RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SH3RF1Q7Z6J0 888 aa17.03■□□□□ 0.32
RPP40-201ENST00000319533 OSBP2Q969R2 916 aa17.03■□□□□ 0.32
RPP40-201ENST00000319533 TEX13BQ9BXU2 312 aa17.03■□□□□ 0.32
RPP40-201ENST00000319533 SYNPO2Q9UMS6 1093 aa17.03■□□□□ 0.32
RPP40-201ENST00000319533 TACC3Q9Y6A5 838 aa17.03■□□□□ 0.32
RPP40-201ENST00000319533 SYNGAP1Q96PV0 1343 aa17.02■□□□□ 0.32
RPP40-201ENST00000319533 F5H6K3 240 aa17.02■□□□□ 0.32
RPP40-201ENST00000319533 ADAMTS4O75173 837 aa17.02■□□□□ 0.32
RPP40-201ENST00000319533 PGK1P00558 417 aa17.02■□□□□ 0.32
RPP40-201ENST00000319533 KLRC3Q07444 240 aa17.02■□□□□ 0.32
RPP40-201ENST00000319533 C20orf194Q5TEA3 1177 aa17.02■□□□□ 0.32
RPP40-201ENST00000319533 PRPF38AQ8NAV1 312 aaKnown RBP17.02■□□□□ 0.32
RPP40-201ENST00000319533 APPBP2Q92624 585 aa17.02■□□□□ 0.32
RPP40-201ENST00000319533 MKL1Q969V6 931 aa17.02■□□□□ 0.32
RPP40-201ENST00000319533 TSEN34Q9BSV6 310 aaKnown RBP17.02■□□□□ 0.32
RPP40-201ENST00000319533 DCTPP1Q9H773 170 aa17.02■□□□□ 0.32
RPP40-201ENST00000319533 MKNK2Q9HBH9 465 aa17.02■□□□□ 0.32
RPP40-201ENST00000319533 PRDM5Q9NQX1 630 aaPredicted RBP17.02■□□□□ 0.32
RPP40-201ENST00000319533 KIAA0355O15063 1070 aa17.01■□□□□ 0.31
RPP40-201ENST00000319533 RNF113AO15541 343 aaKnown RBP17.01■□□□□ 0.31
RPP40-201ENST00000319533 NDUFB10O96000 172 aa17.01■□□□□ 0.31
RPP40-201ENST00000319533 ZFYP08048 801 aaPredicted RBP17.01■□□□□ 0.31
RPP40-201ENST00000319533 SMAD3P84022 425 aaKnown RBP17.01■□□□□ 0.31
RPP40-201ENST00000319533 ZNF697Q5TEC3 545 aa17.01■□□□□ 0.31
RPP40-201ENST00000319533 ZNF467Q7Z7K2 595 aaPredicted RBP17.01■□□□□ 0.31
RPP40-201ENST00000319533 NUP88Q99567 741 aaPredicted RBP17.01■□□□□ 0.31
RPP40-201ENST00000319533 EPB41L4AQ9HCS5 686 aaPredicted RBP17.01■□□□□ 0.31
RPP40-201ENST00000319533 CNPY2Q9Y2B0 182 aa17.01■□□□□ 0.31
RPP40-201ENST00000319533 RIPK3Q9Y572 518 aa17.01■□□□□ 0.31
RPP40-201ENST00000319533 A0A1W2PQ45 241 aaPredicted RBP17■□□□□ 0.31
RPP40-201ENST00000319533 A0A1W2PQY0 241 aa17■□□□□ 0.31
RPP40-201ENST00000319533 RAD21O60216 631 aa17■□□□□ 0.31
RPP40-201ENST00000319533 SNAI1O95863 264 aaPredicted RBP17■□□□□ 0.31
RPP40-201ENST00000319533 GNAT2P19087 354 aa17■□□□□ 0.31
RPP40-201ENST00000319533 ITGB8P26012 769 aa17■□□□□ 0.31
RPP40-201ENST00000319533 SNRNP48Q6IEG0 339 aaKnown RBP17■□□□□ 0.31
RPP40-201ENST00000319533 CCSAPQ6IQ19 270 aaPredicted RBP17■□□□□ 0.31
RPP40-201ENST00000319533 KLHDC9Q8NEP7 349 aa17■□□□□ 0.31
RPP40-201ENST00000319533 MINDY4BA8MYZ0 360 aa16.99■□□□□ 0.31
RPP40-201ENST00000319533 GPAA1O43292 621 aa16.99■□□□□ 0.31
RPP40-201ENST00000319533 CLTBP09497 229 aa16.99■□□□□ 0.31
RPP40-201ENST00000319533 ANKRD33Q7Z3H0 272 aa16.99■□□□□ 0.31
RPP40-201ENST00000319533 FAM161BQ96MY7 647 aa16.99■□□□□ 0.31
RPP40-201ENST00000319533 TOX2Q96NM4 488 aa16.99■□□□□ 0.31
RPP40-201ENST00000319533 SEMA6BQ9H3T3 888 aa16.99■□□□□ 0.31
RPP40-201ENST00000319533 SLC38A10Q9HBR0 1119 aa16.99■□□□□ 0.31
RPP40-201ENST00000319533 ZNF287Q9HBT7 754 aa16.99■□□□□ 0.31
RPP40-201ENST00000319533 MTMR4Q9NYA4 1195 aa16.99■□□□□ 0.31
RPP40-201ENST00000319533 CLIP2Q9UDT6 1046 aa16.99■□□□□ 0.31
RPP40-201ENST00000319533 FAM184BQ9ULE4 1060 aa16.99■□□□□ 0.31
RPP40-201ENST00000319533 SYNRGQ9UMZ2 1314 aa16.98■□□□□ 0.31
RPP40-201ENST00000319533 CDH23Q9H251 3354 aa16.98■□□□□ 0.31
RPP40-201ENST00000319533 MOXD2PA6NHM9 499 aa16.98■□□□□ 0.31
RPP40-201ENST00000319533 ZBED4O75132 1171 aa16.98■□□□□ 0.31
RPP40-201ENST00000319533 ACLYP53396 1101 aa16.98■□□□□ 0.31
RPP40-201ENST00000319533 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.98■□□□□ 0.31
RPP40-201ENST00000319533 GMCL1P1Q8NEA9 526 aa16.98■□□□□ 0.31
RPP40-201ENST00000319533 LENG1Q96BZ8 264 aaPredicted RBP16.98■□□□□ 0.31
RPP40-201ENST00000319533 DDX11Q96FC9 970 aa16.98■□□□□ 0.31
RPP40-201ENST00000319533 GPATCH3Q96I76 525 aa16.98■□□□□ 0.31
RPP40-201ENST00000319533 FGD4Q96M96 766 aa16.98■□□□□ 0.31
RPP40-201ENST00000319533 CDX2Q99626 313 aaPredicted RBP16.98■□□□□ 0.31
RPP40-201ENST00000319533 FEM1BQ9UK73 627 aa16.98■□□□□ 0.31
RPP40-201ENST00000319533 PLIN4Q96Q06 1357 aa16.98■□□□□ 0.31
RPP40-201ENST00000319533 PATL2C9JE40 543 aaKnown RBP16.97■□□□□ 0.31
RPP40-201ENST00000319533 DUSP11O75319 330 aaKnown RBP16.97■□□□□ 0.31
RPP40-201ENST00000319533 CST5P28325 142 aaPredicted RBP16.97■□□□□ 0.31
RPP40-201ENST00000319533 OAZ1P54368 228 aa16.97■□□□□ 0.31
RPP40-201ENST00000319533 EPHB4P54760 987 aa16.97■□□□□ 0.31
RPP40-201ENST00000319533 FAAP100Q0VG06 881 aa16.97■□□□□ 0.31
RPP40-201ENST00000319533 ZNF444Q8N0Y2 327 aaPredicted RBP16.97■□□□□ 0.31
RPP40-201ENST00000319533 STK11IPQ8N1F8 1099 aa16.97■□□□□ 0.31
RPP40-201ENST00000319533 CEP95Q96GE4 821 aa16.97■□□□□ 0.31
RPP40-201ENST00000319533 MYH4Q9Y623 1939 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 TMEM265A0A087WTH1 108 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 M0R2C6 588 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 TTLL1O95922 423 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 FDX1P10109 184 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 TDO2P48775 406 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 IFNL3Q8IZI9 196 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 CPXCR1Q8N123 301 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 CHST13Q8NET6 341 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 NEDD1Q8NHV4 660 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 NUP133Q8WUM0 1156 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 TTYH1Q9H313 450 aaPredicted RBP16.96■□□□□ 0.31
RPP40-201ENST00000319533 STARD7Q9NQZ5 370 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 FBXO40Q9UH90 709 aa16.96■□□□□ 0.31
RPP40-201ENST00000319533 ELP1O95163 1332 aa16.96■□□□□ 0.3
RPP40-201ENST00000319533 EYSQ5T1H1 3165 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 PQBP1O60828 265 aaKnown RBP16.95■□□□□ 0.3
RPP40-201ENST00000319533 PRDM1O75626 825 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 RAG1P15918 1043 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 CDK7P50613 346 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 NKX3-2P78367 333 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 ACVR2BQ13705 512 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 KCNA10Q16322 511 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 LRRFIP1Q32MZ4 808 aaKnown RBP16.95■□□□□ 0.3
RPP40-201ENST00000319533 TSHZ3Q63HK5 1081 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 KIFC2Q96AC6 838 aa16.95■□□□□ 0.3
RPP40-201ENST00000319533 COL25A1Q9BXS0 654 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms