RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 CNNM4Q6P4Q7 775 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 ALKBH8Q96BT7 664 aaKnown RBP9.76□□□□□ -0.85
SSBP2-201ENST00000320672 EPC1Q9H2F5 836 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 DNMBPQ6XZF7 1577 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 GPATCH8Q9UKJ3 1502 aaKnown RBP9.76□□□□□ -0.85
SSBP2-201ENST00000320672 HSPD1P10809 573 aaKnown RBP9.76□□□□□ -0.85
SSBP2-201ENST00000320672 PLCD1P51178 756 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 C2orf54Q08AI8 447 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 MYLK4Q86YV6 388 aaPredicted RBP9.76□□□□□ -0.85
SSBP2-201ENST00000320672 PRDM5Q9NQX1 630 aaPredicted RBP9.76□□□□□ -0.85
SSBP2-201ENST00000320672 PANK4Q9NVE7 773 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 HMGXB3Q12766 1538 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 SMTNP53814 917 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 GNGT1P63211 74 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 KRT71Q3SY84 523 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 USP17L2Q6R6M4 530 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 TTC30AQ86WT1 665 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 SYMPKQ92797 1274 aaKnown RBP9.76□□□□□ -0.85
SSBP2-201ENST00000320672 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.76□□□□□ -0.85
SSBP2-201ENST00000320672 LIG3P49916 1009 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 MKRN4PQ13434 485 aaPredicted RBP9.76□□□□□ -0.85
SSBP2-201ENST00000320672 MORC3Q14149 939 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 NEDD9Q14511 834 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 ZBTB1Q9Y2K1 713 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 KCNJ18B7U540 433 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 FTCDO95954 541 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 KCNJ12Q14500 433 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 ZNF394Q53GI3 561 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 CHMP6Q96FZ7 201 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 RILPL1Q5EBL4 403 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 CCDC26Q8TAB7 109 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 DEPTORQ8TB45 409 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 CSRNP2Q9H175 543 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 TBK1Q9UHD2 729 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 MAD1L1Q9Y6D9 718 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 CTSWP56202 376 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 ZKSCAN8Q15776 578 aaPredicted RBP9.75□□□□□ -0.85
SSBP2-201ENST00000320672 C11orf57Q6ZUT1 292 aaPredicted RBP9.75□□□□□ -0.85
SSBP2-201ENST00000320672 C7orf31Q8N865 590 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 STMN2Q93045 179 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 NOX5Q96PH1 765 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 KLRF2D3W0D1 207 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 CD58P19256 250 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 RPS8P62241 208 aaKnown RBP9.75□□□□□ -0.85
SSBP2-201ENST00000320672 CUL4BQ13620 913 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 RPS6KA1Q15418 735 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 CLUL1Q15846 466 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 SYCP2LQ5T4T6 812 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 PCDHA7Q9UN72 937 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 USP17L3A6NCW0 530 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 USP17L4A6NCW7 530 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 ARHGAP42A6NI28 874 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 USP17L1Q7RTZ2 530 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 SREK1Q8WXA9 508 aaKnown RBP9.75□□□□□ -0.85
SSBP2-201ENST00000320672 PSTPIP2Q9H939 334 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 CUTAO60888 179 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 SATB1Q01826 763 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 ACRBPQ8NEB7 543 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 CYP2D6P10635 497 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 RFX1P22670 979 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 EHHADHQ08426 723 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 PNMA1Q8ND90 353 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 SUPT20HQ8NEM7 779 aa9.75□□□□□ -0.85
SSBP2-201ENST00000320672 CHGBP05060 677 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 PLCG2P16885 1265 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 IFIH1Q9BYX4 1025 aaKnown RBP9.74□□□□□ -0.85
SSBP2-201ENST00000320672 ZCWPW1Q9H0M4 648 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 RAD50Q92878 1312 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 CLGNO14967 610 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 PDIA4P13667 645 aaKnown RBP9.74□□□□□ -0.85
SSBP2-201ENST00000320672 KRT12Q99456 494 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 KDM5BQ9UGL1 1544 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 ADCY8P40145 1251 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 HP1BP3Q5SSJ5 553 aaPredicted RBP9.74□□□□□ -0.85
SSBP2-201ENST00000320672 ANKRD35Q8N283 1001 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 FAM184BQ9ULE4 1060 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 FLOT1O75955 427 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 NIM1KQ8IY84 436 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 KIFAP3Q92845 792 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 TMEM87BQ96K49 555 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 PIGSQ96S52 555 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 INTUQ9ULD6 942 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.74□□□□□ -0.85
SSBP2-201ENST00000320672 SUPT6HQ7KZ85 1726 aaKnown RBP9.74□□□□□ -0.85
SSBP2-201ENST00000320672 SOS2Q07890 1332 aaPredicted RBP9.74□□□□□ -0.85
SSBP2-201ENST00000320672 CHL1O00533 1208 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 PTGDRQ13258 359 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 MYSM1Q5VVJ2 828 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 POMGNT1Q8WZA1 660 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 ZSCAN10Q96SZ4 725 aaPredicted RBP9.74□□□□□ -0.85
SSBP2-201ENST00000320672 PUS7LQ9H0K6 701 aaKnown RBP9.74□□□□□ -0.85
SSBP2-201ENST00000320672 EFCC1Q9HA90 598 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 DISC1Q9NRI5 854 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 ZNF215Q9UL58 517 aaPredicted RBP9.74□□□□□ -0.85
SSBP2-201ENST00000320672 PDE6AP16499 860 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 LTKP29376 864 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 LIG4P49917 911 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 PLA2G4DQ86XP0 818 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 PALM2Q8IXS6 379 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 OGFRQ9NZT2 677 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms