RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 MKL1Q969V6 931 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 POLMQ9NP87 494 aaPredicted RBP3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 NYAP2Q9P242 653 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 SSC5DA1L4H1 1573 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 LOC102724159A0A0B4J2E5 919 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 IGKV6D-41A0A0C4DH26 115 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 A0A0D9SFI3 127 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 C19orf81C9J6K1 198 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 M0R2C6 588 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 ZNF213O14771 459 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 PPP1R12BO60237 982 aaPredicted RBP3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 DDAH1O94760 285 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 ASNSP08243 561 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 INHBEP58166 350 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 PPARAQ07869 468 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 PWP2Q15269 919 aaKnown RBP3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 SH3D19Q5HYK7 790 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 AKNAD1Q5T1N1 836 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 USP48Q86UV5 1035 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 INSM2Q96T92 566 aaPredicted RBP3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 USP26Q9BXU7 913 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 ANTXR1Q9H6X2 564 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 TMPRSS4Q9NRS4 437 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 SERPINB13Q9UIV8 391 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 MYH15Q9Y2K3 1946 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 TDO2P48775 406 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 GNAQP50148 359 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 PABPC4Q13310 644 aaKnown RBP eCLIP3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 SGMS1Q86VZ5 419 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 LCORLQ8N3X6 602 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 GMCL1P1Q8NEA9 526 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 NEDD1Q8NHV4 660 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 LPAR1Q92633 364 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 SNX21Q969T3 373 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 ZSCAN31Q96LW9 406 aaPredicted RBP3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 TRIM34Q9BYJ4 488 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 PUS7LQ9H0K6 701 aaKnown RBP3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 CXCL11O14625 94 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 SPTLC1O15269 473 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 RHOQP17081 205 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 RGS3P49796 1198 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 INSM1Q01101 510 aaPredicted RBP3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 PPATQ06203 517 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 PPIL2Q13356 520 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 IRF5Q13568 498 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 VPS53Q5VIR6 699 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 CTR9Q6PD62 1173 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 OLFM4Q6UX06 510 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 PRICKLE2Q7Z3G6 844 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 KIAA0825Q8IV33 1275 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 SH3RF3Q8TEJ3 882 aaPredicted RBP3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 TEPSINQ96N21 525 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 TBC1D32Q96NH3 1257 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 KDM4CQ9H3R0 1056 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 SH2B1Q9NRF2 756 aaPredicted RBP3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 RBM28Q9NW13 759 aaKnown RBP3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 MCM5P33992 734 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 LDLRAD1Q5T700 205 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 LBX2Q6XYB7 198 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 MFSD6Q6ZSS7 791 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 IQCA1Q86XH1 822 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 CCDC116Q8IYX3 515 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 ANKRD13AQ8IZ07 590 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 SCYL3Q8IZE3 742 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 DCAF4Q8WV16 495 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 TANGO6Q9C0B7 1094 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 GLT8D2Q9H1C3 349 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 KANSL2Q9H9L4 492 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 ARHGEF10LQ9HCE6 1279 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 HMX1Q9NP08 348 aaPredicted RBP3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 CABP5Q9NP86 173 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 AATFQ9NY61 560 aaKnown RBP eCLIP3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 DNMT3LQ9UJW3 386 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 RBM8AQ9Y5S9 174 aaKnown RBP3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 GJA3Q9Y6H8 435 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 RLFQ13129 1914 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 MGAMO43451 1857 aa3.87□□□□□ -1.79
SCAMP1-201ENST00000320280 STK36Q9NRP7 1315 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 CCDC196A0A1B0GTZ2 297 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 DDNO94850 711 aaPredicted RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 POLR3DP05423 398 aaPredicted RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 PPP1R26Q5T8A7 1209 aaPredicted RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 CREB3L3Q68CJ9 461 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 KIFC2Q96AC6 838 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 GMCL1Q96IK5 515 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 PRMT6Q96LA8 375 aaPredicted RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 CNTNAP3BQ96NU0 1288 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 GPR101Q96P66 508 aaPredicted RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 CNTNAP3Q9BZ76 1288 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 EPB41L4AQ9HCS5 686 aaPredicted RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 CYLDQ9NQC7 956 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 MAP3K20Q9NYL2 800 aaKnown RBP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 GGA3Q9NZ52 723 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 KCNH4Q9UQ05 1017 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 KIF3AQ9Y496 699 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 ERICH2A1L162 156 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 SLC27A2O14975 620 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 FGAP02671 866 aa3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 RBM5P52756 815 aaKnown RBP eCLIP3.86□□□□□ -1.79
SCAMP1-201ENST00000320280 OAZ1P54368 228 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms