RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 PANX2Q96RD6 677 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 LY75O60449 1722 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 SOWAHDA6NJG2 315 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 RPN1P04843 607 aaKnown RBP20.02■□□□□ 0.8
LRCH3-201ENST00000334859 ZNF287Q9HBT7 754 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 TCP11L1Q9NUJ3 509 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 BARHL2Q9NY43 387 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 DDX41Q9UJV9 622 aaKnown RBP20.02■□□□□ 0.8
LRCH3-201ENST00000334859 PCDHA6Q9UN73 950 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 PCDHA8Q9Y5H6 950 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 PARP3Q9Y6F1 533 aa20.02■□□□□ 0.8
LRCH3-201ENST00000334859 STXBP3O00186 592 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 IGSF3O75054 1194 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 CREBRFQ8IUR6 639 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 TEX11Q8IYF3 940 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 NELFBQ8WX92 580 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 WDR24Q96S15 920 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 CPVLQ9H3G5 476 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 DISC1Q9NRI5 854 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 RWDD2AQ9UIY3 292 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 MAPK8IP1Q9UQF2 711 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 PP2D1A8MPX8 630 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 CASQ1P31415 396 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 PBX1P40424 430 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 KRT31Q15323 416 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 ZNF658Q5TYW1 1059 aaPredicted RBP20.01■□□□□ 0.79
LRCH3-201ENST00000334859 EYA3Q99504 573 aa20.01■□□□□ 0.79
LRCH3-201ENST00000334859 KLRF2D3W0D1 207 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 UBAP1LF5GYI3 381 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 M0R2N6 131 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 N4BP3O15049 544 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 CCDC175P0C221 793 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 ARHGAP29Q52LW3 1261 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 SRRTQ9BXP5 876 aaKnown RBP20■□□□□ 0.79
LRCH3-201ENST00000334859 TMEM60Q9H2L4 133 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 CD209Q9NNX6 404 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 GDAQ9Y2T3 454 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 SNED1Q8TER0 1413 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20■□□□□ 0.79
LRCH3-201ENST00000334859 PALM3A6NDB9 673 aaPredicted RBP20■□□□□ 0.79
LRCH3-201ENST00000334859 MFAP3LO75121 409 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 TPM1P09493 284 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 GALNT17Q6IS24 598 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 DAGLBQ8NCG7 672 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 ANKRD20A12PQ8NF67 263 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 GGA1Q9UJY5 639 aa20■□□□□ 0.79
LRCH3-201ENST00000334859 CASP14P31944 242 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 UBA7P41226 1012 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 CDK8P49336 464 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 NAPAP54920 295 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 UBXN4Q92575 508 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 CARD6Q9BX69 1037 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 MRPL44Q9H9J2 332 aaKnown RBP19.99■□□□□ 0.79
LRCH3-201ENST00000334859 CDK5RAP2Q96SN8 1893 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 SPAG1Q07617 926 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 C15orf52Q6ZUT6 534 aaKnown RBP19.99■□□□□ 0.79
LRCH3-201ENST00000334859 CERS3Q8IU89 383 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 CNGA4Q8IV77 575 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 PLIN2Q99541 437 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 LZTS2Q9BRK4 669 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 NAA15Q9BXJ9 866 aaKnown RBP19.99■□□□□ 0.79
LRCH3-201ENST00000334859 VPS16Q9H269 839 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 TAB2Q9NYJ8 693 aa19.99■□□□□ 0.79
LRCH3-201ENST00000334859 FLT1P17948 1338 aa19.98■□□□□ 0.79
LRCH3-201ENST00000334859 GYPCP04921 128 aa19.98■□□□□ 0.79
LRCH3-201ENST00000334859 ST5P78524 1137 aa19.98■□□□□ 0.79
LRCH3-201ENST00000334859 MFSD14BQ5SR56 506 aa19.98■□□□□ 0.79
LRCH3-201ENST00000334859 DDX60LQ5H9U9 1706 aaKnown RBP19.97■□□□□ 0.79
LRCH3-201ENST00000334859 KCNJ18B7U540 433 aa19.97■□□□□ 0.79
LRCH3-201ENST00000334859 PARP1P09874 1014 aaKnown RBP19.97■□□□□ 0.79
LRCH3-201ENST00000334859 ZSCAN20P17040 1043 aaPredicted RBP19.97■□□□□ 0.79
LRCH3-201ENST00000334859 KCNJ12Q14500 433 aa19.97■□□□□ 0.79
LRCH3-201ENST00000334859 RAD9BQ6WBX8 426 aa19.97■□□□□ 0.79
LRCH3-201ENST00000334859 C16orf86Q6ZW13 317 aa19.97■□□□□ 0.79
LRCH3-201ENST00000334859 LZTFL1Q9NQ48 299 aa19.97■□□□□ 0.79
LRCH3-201ENST00000334859 LIMA1Q9UHB6 759 aaKnown RBP19.97■□□□□ 0.79
LRCH3-201ENST00000334859 PLCG2P16885 1265 aa19.97■□□□□ 0.79
LRCH3-201ENST00000334859 PRCPP42785 496 aa19.97■□□□□ 0.79
LRCH3-201ENST00000334859 FXR1P51114 621 aaKnown RBP eCLIP19.97■□□□□ 0.79
LRCH3-201ENST00000334859 COPB1P53618 953 aaKnown RBP19.97■□□□□ 0.79
LRCH3-201ENST00000334859 NAALADL2Q58DX5 795 aa19.97■□□□□ 0.79
LRCH3-201ENST00000334859 TCP11X2Q5H9J9 407 aa19.97■□□□□ 0.79
LRCH3-201ENST00000334859 SPZ1Q9BXG8 430 aa19.97■□□□□ 0.79
LRCH3-201ENST00000334859 LRRC4BQ9NT99 713 aa19.97■□□□□ 0.79
LRCH3-201ENST00000334859 EP400Q96L91 3159 aa19.96■□□□□ 0.79
LRCH3-201ENST00000334859 ITIH6Q6UXX5 1313 aa19.96■□□□□ 0.79
LRCH3-201ENST00000334859 GPR75-ASB3A0A0A6YYF3 556 aa19.96■□□□□ 0.79
LRCH3-201ENST00000334859 TADA3O75528 432 aa19.96■□□□□ 0.79
LRCH3-201ENST00000334859 H2AFXP16104 143 aaPredicted RBP19.96■□□□□ 0.79
LRCH3-201ENST00000334859 ATP2B4P23634 1241 aa19.96■□□□□ 0.79
LRCH3-201ENST00000334859 USP17L2Q6R6M4 530 aa19.96■□□□□ 0.79
LRCH3-201ENST00000334859 CCDC12Q8WUD4 166 aaPredicted RBP19.96■□□□□ 0.79
LRCH3-201ENST00000334859 SEC63Q9UGP8 760 aaKnown RBP19.96■□□□□ 0.79
LRCH3-201ENST00000334859 ADGRG1Q9Y653 693 aa19.96■□□□□ 0.79
LRCH3-201ENST00000334859 LAD1O00515 517 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 IL1R1P14778 569 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 ADRA2BP18089 450 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 LETM2Q2VYF4 491 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 CRY2Q49AN0 593 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 KIFC2Q96AC6 838 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms