RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 FLOT1O75955 427 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 PDCP20941 246 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 NOVP48745 357 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 FLT3LGP49771 235 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 MFSD6Q6ZSS7 791 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 SH2D4AQ9H788 454 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 GOPCQ9HD26 462 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 TPCN1Q9ULQ1 816 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 RABGAP1Q9Y3P9 1069 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 MYPNQ86TC9 1320 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 TNPO2O14787 897 aaKnown RBP19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 WDR46O15213 610 aaKnown RBP19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 MYCP01106 439 aaPredicted RBP19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 SOX10P56693 466 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 ME3Q16798 604 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 RCSD1Q6JBY9 416 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 TMTC2Q8N394 836 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 HOXC10Q9NYD6 342 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 KIF3AQ9Y496 699 aa19.16■□□□□ 0.66
PDLIM1-201ENST00000329399 DHX16O60231 1041 aaKnown RBP19.15■□□□□ 0.66
PDLIM1-201ENST00000329399 GNRH1P01148 92 aa19.15■□□□□ 0.66
PDLIM1-201ENST00000329399 ARHGEF6Q15052 776 aa19.15■□□□□ 0.66
PDLIM1-201ENST00000329399 NOL8Q76FK4 1167 aaKnown RBP19.15■□□□□ 0.66
PDLIM1-201ENST00000329399 ZKSCAN3Q9BRR0 538 aa19.15■□□□□ 0.66
PDLIM1-201ENST00000329399 FOXD4L1Q9NU39 408 aa19.15■□□□□ 0.66
PDLIM1-201ENST00000329399 ADAMTS5Q9UNA0 930 aa19.15■□□□□ 0.66
PDLIM1-201ENST00000329399 STX8Q9UNK0 236 aa19.15■□□□□ 0.66
PDLIM1-201ENST00000329399 MYH4Q9Y623 1939 aa19.14■□□□□ 0.65
PDLIM1-201ENST00000329399 DDX11L8A8MPP1 907 aa19.14■□□□□ 0.65
PDLIM1-201ENST00000329399 TNRC18O15417 2968 aaPredicted RBP19.14■□□□□ 0.65
PDLIM1-201ENST00000329399 PRC1O43663 620 aa19.14■□□□□ 0.65
PDLIM1-201ENST00000329399 PFKFB2O60825 505 aa19.14■□□□□ 0.65
PDLIM1-201ENST00000329399 ELNP15502 786 aa19.14■□□□□ 0.65
PDLIM1-201ENST00000329399 COL9A3Q14050 684 aaPredicted RBP19.14■□□□□ 0.65
PDLIM1-201ENST00000329399 SART3Q15020 963 aaKnown RBP19.14■□□□□ 0.65
PDLIM1-201ENST00000329399 BRF1Q92994 677 aa19.14■□□□□ 0.65
PDLIM1-201ENST00000329399 ARMC5Q96C12 935 aa19.14■□□□□ 0.65
PDLIM1-201ENST00000329399 B4E1Z4 1266 aa19.13■□□□□ 0.65
PDLIM1-201ENST00000329399 GOLGA6L22H0YM25 854 aa19.13■□□□□ 0.65
PDLIM1-201ENST00000329399 KDM4AO75164 1064 aa19.13■□□□□ 0.65
PDLIM1-201ENST00000329399 HOXD10P28358 340 aa19.13■□□□□ 0.65
PDLIM1-201ENST00000329399 TMEM132BQ14DG7 1078 aa19.13■□□□□ 0.65
PDLIM1-201ENST00000329399 SLFN13Q68D06 897 aa19.13■□□□□ 0.65
PDLIM1-201ENST00000329399 RGS22Q8NE09 1264 aa19.13■□□□□ 0.65
PDLIM1-201ENST00000329399 TNPO1Q92973 898 aaKnown RBP19.13■□□□□ 0.65
PDLIM1-201ENST00000329399 GTF3C6Q969F1 213 aa19.13■□□□□ 0.65
PDLIM1-201ENST00000329399 ZNF333Q96JL9 665 aa19.13■□□□□ 0.65
PDLIM1-201ENST00000329399 MOV10L1Q9BXT6 1211 aaKnown RBP19.13■□□□□ 0.65
PDLIM1-201ENST00000329399 LIFRP42702 1097 aa19.12■□□□□ 0.65
PDLIM1-201ENST00000329399 SLC9C1Q4G0N8 1177 aa19.12■□□□□ 0.65
PDLIM1-201ENST00000329399 GPR142Q7Z601 462 aa19.12■□□□□ 0.65
PDLIM1-201ENST00000329399 GMCL1P1Q8NEA9 526 aa19.12■□□□□ 0.65
PDLIM1-201ENST00000329399 REPS2Q8NFH8 660 aa19.12■□□□□ 0.65
PDLIM1-201ENST00000329399 RAET1EQ8TD07 263 aa19.12■□□□□ 0.65
PDLIM1-201ENST00000329399 TMEM47Q9BQJ4 181 aa19.12■□□□□ 0.65
PDLIM1-201ENST00000329399 TCP11L1Q9NUJ3 509 aa19.12■□□□□ 0.65
PDLIM1-201ENST00000329399 ZSWIM5Q9P217 1185 aa19.12■□□□□ 0.65
PDLIM1-201ENST00000329399 PPP1R9AQ9ULJ8 1098 aa19.12■□□□□ 0.65
PDLIM1-201ENST00000329399 MTMR7Q9Y216 660 aa19.12■□□□□ 0.65
PDLIM1-201ENST00000329399 PLXNB2O15031 1838 aa19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 POTEFA5A3E0 1075 aa19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 VWA5AO00534 786 aa19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 BRD1O95696 1058 aa19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 RCAN1P53805 252 aa19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 PRMT2P55345 433 aa19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 HMGN5P82970 282 aaKnown RBP19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 MTFR1Q15390 333 aa19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 CCDC83Q8IWF9 413 aa19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 GTF3C2Q8WUA4 911 aaPredicted RBP19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 USP6NLQ92738 828 aa19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 COA7Q96BR5 231 aa19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 ATP6V1DQ9Y5K8 247 aa19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 PARP14Q460N5 1801 aa19.11■□□□□ 0.65
PDLIM1-201ENST00000329399 ADCY3O60266 1144 aa19.1■□□□□ 0.65
PDLIM1-201ENST00000329399 GRK4P32298 578 aa19.1■□□□□ 0.65
PDLIM1-201ENST00000329399 MCM4P33991 863 aa19.1■□□□□ 0.65
PDLIM1-201ENST00000329399 TRIM32Q13049 653 aa19.1■□□□□ 0.65
PDLIM1-201ENST00000329399 MORN1Q5T089 497 aa19.1■□□□□ 0.65
PDLIM1-201ENST00000329399 KCTD1Q719H9 257 aa19.1■□□□□ 0.65
PDLIM1-201ENST00000329399 CYB5R4Q7L1T6 521 aa19.1■□□□□ 0.65
PDLIM1-201ENST00000329399 ESR2Q92731 530 aa19.1■□□□□ 0.65
PDLIM1-201ENST00000329399 SPATC1LQ9H0A9 340 aa19.1■□□□□ 0.65
PDLIM1-201ENST00000329399 ERICH2A1L162 156 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 PLS1Q14651 629 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 TTBK2Q6IQ55 1244 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 PLEKHH3Q7Z736 793 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 SGMS1Q86VZ5 419 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 SLF1Q9BQI6 1058 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 TMEM232C9JQI7 657 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 LARGE1O95461 756 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 BMP3P12645 472 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 ERCC3P19447 782 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 CYP2B6P20813 491 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 MAPK4P31152 587 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 SNAP25P60880 206 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 IRF5Q13568 498 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 PPP2R5BQ15173 497 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 CCL14Q16627 93 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 CCDC178Q5BJE1 867 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 WDR78Q5VTH9 848 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms