RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 GNGT1P63211 74 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 GRIPAP1Q4V328 841 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 MEX3CQ5U5Q3 659 aaKnown RBP15.39■□□□□ 0.05
SYNE3-201ENST00000334258 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.39■□□□□ 0.05
SYNE3-201ENST00000334258 PSMD14O00487 310 aa15.38■□□□□ 0.05
SYNE3-201ENST00000334258 PHKA1P46020 1223 aa15.38■□□□□ 0.05
SYNE3-201ENST00000334258 KRT83P78385 493 aa15.38■□□□□ 0.05
SYNE3-201ENST00000334258 C2orf54Q08AI8 447 aa15.38■□□□□ 0.05
SYNE3-201ENST00000334258 EEF2KMTQ96G04 330 aa15.38■□□□□ 0.05
SYNE3-201ENST00000334258 GREM2Q9H772 168 aa15.38■□□□□ 0.05
SYNE3-201ENST00000334258 SAMM50Q9Y512 469 aa15.38■□□□□ 0.05
SYNE3-201ENST00000334258 KRT2P35908 639 aa15.38■□□□□ 0.05
SYNE3-201ENST00000334258 MCTP2Q6DN12 878 aa15.38■□□□□ 0.05
SYNE3-201ENST00000334258 CCNI2Q6ZMN8 369 aaPredicted RBP15.38■□□□□ 0.05
SYNE3-201ENST00000334258 ZNF654Q8IZM8 581 aa15.38■□□□□ 0.05
SYNE3-201ENST00000334258 EHBP1Q8NDI1 1231 aa15.38■□□□□ 0.05
SYNE3-201ENST00000334258 NACAP1Q9BZK3 213 aa15.38■□□□□ 0.05
SYNE3-201ENST00000334258 PRKAB2O43741 272 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 EARS2Q5JPH6 523 aaKnown RBP15.37■□□□□ 0.05
SYNE3-201ENST00000334258 FBXW10Q5XX13 1052 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 IQCEQ6IPM2 695 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 FERMT2Q96AC1 680 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 RPGRIP1Q96KN7 1286 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 RWDD2AQ9UIY3 292 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 LOC102724428A0A0B4J2F2 783 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 MINDY4BA8MYZ0 360 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 TRIM21P19474 475 aaKnown RBP15.37■□□□□ 0.05
SYNE3-201ENST00000334258 FECHP22830 423 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 INPP5BP32019 993 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 CRKLP46109 303 aaKnown RBP15.37■□□□□ 0.05
SYNE3-201ENST00000334258 SIK1P57059 783 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 PTGDRQ13258 359 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 ANKRD18AQ8IVF6 992 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 RNF217Q8TC41 542 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 EPB41L4AQ9HCS5 686 aaPredicted RBP15.37■□□□□ 0.05
SYNE3-201ENST00000334258 GDAQ9Y2T3 454 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 V9GY48 417 aaPredicted RBP15.37■□□□□ 0.05
SYNE3-201ENST00000334258 SIPA1L3O60292 1781 aaPredicted RBP15.37■□□□□ 0.05
SYNE3-201ENST00000334258 ITGA6P23229 1130 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 SH3RF1Q7Z6J0 888 aa15.37■□□□□ 0.05
SYNE3-201ENST00000334258 MAGEC2Q9UBF1 373 aaPredicted RBP15.37■□□□□ 0.05
SYNE3-201ENST00000334258 TARSL2A2RTX5 802 aaKnown RBP15.36■□□□□ 0.05
SYNE3-201ENST00000334258 CYP27A1Q02318 531 aa15.36■□□□□ 0.05
SYNE3-201ENST00000334258 MAP3K12Q12852 859 aa15.36■□□□□ 0.05
SYNE3-201ENST00000334258 PPFIA1Q13136 1202 aa15.36■□□□□ 0.05
SYNE3-201ENST00000334258 CCDC91Q7Z6B0 441 aa15.36■□□□□ 0.05
SYNE3-201ENST00000334258 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
SYNE3-201ENST00000334258 AFDNP55196 1824 aaKnown RBP15.36■□□□□ 0.05
SYNE3-201ENST00000334258 LRRC10BA6NIK2 292 aa15.36■□□□□ 0.05
SYNE3-201ENST00000334258 WTIPA6NIX2 430 aaPredicted RBP15.36■□□□□ 0.05
SYNE3-201ENST00000334258 PARP1P09874 1014 aaKnown RBP15.36■□□□□ 0.05
SYNE3-201ENST00000334258 CYLC1P35663 651 aaPredicted RBP15.36■□□□□ 0.05
SYNE3-201ENST00000334258 TMTC2Q8N394 836 aa15.36■□□□□ 0.05
SYNE3-201ENST00000334258 PSMB7Q99436 277 aa15.36■□□□□ 0.05
SYNE3-201ENST00000334258 SLC4A4Q9Y6R1 1079 aa15.36■□□□□ 0.05
SYNE3-201ENST00000334258 TRIM49BA6NDI0 452 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 AGPSO00116 658 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 HERVK_113P62684 666 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 TTC38Q5R3I4 469 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 LACRTQ9GZZ8 138 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 USP21Q9UK80 565 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 NWD2Q9ULI1 1742 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 DUSP10Q9Y6W6 482 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 XDHP47989 1333 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 PDE2AO00408 941 aaPredicted RBP15.35■□□□□ 0.05
SYNE3-201ENST00000334258 NDUFAB1O14561 156 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 ZEB2O60315 1214 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 KIAA0754O94854 1291 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 SATB1Q01826 763 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 PAPD7Q5XG87 772 aaKnown RBP15.35■□□□□ 0.05
SYNE3-201ENST00000334258 TRIM47Q96LD4 638 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 FAM184BQ9ULE4 1060 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 IQSEC3Q9UPP2 1182 aaPredicted RBP15.35■□□□□ 0.05
SYNE3-201ENST00000334258 WNT7AO00755 349 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 IRS4O14654 1257 aaPredicted RBP15.35■□□□□ 0.05
SYNE3-201ENST00000334258 BMP15O95972 392 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 MCM7P33993 719 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 USP8P40818 1118 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 KIF5AQ12840 1032 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 MB21D1Q8N884 522 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 MIGA1Q8NAN2 632 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 CXorf56Q9H5V9 222 aa15.35■□□□□ 0.05
SYNE3-201ENST00000334258 ANKRD18BA2A2Z9 1011 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 CPP00450 1065 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 PRCPP42785 496 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 SETQ01105 290 aaPredicted RBP15.34■□□□□ 0.05
SYNE3-201ENST00000334258 SLC7A5Q01650 507 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 CCDC96Q2M329 555 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 NLRP10Q86W26 655 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 KAT2BQ92831 832 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 SUFUQ9UMX1 484 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 TACC3Q9Y6A5 838 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 KCPQ6ZWJ8 1503 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 PPARAQ07869 468 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 CCDC181Q5TID7 509 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 SUGP1Q8IWZ8 645 aaKnown RBP15.34■□□□□ 0.05
SYNE3-201ENST00000334258 TTLL11Q8NHH1 800 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 RIPOR2Q9Y4F9 1068 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 OPA1O60313 960 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 RRP36Q96EU6 259 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms