RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CDCA5Q96FF9 252 aa14.68□□□□□ -0.06
DDX39A-202ENST00000324340 WDR18Q9BV38 432 aa14.68□□□□□ -0.06
DDX39A-202ENST00000324340 GLIS2Q9BZE0 524 aaPredicted RBP14.68□□□□□ -0.06
DDX39A-202ENST00000324340 KIAA1683Q9H0B3 1180 aa14.68□□□□□ -0.06
DDX39A-202ENST00000324340 GPCPD1Q9NPB8 672 aa14.68□□□□□ -0.06
DDX39A-202ENST00000324340 CCDC39Q9UFE4 941 aa14.68□□□□□ -0.06
DDX39A-202ENST00000324340 ZKSCAN5Q9Y2L8 839 aa14.68□□□□□ -0.06
DDX39A-202ENST00000324340 hCG_1984214I3L0E3 225 aa14.67□□□□□ -0.06
DDX39A-202ENST00000324340 BMP3P12645 472 aa14.67□□□□□ -0.06
DDX39A-202ENST00000324340 PTPRAP18433 802 aa14.67□□□□□ -0.06
DDX39A-202ENST00000324340 MAP3K11Q16584 847 aa14.67□□□□□ -0.06
DDX39A-202ENST00000324340 EAPPQ56P03 285 aaPredicted RBP14.67□□□□□ -0.06
DDX39A-202ENST00000324340 KIAA1755Q5JYT7 1200 aa14.67□□□□□ -0.06
DDX39A-202ENST00000324340 TTBK2Q6IQ55 1244 aa14.67□□□□□ -0.06
DDX39A-202ENST00000324340 KCTD1Q719H9 257 aa14.67□□□□□ -0.06
DDX39A-202ENST00000324340 ZNF713Q8N859 430 aaPredicted RBP14.67□□□□□ -0.06
DDX39A-202ENST00000324340 ZKSCAN4Q969J2 545 aaPredicted RBP14.67□□□□□ -0.06
DDX39A-202ENST00000324340 UBA5Q9GZZ9 404 aa14.67□□□□□ -0.06
DDX39A-202ENST00000324340 CPVLQ9H3G5 476 aa14.67□□□□□ -0.06
DDX39A-202ENST00000324340 JMJD4Q9H9V9 463 aa14.67□□□□□ -0.06
DDX39A-202ENST00000324340 KIF28PB7ZC32 967 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 PPP1R12BO60237 982 aaPredicted RBP14.66□□□□□ -0.06
DDX39A-202ENST00000324340 PLA2G6O60733 806 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 NPY5RQ15761 445 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 ATL3Q6DD88 541 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 MCTP1Q6DN14 999 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 DLK2Q6UY11 383 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 CCDC84Q86UT8 332 aaPredicted RBP14.66□□□□□ -0.06
DDX39A-202ENST00000324340 ADGRF4Q8IZF3 695 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 TMEM87AQ8NBN3 555 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 LPAR1Q92633 364 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 CHAMP1Q96JM3 812 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 PIGSQ96S52 555 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 FOXP1Q9H334 677 aaPredicted RBP14.66□□□□□ -0.06
DDX39A-202ENST00000324340 AS3MTQ9HBK9 375 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 PICK1Q9NRD5 415 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 BARHL2Q9NY43 387 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 VPS54Q9P1Q0 977 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 FZD1Q9UP38 647 aa14.66□□□□□ -0.06
DDX39A-202ENST00000324340 UQCRHLA0A096LP55 91 aa14.65□□□□□ -0.06
DDX39A-202ENST00000324340 STXBP3O00186 592 aa14.65□□□□□ -0.06
DDX39A-202ENST00000324340 UQCRHP07919 91 aa14.65□□□□□ -0.06
DDX39A-202ENST00000324340 NF2P35240 595 aa14.65□□□□□ -0.06
DDX39A-202ENST00000324340 MAP3K9P80192 1104 aa14.65□□□□□ -0.06
DDX39A-202ENST00000324340 DNM1Q05193 864 aaKnown RBP14.65□□□□□ -0.06
DDX39A-202ENST00000324340 SAFBQ15424 915 aaKnown RBP eCLIP14.65□□□□□ -0.06
DDX39A-202ENST00000324340 WWC2Q6AWC2 1192 aa14.65□□□□□ -0.06
DDX39A-202ENST00000324340 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.65□□□□□ -0.06
DDX39A-202ENST00000324340 PRIMPOLQ96LW4 560 aa14.65□□□□□ -0.06
DDX39A-202ENST00000324340 SEC63Q9UGP8 760 aaKnown RBP14.65□□□□□ -0.06
DDX39A-202ENST00000324340 KCNJ14Q9UNX9 436 aa14.65□□□□□ -0.06
DDX39A-202ENST00000324340 UTRNP46939 3433 aa14.65□□□□□ -0.06
DDX39A-202ENST00000324340 TCHHQ07283 1943 aa14.65□□□□□ -0.06
DDX39A-202ENST00000324340 PNMA6FA0A0J9YX94 578 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 USP17L10C9JJH3 530 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 ZBTB5O15062 677 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 LETM1O95202 739 aaPredicted RBP14.64□□□□□ -0.07
DDX39A-202ENST00000324340 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 POTEJP0CG39 1038 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 SLC16A2P36021 539 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 IREB2P48200 963 aaKnown RBP14.64□□□□□ -0.07
DDX39A-202ENST00000324340 USP14P54578 494 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 KRT85P78386 507 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 GALNT17Q6IS24 598 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 TYW1BQ6NUM6 668 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 FAM173BQ6P4H8 233 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 DIS3L2Q8IYB7 885 aaKnown RBP14.64□□□□□ -0.07
DDX39A-202ENST00000324340 SPICE1Q8N0Z3 855 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 DAGLBQ8NCG7 672 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 ZNF280CQ8ND82 737 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 CCDC148Q8NFR7 591 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 NUP88Q99567 741 aaPredicted RBP14.64□□□□□ -0.07
DDX39A-202ENST00000324340 FEZ1Q99689 392 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 RRAGCQ9HB90 399 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 CNPY2Q9Y2B0 182 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 SNCAIPQ9Y6H5 919 aa14.64□□□□□ -0.07
DDX39A-202ENST00000324340 BAZ2BQ9UIF8 2168 aaKnown RBP14.64□□□□□ -0.07
DDX39A-202ENST00000324340 ESYT2A0FGR8 921 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 BTBD18B2RXH4 712 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 TMEM232C9JQI7 657 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 WDR46O15213 610 aaKnown RBP14.63□□□□□ -0.07
DDX39A-202ENST00000324340 RAD21O60216 631 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 CALML3P27482 149 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 GTF2F1P35269 517 aaKnown RBP eCLIP14.63□□□□□ -0.076e-8■■■■■ 27.6
DDX39A-202ENST00000324340 KRT2P35908 639 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 STAT2P52630 851 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 BACE1P56817 501 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 VGLL4Q14135 290 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 HEATR3Q7Z4Q2 680 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 LDHDQ86WU2 507 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 HOMER1Q86YM7 354 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 NOSTRINQ8IVI9 506 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 CCDC12Q8WUD4 166 aaPredicted RBP14.63□□□□□ -0.07
DDX39A-202ENST00000324340 PIBF1Q8WXW3 757 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 GPKOWQ92917 476 aaPredicted RBP eCLIP14.63□□□□□ -0.078e-6■■□□□ 13.6
DDX39A-202ENST00000324340 TNFRSF25Q93038 417 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 C12orf42Q96LP6 360 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 ZMYND12Q9H0C1 365 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 VAT1LQ9HCJ6 419 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 LMBRD1Q9NUN5 540 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 763 ms