RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PLIN2Q99541 437 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 MIS12Q9H081 205 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 NSRP1Q9H0G5 558 aaKnown RBP12.68□□□□□ -0.38
COL4A5-201ENST00000328300 CCDC113Q9H0I3 377 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 DDX25Q9UHL0 483 aaKnown RBP12.68□□□□□ -0.38
COL4A5-201ENST00000328300 PCDHA12Q9UN75 941 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 PRAMEF22A3QJZ6 481 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 SASH1O94885 1247 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 PFKFB1P16118 471 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 PPP2R5AQ15172 486 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 PPP1R18Q6NYC8 613 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 ARMC9Q7Z3E5 817 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 MAATS1Q7Z4T9 603 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 PI4K2BQ8TCG2 481 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 CPDO75976 1380 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 EXOC3O60645 756 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 RAPGEF1Q13905 1077 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 PPP1R2P3Q6NXS1 205 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 UBL4BQ8N7F7 174 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 DCAF4Q8WV16 495 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 CSRNP1Q96S65 589 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 MRPL44Q9H9J2 332 aaKnown RBP12.68□□□□□ -0.38
COL4A5-201ENST00000328300 HAUS2Q9NVX0 235 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 KIAA1468Q9P260 1216 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 TMEM232C9JQI7 657 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 IGKV5-2P06315 115 aa12.68□□□□□ -0.38
COL4A5-201ENST00000328300 EEF2P13639 858 aaKnown RBP12.68□□□□□ -0.38
COL4A5-201ENST00000328300 SCNN1DP51172 638 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 CERKQ8TCT0 537 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 TLR7Q9NYK1 1049 aaKnown RBP12.67□□□□□ -0.38
COL4A5-201ENST00000328300 GTF2F1P35269 517 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL4A5-201ENST00000328300 SLC39A14Q15043 492 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 CCDC122Q5T0U0 273 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 STAG1Q8WVM7 1258 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 PIM2Q9P1W9 311 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 LARSQ9P2J5 1176 aaKnown RBP12.67□□□□□ -0.38
COL4A5-201ENST00000328300 STK17AQ9UEE5 414 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 SSX2IPQ9Y2D8 614 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 NFE2L3Q9Y4A8 694 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 STK36Q9NRP7 1315 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 KRBA2Q6ZNG9 492 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 DEPTORQ8TB45 409 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 TRERF1Q96PN7 1200 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 CBX8Q9HC52 389 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 PHLPP2Q6ZVD8 1323 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 ARFGAP2Q8N6H7 521 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 FAM212AQ96EL1 285 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 GSDMAQ96QA5 445 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 ALDH8A1Q9H2A2 487 aaPredicted RBP12.67□□□□□ -0.38
COL4A5-201ENST00000328300 WWC3Q9ULE0 1092 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 PALD1Q9ULE6 856 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 PCDHA1Q9Y5I3 950 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.67□□□□□ -0.38
COL4A5-201ENST00000328300 ATP6V0A1Q93050 837 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 CCDC94Q9BW85 323 aaPredicted RBP12.67□□□□□ -0.38
COL4A5-201ENST00000328300 PKD2L1Q9P0L9 805 aa12.67□□□□□ -0.38
COL4A5-201ENST00000328300 VAV2P52735 878 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 GABPB2Q8TAK5 448 aaPredicted RBP12.66□□□□□ -0.38
COL4A5-201ENST00000328300 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 SCRN1Q12765 414 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 RASGRF1Q13972 1273 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 TFDP1Q14186 410 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 TMEM179Q6ZVK1 233 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 PLA2G4DQ86XP0 818 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 MLXIPQ9HAP2 919 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 HOMER2Q9NSB8 354 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 SERTAD1Q9UHV2 236 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 ALAS1P13196 640 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 SP4Q02446 784 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 GPBP1Q86WP2 473 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 GCNT3O95395 438 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 BMP3P12645 472 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 KCTD2Q14681 263 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 RABL6Q3YEC7 729 aaPredicted RBP12.66□□□□□ -0.38
COL4A5-201ENST00000328300 PTGS1P23219 599 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 IREB2P48200 963 aaKnown RBP12.66□□□□□ -0.38
COL4A5-201ENST00000328300 CALCOCO2Q13137 446 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 SP8Q8IXZ3 490 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 GUCA1BQ9UMX6 200 aa12.66□□□□□ -0.38
COL4A5-201ENST00000328300 ADGRB1O14514 1584 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 FDX1P10109 184 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 ATF7P17544 494 aaPredicted RBP12.65□□□□□ -0.38
COL4A5-201ENST00000328300 ERCC5P28715 1186 aaPredicted RBP12.65□□□□□ -0.38
COL4A5-201ENST00000328300 AOC3Q16853 763 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 SPATA31A1Q5TZJ5 1347 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 LCORLQ8N3X6 602 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 NSUN7Q8NE18 718 aaKnown RBP12.65□□□□□ -0.38
COL4A5-201ENST00000328300 RPGRIP1Q96KN7 1286 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 NAPGQ99747 312 aaPredicted RBP12.65□□□□□ -0.38
COL4A5-201ENST00000328300 TRIM6Q9C030 488 aaPredicted RBP12.65□□□□□ -0.38
COL4A5-201ENST00000328300 ZNF408Q9H9D4 720 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 MMP10P09238 476 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 AP3B2Q13367 1082 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 ADD1P35611 737 aaKnown RBP12.65□□□□□ -0.38
COL4A5-201ENST00000328300 ALCAMQ13740 583 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 ZNF569Q5MCW4 686 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 SFMBT2Q5VUG0 894 aa12.65□□□□□ -0.38
COL4A5-201ENST00000328300 LRRC47Q8N1G4 583 aaKnown RBP12.65□□□□□ -0.38
COL4A5-201ENST00000328300 ZNF512BQ96KM6 892 aaPredicted RBP12.65□□□□□ -0.38
COL4A5-201ENST00000328300 MECOMQ03112 1051 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms