RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 GPCPD1Q9NPB8 672 aa18.73■□□□□ 0.59
LRRC28-202ENST00000331450 HOXC10Q9NYD6 342 aa18.73■□□□□ 0.59
LRRC28-202ENST00000331450 MORF4L1Q9UBU8 362 aa18.73■□□□□ 0.59
LRRC28-202ENST00000331450 PLXNB2O15031 1838 aa18.72■□□□□ 0.59
LRRC28-202ENST00000331450 CNMDO75829 334 aa18.72■□□□□ 0.59
LRRC28-202ENST00000331450 RXRAP19793 462 aa18.72■□□□□ 0.59
LRRC28-202ENST00000331450 RABEP1Q15276 862 aa18.72■□□□□ 0.59
LRRC28-202ENST00000331450 MICU3Q86XE3 530 aa18.72■□□□□ 0.59
LRRC28-202ENST00000331450 REPS2Q8NFH8 660 aa18.72■□□□□ 0.59
LRRC28-202ENST00000331450 CHURC1Q8WUH1 139 aa18.72■□□□□ 0.59
LRRC28-202ENST00000331450 TXNRD2Q9NNW7 524 aa18.72■□□□□ 0.59
LRRC28-202ENST00000331450 RBPJLQ9UBG7 517 aa18.72■□□□□ 0.59
LRRC28-202ENST00000331450 PRR12Q9ULL5 1215 aa18.72■□□□□ 0.59
LRRC28-202ENST00000331450 HPS5Q9UPZ3 1129 aa18.72■□□□□ 0.59
LRRC28-202ENST00000331450 VWA5AO00534 786 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 ZBTB43O43298 467 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 HSPA1AP0DMV8 641 aaKnown RBP18.71■□□□□ 0.59
LRRC28-202ENST00000331450 HSPA1BP0DMV9 641 aaKnown RBP18.71■□□□□ 0.59
LRRC28-202ENST00000331450 SLC16A2P36021 539 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 FAM110CQ1W6H9 321 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 SLC35G1Q2M3R5 365 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 RAB11FIP4Q86YS3 637 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 MB21D1Q8N884 522 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 CTCFLQ8NI51 663 aaPredicted RBP18.71■□□□□ 0.59
LRRC28-202ENST00000331450 NUP133Q8WUM0 1156 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 CPVLQ9H3G5 476 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 BTBD7Q9P203 1132 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 CPA4Q9UI42 421 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 ISY1Q9ULR0 285 aaKnown RBP18.71■□□□□ 0.59
LRRC28-202ENST00000331450 RABGAP1Q9Y3P9 1069 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 ZNF236Q9UL36 1845 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 PCNTO95613 3336 aa18.71■□□□□ 0.59
LRRC28-202ENST00000331450 SMCHD1A6NHR9 2005 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 GOLGA8BA8MQT2 603 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 KLRF2D3W0D1 207 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 FOXN1O15353 648 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 PEX10O60683 326 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 ANKRD1Q15327 319 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 SYDE2Q5VT97 1194 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 SYNE3Q6ZMZ3 975 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 FANCBQ8NB91 859 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 IL27Q8NEV9 243 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 KIFC2Q96AC6 838 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 SLC38A10Q9HBR0 1119 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 FAM217BQ9NTX9 383 aaPredicted RBP18.7■□□□□ 0.58
LRRC28-202ENST00000331450 TSKSQ9UJT2 592 aa18.7■□□□□ 0.58
LRRC28-202ENST00000331450 ZNF214Q9UL59 606 aaPredicted RBP18.7■□□□□ 0.58
LRRC28-202ENST00000331450 GPR25O00155 361 aa18.69■□□□□ 0.58
LRRC28-202ENST00000331450 FDX1P10109 184 aa18.69■□□□□ 0.58
LRRC28-202ENST00000331450 PDIA3P30101 505 aaKnown RBP18.69■□□□□ 0.58
LRRC28-202ENST00000331450 KIF5BP33176 963 aa18.69■□□□□ 0.58
LRRC28-202ENST00000331450 IKQ13123 557 aaPredicted RBP18.69■□□□□ 0.58
LRRC28-202ENST00000331450 CCDC144CPQ8IYA2 1237 aa18.69■□□□□ 0.58
LRRC28-202ENST00000331450 ANKRD13CQ8N6S4 541 aa18.69■□□□□ 0.58
LRRC28-202ENST00000331450 ZNF274Q96GC6 653 aaPredicted RBP18.69■□□□□ 0.58
LRRC28-202ENST00000331450 UBA5Q9GZZ9 404 aa18.69■□□□□ 0.58
LRRC28-202ENST00000331450 RANBP17Q9H2T7 1088 aaKnown RBP18.69■□□□□ 0.58
LRRC28-202ENST00000331450 TPCN1Q9ULQ1 816 aa18.69■□□□□ 0.58
LRRC28-202ENST00000331450 GOLGA8AA7E2F4 631 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 ATP2A1O14983 1001 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 CYTH3O43739 400 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 PLEKHA8P1O95397 391 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 HSPA8P11142 646 aaKnown RBP18.68■□□□□ 0.58
LRRC28-202ENST00000331450 ERVK-9P63128 1117 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 ERVK-24P63145 666 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 TMEM132BQ14DG7 1078 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 SAMD1Q6SPF0 538 aaPredicted RBP18.68■□□□□ 0.58
LRRC28-202ENST00000331450 NBPF11Q86T75 865 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 MTMR8Q96EF0 704 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 LARP6Q9BRS8 491 aaKnown RBP18.68■□□□□ 0.58
LRRC28-202ENST00000331450 PAGR1Q9BTK6 254 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 SPZ1Q9BXG8 430 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 RIOX1Q9H6W3 641 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 RBM28Q9NW13 759 aaKnown RBP18.68■□□□□ 0.58
LRRC28-202ENST00000331450 ZNF536O15090 1300 aa18.68■□□□□ 0.58
LRRC28-202ENST00000331450 SMARCA1P28370 1054 aa18.67■□□□□ 0.58
LRRC28-202ENST00000331450 CDC27P30260 824 aa18.67■□□□□ 0.58
LRRC28-202ENST00000331450 METAP2P50579 478 aaKnown RBP eCLIP18.67■□□□□ 0.58
LRRC28-202ENST00000331450 OAZ1P54368 228 aa18.67■□□□□ 0.58
LRRC28-202ENST00000331450 PPP2R5BQ15173 497 aa18.67■□□□□ 0.58
LRRC28-202ENST00000331450 RTN1Q16799 776 aa18.67■□□□□ 0.58
LRRC28-202ENST00000331450 TMTC3Q6ZXV5 915 aa18.67■□□□□ 0.58
LRRC28-202ENST00000331450 ADGRF4Q8IZF3 695 aa18.67■□□□□ 0.58
LRRC28-202ENST00000331450 LZTS2Q9BRK4 669 aa18.67■□□□□ 0.58
LRRC28-202ENST00000331450 JMJD4Q9H9V9 463 aa18.67■□□□□ 0.58
LRRC28-202ENST00000331450 BAZ2BQ9UIF8 2168 aaKnown RBP18.66■□□□□ 0.58
LRRC28-202ENST00000331450 CASP8AP2Q9UKL3 1982 aa18.66■□□□□ 0.58
LRRC28-202ENST00000331450 GNAQP50148 359 aa18.66■□□□□ 0.58
LRRC28-202ENST00000331450 FUT2Q10981 343 aa18.66■□□□□ 0.58
LRRC28-202ENST00000331450 Q3C1V9 767 aa18.66■□□□□ 0.58
LRRC28-202ENST00000331450 SRBD1Q8N5C6 995 aaKnown RBP18.66■□□□□ 0.58
LRRC28-202ENST00000331450 GPRC5AQ8NFJ5 357 aa18.66■□□□□ 0.58
LRRC28-202ENST00000331450 SPATC1LQ9H0A9 340 aa18.66■□□□□ 0.58
LRRC28-202ENST00000331450 NAP1L2Q9ULW6 460 aaPredicted RBP18.66■□□□□ 0.58
LRRC28-202ENST00000331450 CNTNAP5Q8WYK1 1306 aa18.66■□□□□ 0.58
LRRC28-202ENST00000331450 LCTP09848 1927 aa18.65■□□□□ 0.58
LRRC28-202ENST00000331450 ZNFX1Q9P2E3 1918 aaKnown RBP18.65■□□□□ 0.58
LRRC28-202ENST00000331450 ZBED4O75132 1171 aa18.65■□□□□ 0.58
LRRC28-202ENST00000331450 LARGE1O95461 756 aa18.65■□□□□ 0.58
LRRC28-202ENST00000331450 SNAP25P60880 206 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms