RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 RMND1Q9NWS8 449 aa20.04■□□□□ 0.8
PRKCB-202ENST00000321728 DUSP10Q9Y6W6 482 aa20.04■□□□□ 0.8
PRKCB-202ENST00000321728 BCL9LQ86UU0 1499 aa20.04■□□□□ 0.8
PRKCB-202ENST00000321728 PARP4Q9UKK3 1724 aaKnown RBP20.04■□□□□ 0.8
PRKCB-202ENST00000321728 RCCD1A6NED2 376 aa20.03■□□□□ 0.8
PRKCB-202ENST00000321728 H7C1D1 291 aa20.03■□□□□ 0.8
PRKCB-202ENST00000321728 CYLC1P35663 651 aaPredicted RBP20.03■□□□□ 0.8
PRKCB-202ENST00000321728 PKN1Q16512 942 aa20.03■□□□□ 0.8
PRKCB-202ENST00000321728 PDXDC2PQ6P474 469 aa20.03■□□□□ 0.8
PRKCB-202ENST00000321728 CAPN11Q9UMQ6 739 aa20.03■□□□□ 0.8
PRKCB-202ENST00000321728 MYH6P13533 1939 aa20.03■□□□□ 0.8
PRKCB-202ENST00000321728 LGALS16A8MUM7 142 aa20.03■□□□□ 0.8
PRKCB-202ENST00000321728 ARID4AP29374 1257 aaPredicted RBP20.03■□□□□ 0.8
PRKCB-202ENST00000321728 IRF2BP1Q8IU81 584 aa20.03■□□□□ 0.8
PRKCB-202ENST00000321728 SPATA5Q8NB90 893 aa20.03■□□□□ 0.8
PRKCB-202ENST00000321728 ZNHIT6Q9NWK9 470 aaKnown RBP20.03■□□□□ 0.8
PRKCB-202ENST00000321728 ALS2Q96Q42 1657 aa20.03■□□□□ 0.8
PRKCB-202ENST00000321728 EIF3HO15372 352 aaKnown RBP eCLIP20.02■□□□□ 0.8
PRKCB-202ENST00000321728 FBXW10Q5XX13 1052 aa20.02■□□□□ 0.8
PRKCB-202ENST00000321728 ANKRD18AQ8IVF6 992 aa20.02■□□□□ 0.8
PRKCB-202ENST00000321728 LCORLQ8N3X6 602 aa20.02■□□□□ 0.8
PRKCB-202ENST00000321728 VGLL2Q8N8G2 317 aa20.02■□□□□ 0.8
PRKCB-202ENST00000321728 AENQ8WTP8 325 aaKnown RBP20.02■□□□□ 0.8
PRKCB-202ENST00000321728 RRP36Q96EU6 259 aaKnown RBP20.02■□□□□ 0.8
PRKCB-202ENST00000321728 MNAT1P51948 309 aa20.02■□□□□ 0.8
PRKCB-202ENST00000321728 MRPS25P82663 173 aaKnown RBP20.02■□□□□ 0.8
PRKCB-202ENST00000321728 ATP2C1P98194 919 aaPredicted RBP20.02■□□□□ 0.8
PRKCB-202ENST00000321728 KIF6Q6ZMV9 814 aa20.02■□□□□ 0.8
PRKCB-202ENST00000321728 SAMM50Q9Y512 469 aa20.02■□□□□ 0.8
PRKCB-202ENST00000321728 TNKSO95271 1327 aa20.02■□□□□ 0.79
PRKCB-202ENST00000321728 MINDY4BA8MYZ0 360 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 TRIM21P19474 475 aaKnown RBP20.01■□□□□ 0.79
PRKCB-202ENST00000321728 INPP5BP32019 993 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 MATR3P43243 847 aaKnown RBP eCLIP20.01■□□□□ 0.792e-6■■■■□ 22.2
PRKCB-202ENST00000321728 CYP27A1Q02318 531 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 RNF41Q9H4P4 317 aaPredicted RBP20.01■□□□□ 0.79
PRKCB-202ENST00000321728 AGPAT5Q9NUQ2 364 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 PCDH11XQ9BZA7 1347 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 PCDH11YQ9BZA8 1340 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 A0A1W2PQC6 194 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 MCM7P33993 719 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 RCAN1P53805 252 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 TRIM28Q13263 835 aaKnown RBP20.01■□□□□ 0.79
PRKCB-202ENST00000321728 EZH2Q15910 746 aaKnown RBP20.01■□□□□ 0.79
PRKCB-202ENST00000321728 GBP6Q6ZN66 633 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 AMOTL1Q8IY63 956 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 MIGA1Q8NAN2 632 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 HDAC7Q8WUI4 952 aa20.01■□□□□ 0.79
PRKCB-202ENST00000321728 NHEJ1Q9H9Q4 299 aaPredicted RBP20.01■□□□□ 0.79
PRKCB-202ENST00000321728 MAGEC2Q9UBF1 373 aaPredicted RBP20.01■□□□□ 0.79
PRKCB-202ENST00000321728 COL18A1P39060 1754 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 A0A0G2JS52 829 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 ANO9A1A5B4 782 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 SMIM22K7EJ46 135 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 CCDC91Q7Z6B0 441 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 PCMTD1Q96MG8 357 aaPredicted RBP20■□□□□ 0.79
PRKCB-202ENST00000321728 RUFY1Q96T51 708 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 GOLGA8KD6RF30 607 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 PLEKHA8P1O95397 391 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 HNRNPH1P31943 449 aaKnown RBP20■□□□□ 0.79
PRKCB-202ENST00000321728 PPARAQ07869 468 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 KIF5AQ12840 1032 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 TRIM47Q96LD4 638 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 CEP89Q96ST8 783 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 LRRC1Q9BTT6 524 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 GRIN2DO15399 1336 aa20■□□□□ 0.79
PRKCB-202ENST00000321728 B4DLN1 442 aa19.99■□□□□ 0.79
PRKCB-202ENST00000321728 OPA1O60313 960 aa19.99■□□□□ 0.79
PRKCB-202ENST00000321728 PMS1P54277 932 aaKnown RBP19.99■□□□□ 0.79
PRKCB-202ENST00000321728 SWT1Q5T5J6 900 aaKnown RBP19.99■□□□□ 0.79
PRKCB-202ENST00000321728 SECISBP2LQ93073 1101 aaKnown RBP19.99■□□□□ 0.79
PRKCB-202ENST00000321728 PYM1Q9BRP8 204 aaKnown RBP19.99■□□□□ 0.79
PRKCB-202ENST00000321728 DMGDHQ9UI17 866 aaKnown RBP19.99■□□□□ 0.79
PRKCB-202ENST00000321728 IQSEC3Q9UPP2 1182 aaPredicted RBP19.99■□□□□ 0.79
PRKCB-202ENST00000321728 RTL9Q8NET4 1388 aa19.99■□□□□ 0.79
PRKCB-202ENST00000321728 EEF1GP26641 437 aaKnown RBP19.99■□□□□ 0.79
PRKCB-202ENST00000321728 CTSWP56202 376 aa19.99■□□□□ 0.79
PRKCB-202ENST00000321728 SLC7A5Q01650 507 aa19.99■□□□□ 0.79
PRKCB-202ENST00000321728 PIK3AP1Q6ZUJ8 805 aa19.99■□□□□ 0.79
PRKCB-202ENST00000321728 ZNF507Q8TCN5 953 aa19.99■□□□□ 0.79
PRKCB-202ENST00000321728 EEF2KMTQ96G04 330 aa19.99■□□□□ 0.79
PRKCB-202ENST00000321728 PRPF3O43395 683 aaKnown RBP19.99■□□□□ 0.79
PRKCB-202ENST00000321728 GNAT2P19087 354 aa19.99■□□□□ 0.79
PRKCB-202ENST00000321728 RASGRF1Q13972 1273 aa19.99■□□□□ 0.79
PRKCB-202ENST00000321728 ZNF662Q6ZS27 426 aa19.99■□□□□ 0.79
PRKCB-202ENST00000321728 POTEDQ86YR6 584 aa19.99■□□□□ 0.79
PRKCB-202ENST00000321728 STAT6P42226 847 aa19.98■□□□□ 0.79
PRKCB-202ENST00000321728 PUM3Q15397 648 aaKnown RBP19.98■□□□□ 0.79
PRKCB-202ENST00000321728 MEA1Q16626 185 aa19.98■□□□□ 0.79
PRKCB-202ENST00000321728 CCDC96Q2M329 555 aa19.98■□□□□ 0.79
PRKCB-202ENST00000321728 ADSSL1Q8N142 457 aa19.98■□□□□ 0.79
PRKCB-202ENST00000321728 RASSF8Q8NHQ8 419 aa19.98■□□□□ 0.79
PRKCB-202ENST00000321728 SMCR8Q8TEV9 937 aaPredicted RBP19.98■□□□□ 0.79
PRKCB-202ENST00000321728 LPIN2Q92539 896 aa19.98■□□□□ 0.79
PRKCB-202ENST00000321728 ESR2Q92731 530 aa19.98■□□□□ 0.79
PRKCB-202ENST00000321728 PDS5AQ29RF7 1337 aaKnown RBP19.98■□□□□ 0.79
PRKCB-202ENST00000321728 KCPQ6ZWJ8 1503 aa19.98■□□□□ 0.79
PRKCB-202ENST00000321728 KLK7P49862 253 aa19.98■□□□□ 0.79
PRKCB-202ENST00000321728 DNM2P50570 870 aa19.98■□□□□ 0.79
PRKCB-202ENST00000321728 PPP2R5BQ15173 497 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms