RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 RFX7Q2KHR2 1363 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 CCDC85CA6NKD9 419 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 RNF225M0QZC1 329 aaPredicted RBP8.25□□□□□ -1.09
CLRN1-202ENST00000327047 KIAA0754O94854 1291 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 CASP1P29466 404 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 PLCD1P51178 756 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 TIMM10P62072 90 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 HTRA3P83110 453 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 ATP2B2Q01814 1243 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 TRDNQ13061 729 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 TRIM28Q13263 835 aaKnown RBP8.25□□□□□ -1.09
CLRN1-202ENST00000327047 HSP90AB3PQ58FF7 597 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 TRAPPC11Q7Z392 1133 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 DNAJC10Q8IXB1 793 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 CAGE1Q8TC20 777 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 GLMNQ92990 594 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 RRP36Q96EU6 259 aaKnown RBP8.25□□□□□ -1.09
CLRN1-202ENST00000327047 ZBTB3Q9H5J0 574 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 CWC25Q9NXE8 425 aaPredicted RBP8.25□□□□□ -1.09
CLRN1-202ENST00000327047 ADD3Q9UEY8 706 aaKnown RBP8.25□□□□□ -1.09
CLRN1-202ENST00000327047 KCNG1Q9UIX4 513 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 TJP1Q07157 1748 aa8.25□□□□□ -1.09
CLRN1-202ENST00000327047 NDUFAB1O14561 156 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 CD44P16070 742 aaKnown RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 GPTP24298 496 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 HMGB2P26583 209 aaKnown RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 RDXP35241 583 aaKnown RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 AFMP43652 599 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 SARSP49591 514 aaKnown RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 ANTXR2P58335 489 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 RALYLQ86SE5 291 aaKnown RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 RPAINQ86UA6 219 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 TMTC1Q8IUR5 882 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 ANKRD18AQ8IVF6 992 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 CENPHQ9H3R5 247 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 ABHD10Q9NUJ1 306 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 GNL3LQ9NVN8 582 aaKnown RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 MYO1AQ9UBC5 1043 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 SAR1BQ9Y6B6 198 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 BTAF1O14981 1849 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 AFDNP55196 1824 aaKnown RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 ZNF185O15231 689 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 RNF113AO15541 343 aaKnown RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 ZEB2O60315 1214 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 PBX1P40424 430 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 ATP1A2P50993 1020 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 MRPS25P82663 173 aaKnown RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 KCNA1Q09470 495 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 PDCLQ13371 301 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 TCIRG1Q13488 830 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 IMMTQ16891 758 aaKnown RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 WASHC4Q2M389 1173 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 FILIP1LQ4L180 1135 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 FKBP15Q5T1M5 1219 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 NT5DC1Q5TFE4 455 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 CYP26C1Q6V0L0 522 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 CCNI2Q6ZMN8 369 aaPredicted RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 ZKSCAN4Q969J2 545 aaPredicted RBP8.24□□□□□ -1.09
CLRN1-202ENST00000327047 OSBP2Q969R2 916 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 CHP1Q99653 195 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 TMOD3Q9NYL9 352 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 DENND2AQ9ULE3 1009 aa8.24□□□□□ -1.09
CLRN1-202ENST00000327047 SYNRGQ9UMZ2 1314 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 FGAP02671 866 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 HSPA8P11142 646 aaKnown RBP8.23□□□□□ -1.09
CLRN1-202ENST00000327047 FNTAP49354 379 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 MNX1P50219 401 aaPredicted RBP8.23□□□□□ -1.09
CLRN1-202ENST00000327047 METAP2P50579 478 aaKnown RBP eCLIP8.23□□□□□ -1.09
CLRN1-202ENST00000327047 C1QBPQ07021 282 aaKnown RBP8.23□□□□□ -1.09
CLRN1-202ENST00000327047 C2orf54Q08AI8 447 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 TRIM29Q14134 588 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 LRRC24Q50LG9 513 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 SPATA1Q5VX52 437 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 USP49Q70CQ1 688 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 MICU3Q86XE3 530 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 MB21D2Q8IYB1 491 aaPredicted RBP8.23□□□□□ -1.09
CLRN1-202ENST00000327047 N4BP2L2Q92802 583 aaPredicted RBP8.23□□□□□ -1.09
CLRN1-202ENST00000327047 CDCA7Q9BWT1 371 aaPredicted RBP8.23□□□□□ -1.09
CLRN1-202ENST00000327047 VPS16Q9H269 839 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 PRDM16Q9HAZ2 1276 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 ZMYM6O95789 1325 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 CNTNAP1P78357 1384 aa8.23□□□□□ -1.09
CLRN1-202ENST00000327047 CCDC189A1A4V9 331 aa8.22□□□□□ -1.09
CLRN1-202ENST00000327047 TARSL2A2RTX5 802 aaKnown RBP8.22□□□□□ -1.09
CLRN1-202ENST00000327047 N4BP3O15049 544 aa8.22□□□□□ -1.09
CLRN1-202ENST00000327047 ERCC5P28715 1186 aaPredicted RBP8.22□□□□□ -1.09
CLRN1-202ENST00000327047 KRT9P35527 623 aa8.22□□□□□ -1.09
CLRN1-202ENST00000327047 FKBP4Q02790 459 aaKnown RBP eCLIP8.22□□□□□ -1.09
CLRN1-202ENST00000327047 NEDD9Q14511 834 aa8.22□□□□□ -1.09
CLRN1-202ENST00000327047 PPP2R5AQ15172 486 aa8.22□□□□□ -1.09
CLRN1-202ENST00000327047 RNF187Q5TA31 235 aaPredicted RBP8.22□□□□□ -1.09
CLRN1-202ENST00000327047 KCTD16Q68DU8 428 aa8.22□□□□□ -1.09
CLRN1-202ENST00000327047 FBXL16Q8N461 479 aa8.22□□□□□ -1.09
CLRN1-202ENST00000327047 FBXO22Q8NEZ5 403 aa8.22□□□□□ -1.09
CLRN1-202ENST00000327047 NCOA7Q8NI08 942 aa8.22□□□□□ -1.09
CLRN1-202ENST00000327047 JAKMIP2Q96AA8 810 aa8.22□□□□□ -1.09
CLRN1-202ENST00000327047 ZNF594Q96JF6 807 aaPredicted RBP8.22□□□□□ -1.09
CLRN1-202ENST00000327047 CTAGE1Q96RT6 745 aa8.22□□□□□ -1.09
CLRN1-202ENST00000327047 PUS3Q9BZE2 481 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms