RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 HELLSQ9NRZ9 838 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 MAD1L1Q9Y6D9 718 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 BLMP54132 1417 aaPredicted RBP11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 FAM135BQ49AJ0 1406 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 SPAG7O75391 227 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 NSMCE1Q8WV22 266 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 CFAP36Q96G28 342 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 ASIC2Q16515 512 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 RTN1Q16799 776 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 TMEM259Q4ZIN3 620 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 WAPLQ7Z5K2 1190 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 ZGPATQ8N5A5 531 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 TERB1Q8NA31 727 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 ATP6V1E2Q96A05 226 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 GUCY2FP51841 1108 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 DNAJC17Q9NVM6 304 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 BZW2Q9Y6E2 419 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 TARSL2A2RTX5 802 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 TNFAIP3P21580 790 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 CABP5Q9NP86 173 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 ZNF202O95125 648 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 BAG3O95817 575 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 PDE1AP54750 535 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 USP33Q8TEY7 942 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 XPO4Q9C0E2 1151 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 TMEM60Q9H2L4 133 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 GID8Q9NWU2 228 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 USTQ9Y2C2 406 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 C9orf84Q5VXU9 1444 aa11.28□□□□□ -0.6
SPTBN1-201ENST00000333896 TADA3O75528 432 aa11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 MFN1Q8IWA4 741 aa11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 MYD88Q99836 296 aa11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 PIK3C2GO75747 1445 aa11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 NAPAP54920 295 aa11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 PEX26Q7Z412 305 aa11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 ICA1LQ8NDH6 482 aa11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 BRF1Q92994 677 aa11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 MEFVO15553 781 aaPredicted RBP11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 ZBTB43O43298 467 aa11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 BRD1O95696 1058 aa11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 NOP9Q86U38 636 aaKnown RBP11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 KLHL23Q8NBE8 558 aa11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 NOC4LQ9BVI4 516 aaKnown RBP11.27□□□□□ -0.6
SPTBN1-201ENST00000333896 SPDYE3A6NKU9 549 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 CUTAO60888 179 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 AK2P54819 239 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 MRPS15P82914 257 aaKnown RBP11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 MYO1EQ12965 1108 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 NACA2Q9H009 215 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 SPC25Q9HBM1 224 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 PYGLP06737 847 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 ADCY2Q08462 1091 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 RGL1Q9NZL6 768 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 RCN2Q14257 317 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 CACTINQ8WUQ7 758 aaKnown RBP11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 GNA14O95837 355 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 NR1H3Q13133 447 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 TRIML2Q8N7C3 387 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 PDXDC1Q6P996 788 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 ARHGAP22Q7Z5H3 698 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 RSAD2Q8WXG1 361 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 FNBP1Q96RU3 617 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 PARD6BQ9BYG5 372 aa11.27□□□□□ -0.61
SPTBN1-201ENST00000333896 PLIN2Q99541 437 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 LRRC2Q9BYS8 371 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 SLC4A7Q9Y6M7 1214 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 H0YC42 278 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 KRT7P08729 469 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 HSPA9P38646 679 aaKnown RBP11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 TRMT10CQ7L0Y3 403 aaKnown RBP11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 OR8K1Q8NGG5 319 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 MPP4Q96JB8 637 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 KIAA1468Q9P260 1216 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 KLF18A0A0U1RQI7 1052 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 MKRN3Q13064 507 aaKnown RBP11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 PAK1Q13153 545 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 MTX1Q13505 466 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 C10orf76Q5T2E6 689 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 TRIM15Q9C019 465 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 RGS12O14924 1447 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 EIF2S1P05198 315 aaKnown RBP11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 NNTQ13423 1086 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 SKA2Q8WVK7 121 aaPredicted RBP11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 DKK3Q9UBP4 350 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 RTL9Q8NET4 1388 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 KCNJ6P48051 423 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 CCDC85BQ15834 202 aaPredicted RBP11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 HDAC11Q96DB2 347 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 ARHGAP5Q13017 1502 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 SPDYE16A6NNV3 312 aaPredicted RBP11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 GNAT3A8MTJ3 354 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 KRT8P05787 483 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 SAT1P21673 171 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 SPDYE2Q495Y8 402 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 SESTD1Q86VW0 696 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 IFT122Q9HBG6 1241 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 DEAF1O75398 565 aaPredicted RBP11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 ACRBPQ8NEB7 543 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 GPT2Q8TD30 523 aa11.26□□□□□ -0.61
SPTBN1-201ENST00000333896 SH3GL2Q99962 352 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms