RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 NPY5RQ15761 445 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 ZNF804AQ7Z570 1209 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 ATRIPQ8WXE1 791 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 SERPINB2P05120 415 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 CALM1P0DP23 149 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 CALM2P0DP24 149 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 CALM3P0DP25 149 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 PACS2Q86VP3 889 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 DDAH1O94760 285 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 TFRCP02786 760 aaKnown RBP17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 TXLNAP40222 546 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 MFSD14BQ5SR56 506 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 C12orf60Q5U649 245 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 TYW1BQ6NUM6 668 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 WDR66Q8TBY9 1149 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 XDHP47989 1333 aa17.56■□□□□ 0.4
SHROOM1-201ENST00000319854 ORC4O43929 436 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 AMOTL1Q8IY63 956 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 IQUBQ8NA54 791 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 MXD3Q9BW11 206 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 AFF2P51816 1311 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 BCORQ6W2J9 1755 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 PP2D1A8MPX8 630 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 ARHGAP6O43182 974 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 RAD21O60216 631 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 BAG3O95817 575 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 SLURP2P0DP57 97 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 CLEC10AQ8IUN9 316 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 TEX11Q8IYF3 940 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 PUF60Q9UHX1 559 aaKnown RBP17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 FAM205AQ6ZU69 1335 aa17.55■□□□□ 0.4
SHROOM1-201ENST00000319854 MTF1Q14872 753 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 GOLGA1Q92805 767 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 EEF2KMTQ96G04 330 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 PNKPQ96T60 521 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 BAG1Q99933 345 aaPredicted RBP17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 ANKZF1Q9H8Y5 726 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 CD209Q9NNX6 404 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 BEND6Q5SZJ8 279 aaPredicted RBP17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 MED15Q96RN5 788 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 MYH6P13533 1939 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 DUOX1Q9NRD9 1551 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 GTF2A1P52655 376 aaPredicted RBP17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 USP17L2Q6R6M4 530 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 PAGE5Q96GU1 130 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 MTA3Q9BTC8 594 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 MRPL44Q9H9J2 332 aaKnown RBP17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 FAN1Q9Y2M0 1017 aa17.54■□□□□ 0.4
SHROOM1-201ENST00000319854 FAM237AA0A1B0GTK4 181 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 CCDC151A5D8V7 595 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 GYS1P13807 737 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 KIF5BP33176 963 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 GTF2IP78347 998 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 PLEKHA4Q9H4M7 779 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 GGA1Q9UJY5 639 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 TIAM2Q8IVF5 1701 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 CD44P16070 742 aaKnown RBP17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 DHX8Q14562 1220 aaKnown RBP17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 PPP2R5BQ15173 497 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 INF2Q27J81 1249 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 ICE2Q659A1 982 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 FCHSD1Q86WN1 690 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 TC2NQ8N9U0 490 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 RGS22Q8NE09 1264 aa17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 CCDC12Q8WUD4 166 aaPredicted RBP17.53■□□□□ 0.4
SHROOM1-201ENST00000319854 FGRP09769 529 aa17.52■□□□□ 0.4
SHROOM1-201ENST00000319854 RCAN1P53805 252 aa17.52■□□□□ 0.4
SHROOM1-201ENST00000319854 PFKFB3Q16875 520 aaPredicted RBP17.52■□□□□ 0.4
SHROOM1-201ENST00000319854 UIMC1Q96RL1 719 aa17.52■□□□□ 0.4
SHROOM1-201ENST00000319854 UBA5Q9GZZ9 404 aa17.52■□□□□ 0.4
SHROOM1-201ENST00000319854 POLLQ9UGP5 575 aa17.52■□□□□ 0.4
SHROOM1-201ENST00000319854 COL5A3P25940 1745 aaPredicted RBP17.52■□□□□ 0.4
SHROOM1-201ENST00000319854 NID2Q14112 1375 aa17.52■□□□□ 0.4
SHROOM1-201ENST00000319854 TBX2Q13207 712 aaPredicted RBP17.52■□□□□ 0.4
SHROOM1-201ENST00000319854 IL17AQ16552 155 aa17.52■□□□□ 0.4
SHROOM1-201ENST00000319854 LEMD3Q9Y2U8 911 aa17.52■□□□□ 0.4
SHROOM1-201ENST00000319854 PHACTR2O75167 634 aa17.52■□□□□ 0.39
SHROOM1-201ENST00000319854 ATP2B2Q01814 1243 aa17.52■□□□□ 0.39
SHROOM1-201ENST00000319854 TMEM47Q9BQJ4 181 aa17.52■□□□□ 0.39
SHROOM1-201ENST00000319854 CCDC194A0A1B0GVG4 234 aa17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 CBFA2T2O43439 604 aa17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 CYTH3O43739 400 aa17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 MORC3Q14149 939 aa17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 DOK7Q18PE1 504 aa17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 SLC35G1Q2M3R5 365 aa17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 LEKR1Q6ZMV7 388 aa17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 ABCB6Q9NP58 842 aa17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 BTAF1O14981 1849 aa17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 EIF3CLB5ME19 914 aaKnown RBP17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 CCT6AP40227 531 aaKnown RBP17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 SCNN1DP51172 638 aa17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 BLIDQ8IZY5 108 aa17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 EYA3Q99504 573 aa17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 EIF3CQ99613 913 aaKnown RBP17.51■□□□□ 0.39
SHROOM1-201ENST00000319854 FRMPD2Q68DX3 1309 aaPredicted RBP17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 TEX33O43247 280 aa17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 CHMP4BP1P59074 171 aa17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 SBK1Q52WX2 424 aa17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 TNFRSF25Q93038 417 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms