RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 SCP2P22307 547 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 NNTQ13423 1086 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 WLSQ5T9L3 541 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 EMC10Q5UCC4 262 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 MICALCLQ6ZW33 695 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 SPATA4Q8NEY3 305 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 ZNF473Q8WTR7 871 aaKnown RBP14.29□□□□□ -0.12
CCDC60-201ENST00000327554 FAM212AQ96EL1 285 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 RUFY1Q96T51 708 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 MTRQ99707 1265 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC60-201ENST00000327554 TIAM2Q8IVF5 1701 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 MACROD2A1Z1Q3 448 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 TNFRSF8P28908 595 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 CYLC1P35663 651 aaPredicted RBP14.29□□□□□ -0.12
CCDC60-201ENST00000327554 MCAMP43121 646 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 PLCB4Q15147 1175 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 HAUS3Q68CZ6 603 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 KCTD16Q68DU8 428 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 FERMT2Q96AC1 680 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 TTYH3Q9C0H2 523 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 POLD4Q9HCU8 107 aa14.29□□□□□ -0.12
CCDC60-201ENST00000327554 PDS5AQ29RF7 1337 aaKnown RBP14.28□□□□□ -0.12
CCDC60-201ENST00000327554 RDXP35241 583 aaKnown RBP14.28□□□□□ -0.12
CCDC60-201ENST00000327554 TDO2P48775 406 aa14.28□□□□□ -0.12
CCDC60-201ENST00000327554 GUCY1A3Q02108 690 aa14.28□□□□□ -0.12
CCDC60-201ENST00000327554 PTGISQ16647 500 aa14.28□□□□□ -0.12
CCDC60-201ENST00000327554 TSR1Q2NL82 804 aaKnown RBP14.28□□□□□ -0.12
CCDC60-201ENST00000327554 CCDC40Q4G0X9 1142 aa14.28□□□□□ -0.12
CCDC60-201ENST00000327554 ZNF658Q5TYW1 1059 aaPredicted RBP14.28□□□□□ -0.12
CCDC60-201ENST00000327554 PDXDC2PQ6P474 469 aa14.28□□□□□ -0.12
CCDC60-201ENST00000327554 CCDC13Q8IYE1 715 aa14.28□□□□□ -0.12
CCDC60-201ENST00000327554 NHEJ1Q9H9Q4 299 aaPredicted RBP14.28□□□□□ -0.12
CCDC60-201ENST00000327554 STIM2Q9P246 746 aa14.28□□□□□ -0.12
CCDC60-201ENST00000327554 AXIN2Q9Y2T1 843 aa14.28□□□□□ -0.12
CCDC60-201ENST00000327554 DISP2A7MBM2 1401 aa14.28□□□□□ -0.12
CCDC60-201ENST00000327554 KRT14P02533 472 aa14.27□□□□□ -0.12
CCDC60-201ENST00000327554 GCP02774 474 aa14.27□□□□□ -0.12
CCDC60-201ENST00000327554 FAM69CQ0P6D2 419 aa14.27□□□□□ -0.12
CCDC60-201ENST00000327554 MIEF2Q96C03 454 aa14.27□□□□□ -0.12
CCDC60-201ENST00000327554 AGPAT5Q9NUQ2 364 aa14.27□□□□□ -0.12
CCDC60-201ENST00000327554 TRIM49BA6NDI0 452 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 ZNF233A6NK53 670 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 RASSF10A6NK89 507 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 NBPF26B4DH59 902 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 H7C1D1 291 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 GTPBP6O43824 516 aaPredicted RBP14.27□□□□□ -0.13
CCDC60-201ENST00000327554 PHKG2P15735 406 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 PRCPP42785 496 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 CYP27A1Q02318 531 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 CTDSPL2Q05D32 466 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 NBPF10Q6P3W6 841 aaKnown RBP14.27□□□□□ -0.13
CCDC60-201ENST00000327554 C6orf89Q6UWU4 347 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 TTLL7Q6ZT98 887 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 CCDC170Q8IYT3 715 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 IQCKQ8N0W5 287 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 TTC5Q8N0Z6 440 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 NBPF15Q8N660 670 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 SMCR8Q8TEV9 937 aaPredicted RBP14.27□□□□□ -0.13
CCDC60-201ENST00000327554 GGA2Q9UJY4 613 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 MAPK8IP1Q9UQF2 711 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 GDAQ9Y2T3 454 aa14.27□□□□□ -0.13
CCDC60-201ENST00000327554 ZNF263O14978 683 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 PPP1R37O75864 691 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 VAV2P52735 878 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 HDLBPQ00341 1268 aaKnown RBP14.26□□□□□ -0.13
CCDC60-201ENST00000327554 APBA1Q02410 837 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 MYCBPAPQ8TBZ2 947 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 N4BP2L2Q92802 583 aaPredicted RBP14.26□□□□□ -0.13
CCDC60-201ENST00000327554 EPB41L4AQ9HCS5 686 aaPredicted RBP14.26□□□□□ -0.13
CCDC60-201ENST00000327554 SLC40A1Q9NP59 571 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 PIH1D3Q9NQM4 214 aaKnown RBP14.26□□□□□ -0.13
CCDC60-201ENST00000327554 IQSEC3Q9UPP2 1182 aaPredicted RBP14.26□□□□□ -0.13
CCDC60-201ENST00000327554 CAPN6Q9Y6Q1 641 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 PRLRP16471 622 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 UBE3CQ15386 1083 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 ALX1Q15699 326 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 RNF187Q5TA31 235 aaPredicted RBP14.26□□□□□ -0.13
CCDC60-201ENST00000327554 NLRP14Q86W24 1093 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 CCT8L2Q96SF2 557 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 SMARCAL1Q9NZC9 954 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 ZNF532Q9HCE3 1301 aa14.26□□□□□ -0.13
CCDC60-201ENST00000327554 MATR3P43243 847 aaKnown RBP eCLIP14.25□□□□□ -0.13
CCDC60-201ENST00000327554 SEC24CP53992 1094 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 SATB1Q01826 763 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 KIF5AQ12840 1032 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 STRBPQ96SI9 672 aaKnown RBP14.25□□□□□ -0.13
CCDC60-201ENST00000327554 OSBPL9Q96SU4 736 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 VEZTQ9HBM0 779 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 EHD2Q9NZN4 543 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 ODF2LQ9ULJ1 636 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 RIC1Q4ADV7 1423 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 IPO7O95373 1038 aaKnown RBP14.25□□□□□ -0.13
CCDC60-201ENST00000327554 EEF1GP26641 437 aaKnown RBP14.25□□□□□ -0.13
CCDC60-201ENST00000327554 NF2P35240 595 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 PMS1P54277 932 aaKnown RBP14.25□□□□□ -0.13
CCDC60-201ENST00000327554 CEP85LQ5SZL2 805 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 IQCA1Q86XH1 822 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 TRIM58Q8NG06 486 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 PIK3R5Q8WYR1 880 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms