□ 1.57
TPM1-204ENST00000334895 SLC10A3P09131 477 aa24.85■■□□□ 1.57
TPM1-204ENST00000334895 PDCP20941 246 aa24.85■■□□□ 1.57
TPM1-204ENST00000334895 GTF2A2P52657 109 aa24.85■■□□□ 1.57
TPM1-204ENST00000334895 SAMD1Q6SPF0 538 aaPredicted RBP24.85■■□□□ 1.57
TPM1-204ENST00000334895 FASTKD5Q7L8L6 764 aaKnown RBP24.85■■□□□ 1.57
TPM1-204ENST00000334895 C8orf76Q96K31 380 aa24.85■■□□□ 1.57
TPM1-204ENST00000334895 VPS54Q9P1Q0 977 aa24.85■■□□□ 1.57
TPM1-204ENST00000334895 SEC63Q9UGP8 760 aaKnown RBP24.85■■□□□ 1.57
TPM1-204ENST00000334895 CIZ1Q9ULV3 898 aaPredicted RBP24.85■■□□□ 1.57
TPM1-204ENST00000334895 ZDHHC9Q9Y397 364 aa24.85■■□□□ 1.57
TPM1-204ENST00000334895 HOXA7P31268 230 aaPredicted RBP24.84■■□□□ 1.57
TPM1-204ENST00000334895 GUCY1B3Q02153 619 aa24.84■■□□□ 1.57
TPM1-204ENST00000334895 FBXO18Q8NFZ0 1043 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms