RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 LRP2BPQ9P2M1 347 aa7.71□□□□□ -1.17
SMG1-201ENST00000330588 HERC5Q9UII4 1024 aaKnown RBP7.71□□□□□ -1.17
SMG1-201ENST00000330588 SLC45A1Q9Y2W3 748 aa7.71□□□□□ -1.17
SMG1-201ENST00000330588 NDUFB9Q9Y6M9 179 aa7.71□□□□□ -1.17
SMG1-201ENST00000330588 PHF20L1A8MW92 1017 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 GNRH1P01148 92 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 CYP2E1P05181 493 aaPredicted RBP7.71□□□□□ -1.18
SMG1-201ENST00000330588 AAMPQ13685 434 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 ARHGEF6Q15052 776 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 NAA16Q6N069 864 aaPredicted RBP7.71□□□□□ -1.18
SMG1-201ENST00000330588 PI16Q6UXB8 463 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 ANKRD23Q86SG2 305 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 SCYL3Q8IZE3 742 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 TMEM151AQ8N4L1 468 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 KCTD17Q8N5Z5 321 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 ZNF296Q8WUU4 475 aaPredicted RBP7.71□□□□□ -1.18
SMG1-201ENST00000330588 ERO1AQ96HE7 468 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 CDK5RAP2Q96SN8 1893 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 RAI14Q9P0K7 980 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 FZD1Q9UP38 647 aa7.71□□□□□ -1.18
SMG1-201ENST00000330588 CCL15-CCL14A0A0B4J2E2 113 aa7.7□□□□□ -1.18
SMG1-201ENST00000330588 RNF225M0QZC1 329 aaPredicted RBP7.7□□□□□ -1.18
SMG1-201ENST00000330588 APBB1O00213 710 aa7.7□□□□□ -1.18
SMG1-201ENST00000330588 TBC1D8O95759 1140 aa7.7□□□□□ -1.18
SMG1-201ENST00000330588 ABL2P42684 1182 aa7.7□□□□□ -1.18
SMG1-201ENST00000330588 RNF144AP50876 292 aaPredicted RBP7.7□□□□□ -1.18
SMG1-201ENST00000330588 TCP10Q12799 353 aa7.7□□□□□ -1.18
SMG1-201ENST00000330588 CCL15Q16663 113 aa7.7□□□□□ -1.18
SMG1-201ENST00000330588 FBXO46Q6PJ61 603 aaPredicted RBP7.7□□□□□ -1.18
SMG1-201ENST00000330588 SIRT2Q8IXJ6 389 aa7.7□□□□□ -1.18
SMG1-201ENST00000330588 BRI3BPQ8WY22 251 aa7.7□□□□□ -1.18
SMG1-201ENST00000330588 PTPN18Q99952 460 aa7.7□□□□□ -1.18
SMG1-201ENST00000330588 ZFYVE28Q9HCC9 887 aa7.7□□□□□ -1.18
SMG1-201ENST00000330588 DDX4Q9NQI0 724 aaKnown RBP7.7□□□□□ -1.18
SMG1-201ENST00000330588 PHIPQ8WWQ0 1821 aa7.7□□□□□ -1.18
SMG1-201ENST00000330588 DDX60LQ5H9U9 1706 aaKnown RBP7.69□□□□□ -1.18
SMG1-201ENST00000330588 AK9Q5TCS8 1911 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 CDC14CA4D256 554 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 TLR2O60603 784 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 INPP5BP32019 993 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 ZAP70P43403 619 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 RAB15P59190 212 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 MAP3K12Q12852 859 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 CRHR2Q13324 411 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 TBC1D9Q6ZT07 1266 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 FASTKD5Q7L8L6 764 aaKnown RBP7.69□□□□□ -1.18
SMG1-201ENST00000330588 AACSQ86V21 672 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 ZKSCAN4Q969J2 545 aaPredicted RBP7.69□□□□□ -1.18
SMG1-201ENST00000330588 CUEDC1Q9NWM3 386 aaPredicted RBP7.69□□□□□ -1.18
SMG1-201ENST00000330588 PI4KBQ9UBF8 816 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 EXOC6BQ9Y2D4 811 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 PTPRFP10586 1907 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 LOC285556D6RIA3 1793 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 RBBP6Q7Z6E9 1792 aaKnown RBP7.69□□□□□ -1.18
SMG1-201ENST00000330588 SIPA1L1O43166 1804 aa7.69□□□□□ -1.18
SMG1-201ENST00000330588 A0A0G2JLL6 359 aaPredicted RBP7.68□□□□□ -1.18
SMG1-201ENST00000330588 DDTLA6NHG4 134 aaPredicted RBP7.68□□□□□ -1.18
SMG1-201ENST00000330588 GDF11O95390 407 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 IFIT2P09913 472 aaKnown RBP7.68□□□□□ -1.18
SMG1-201ENST00000330588 PTPRAP18433 802 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 PRMT2P55345 433 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 SP3Q02447 781 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 TAF1CQ15572 869 aaPredicted RBP7.68□□□□□ -1.18
SMG1-201ENST00000330588 MIGA2Q7L4E1 593 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 LYSMD3Q7Z3D4 306 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 PRRT2Q7Z6L0 340 aaPredicted RBP7.68□□□□□ -1.18
SMG1-201ENST00000330588 FOXP4Q8IVH2 680 aaPredicted RBP7.68□□□□□ -1.18
SMG1-201ENST00000330588 ZSCAN29Q8IWY8 852 aaPredicted RBP7.68□□□□□ -1.18
SMG1-201ENST00000330588 ZFPM1Q8IX07 1006 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 TEX11Q8IYF3 940 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 SVOPQ8N4V2 548 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 EHD4Q9H223 541 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 PICK1Q9NRD5 415 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 TLR7Q9NYK1 1049 aaKnown RBP7.68□□□□□ -1.18
SMG1-201ENST00000330588 ADGRA2Q96PE1 1338 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 ATAD5Q96QE3 1844 aa7.68□□□□□ -1.18
SMG1-201ENST00000330588 MYO5AQ9Y4I1 1855 aaKnown RBP7.68□□□□□ -1.18
SMG1-201ENST00000330588 BTBD19C9JJ37 291 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 ATP5JP18859 108 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 MOGSQ13724 837 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 GAS6Q14393 721 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 OTOP1Q7RTM1 612 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 FAM43AQ8N2R8 423 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 LRRCC1Q9C099 1032 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 CCDC8Q9H0W5 538 aaPredicted RBP7.67□□□□□ -1.18
SMG1-201ENST00000330588 PIH1D3Q9NQM4 214 aaKnown RBP7.67□□□□□ -1.18
SMG1-201ENST00000330588 AFG3L2Q9Y4W6 797 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 FLT1P17948 1338 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 POM121CA8CG34 1229 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 ZBBXA8MT70 800 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 HLA-DOAP06340 250 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 CYP7A1P22680 504 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 CAP2P40123 477 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 PICALMQ13492 652 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 SUZ12Q15022 739 aaKnown RBP7.67□□□□□ -1.18
SMG1-201ENST00000330588 SH3RF3Q8TEJ3 882 aaPredicted RBP7.67□□□□□ -1.18
SMG1-201ENST00000330588 PARK7Q99497 189 aaKnown RBP7.67□□□□□ -1.18
SMG1-201ENST00000330588 WDR18Q9BV38 432 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 R3HDMLQ9H3Y0 253 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 DCTPP1Q9H773 170 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms