RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 ZNF772Q68DY9 489 aaPredicted RBP19.03■□□□□ 0.64
PPP3CA-201ENST00000323055 GALNT17Q6IS24 598 aa19.03■□□□□ 0.64
PPP3CA-201ENST00000323055 CHURC1Q8WUH1 139 aa19.03■□□□□ 0.64
PPP3CA-201ENST00000323055 UBN2Q6ZU65 1347 aa19.02■□□□□ 0.64
PPP3CA-201ENST00000323055 SALL3Q9BXA9 1300 aa19.02■□□□□ 0.64
PPP3CA-201ENST00000323055 FAM196BA6NMK8 535 aa19.02■□□□□ 0.64
PPP3CA-201ENST00000323055 RPN1P04843 607 aaKnown RBP19.02■□□□□ 0.64
PPP3CA-201ENST00000323055 CARD6Q9BX69 1037 aa19.02■□□□□ 0.64
PPP3CA-201ENST00000323055 ADGRB2O60241 1585 aa19.02■□□□□ 0.64
PPP3CA-201ENST00000323055 FAM170AA1A519 330 aa19.02■□□□□ 0.64
PPP3CA-201ENST00000323055 NPR1P16066 1061 aa19.02■□□□□ 0.64
PPP3CA-201ENST00000323055 MORC3Q14149 939 aa19.02■□□□□ 0.64
PPP3CA-201ENST00000323055 NLRC4Q9NPP4 1024 aa19.02■□□□□ 0.64
PPP3CA-201ENST00000323055 DDX25Q9UHL0 483 aaKnown RBP19.02■□□□□ 0.64
PPP3CA-201ENST00000323055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.02■□□□□ 0.64
PPP3CA-201ENST00000323055 NTSR2O95665 410 aa19.02■□□□□ 0.63
PPP3CA-201ENST00000323055 LONP1P36776 959 aaKnown RBP19.02■□□□□ 0.63
PPP3CA-201ENST00000323055 TMTC3Q6ZXV5 915 aa19.02■□□□□ 0.63
PPP3CA-201ENST00000323055 DGKHQ86XP1 1220 aa19.02■□□□□ 0.63
PPP3CA-201ENST00000323055 MYCT1Q8N699 235 aa19.02■□□□□ 0.63
PPP3CA-201ENST00000323055 TRIML1Q8N9V2 468 aa19.02■□□□□ 0.63
PPP3CA-201ENST00000323055 CACTINQ8WUQ7 758 aaKnown RBP19.02■□□□□ 0.63
PPP3CA-201ENST00000323055 GOLGA1Q92805 767 aa19.02■□□□□ 0.63
PPP3CA-201ENST00000323055 CCDC113Q9H0I3 377 aa19.02■□□□□ 0.63
PPP3CA-201ENST00000323055 KCNJ18B7U540 433 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 ZNF500O60304 480 aaPredicted RBP19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 ALAS1P13196 640 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 CKAP4Q07065 602 aaKnown RBP19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 KCNJ12Q14500 433 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 TXNRD1Q16881 649 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 CYP26C1Q6V0L0 522 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 COA1Q9GZY4 146 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 GOLPH3LQ9H4A5 285 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 ARHGAP23Q9P227 1491 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 EVCP57679 992 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 SIGLEC1Q9BZZ2 1709 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 GCNT3O95395 438 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 EPB41P11171 864 aaKnown RBP19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 HARSP12081 509 aaKnown RBP19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 TRAPPC10P48553 1259 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 SETQ01105 290 aaPredicted RBP19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 GPATCH4Q5T3I0 446 aaKnown RBP19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 USP37Q86T82 979 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 GPBP1Q86WP2 473 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 CEP112Q8N8E3 955 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 BCCIPQ9P287 314 aaKnown RBP eCLIP19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 SLIT1O75093 1534 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 WDHD1O75717 1129 aaPredicted RBP19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 GRM1Q13255 1194 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 VPS72Q15906 364 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 SPATA1Q5VX52 437 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 FRMD4BQ9Y2L6 1034 aa19.01■□□□□ 0.63
PPP3CA-201ENST00000323055 GAS7O60861 476 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 IFI16Q16666 785 aaKnown RBP19■□□□□ 0.63
PPP3CA-201ENST00000323055 RGS22Q8NE09 1264 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 MRPL44Q9H9J2 332 aaKnown RBP19■□□□□ 0.63
PPP3CA-201ENST00000323055 RPAP1Q9BWH6 1393 aaPredicted RBP19■□□□□ 0.63
PPP3CA-201ENST00000323055 SLFN14P0C7P3 912 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 ATP1A3P13637 1013 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 UBXN2AP68543 259 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 GPSM2P81274 684 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 SF3B3Q15393 1217 aaKnown RBP19■□□□□ 0.63
PPP3CA-201ENST00000323055 ASPRV1Q53RT3 343 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 GSTTP1A0A1W2PQM5 241 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 C21orf2O43822 256 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 IFFO1Q0D2I5 559 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 TRIM14Q14142 442 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 CC2D2BQ6DHV5 1058 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 TMTC1Q8IUR5 882 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 TIGD1Q96MW7 591 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 MPHOSPH6Q99547 160 aaKnown RBP19■□□□□ 0.63
PPP3CA-201ENST00000323055 TMEM47Q9BQJ4 181 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 ZNF408Q9H9D4 720 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 TMOD4Q9NZQ9 345 aa19■□□□□ 0.63
PPP3CA-201ENST00000323055 SRPRBQ9Y5M8 271 aaKnown RBP19■□□□□ 0.63
PPP3CA-201ENST00000323055 GUCY1A2P33402 732 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 RDH13Q8NBN7 331 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 NT5C3AQ9H0P0 336 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 CASP1P29466 404 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 GSDMAQ96QA5 445 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 SENP2Q9HC62 589 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 KIF28PB7ZC32 967 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 ALDH8A1Q9H2A2 487 aaPredicted RBP18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 SPATA31A5Q5VU36 1347 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 SPATA31A7Q8IWB4 1347 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 MYRIPQ8NFW9 859 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 NSUN4Q96CB9 384 aaKnown RBP18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 AMNQ9BXJ7 453 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 KANSL2Q9H9L4 492 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 MAN1B1Q9UKM7 699 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 PCDHB13Q9Y5F0 798 aa18.99■□□□□ 0.63
PPP3CA-201ENST00000323055 ABCC12Q96J65 1359 aa18.98■□□□□ 0.63
PPP3CA-201ENST00000323055 JCADQ9P266 1359 aa18.98■□□□□ 0.63
PPP3CA-201ENST00000323055 TMEM110-MUSTN1A8MSY1 372 aa18.98■□□□□ 0.63
PPP3CA-201ENST00000323055 ADRA2BP18089 450 aa18.98■□□□□ 0.63
PPP3CA-201ENST00000323055 INTS5Q6P9B9 1019 aaKnown RBP18.98■□□□□ 0.63
PPP3CA-201ENST00000323055 PSMB7Q99436 277 aa18.98■□□□□ 0.63
PPP3CA-201ENST00000323055 SWAP70Q9UH65 585 aa18.98■□□□□ 0.63
PPP3CA-201ENST00000323055 FER1L4A9Z1Z3 1794 aa18.98■□□□□ 0.63
PPP3CA-201ENST00000323055 MASTLQ96GX5 879 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms