RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 TEX11Q8IYF3 940 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 RSPH14Q9UHP6 348 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 MAN1B1Q9UKM7 699 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 TTF2Q9UNY4 1162 aaKnown RBP19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 PCDHAC2Q9Y5I4 1007 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 CCDC88AQ3V6T2 1871 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 SOWAHDA6NJG2 315 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 C21orf2O43822 256 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 CCDC175P0C221 793 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 ACTN2P35609 894 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 PICALMQ13492 652 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 IFIT1BQ5T764 474 aaKnown RBP19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 FANCBQ8NB91 859 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 LTBP1Q14766 1721 aa19.44■□□□□ 0.7
SCAMP4-201ENST00000316097 MYH2Q9UKX2 1941 aa19.43■□□□□ 0.7
SCAMP4-201ENST00000316097 TSPY2A6NKD2 308 aa19.43■□□□□ 0.7
SCAMP4-201ENST00000316097 ZNF18P17022 549 aa19.43■□□□□ 0.7
SCAMP4-201ENST00000316097 RHBDL3P58872 404 aa19.43■□□□□ 0.7
SCAMP4-201ENST00000316097 RTN1Q16799 776 aa19.43■□□□□ 0.7
SCAMP4-201ENST00000316097 ANKZF1Q9H8Y5 726 aa19.43■□□□□ 0.7
SCAMP4-201ENST00000316097 DAGLAQ9Y4D2 1042 aa19.43■□□□□ 0.7
SCAMP4-201ENST00000316097 FAM205AQ6ZU69 1335 aa19.43■□□□□ 0.7
SCAMP4-201ENST00000316097 SBK1Q52WX2 424 aa19.43■□□□□ 0.7
SCAMP4-201ENST00000316097 SRLQ86TD4 932 aa19.43■□□□□ 0.7
SCAMP4-201ENST00000316097 IQCA1Q86XH1 822 aa19.43■□□□□ 0.7
SCAMP4-201ENST00000316097 A0A0U1RQJ8 604 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 TFAP4Q01664 338 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 TBC1D22AQ8WUA7 517 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 ATRIPQ8WXE1 791 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 SAMSN1Q9NSI8 373 aaKnown RBP19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 LRRC37AA6NMS7 1700 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 USP17L3A6NCW0 530 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 USP17L4A6NCW7 530 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 PRR29P0C7W0 189 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 POSTNQ15063 836 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 AOC3Q16853 763 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 BEND6Q5SZJ8 279 aaPredicted RBP19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 LEKR1Q6ZMV7 388 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 USP17L1Q7RTZ2 530 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 MTMR7Q9Y216 660 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 RRP15Q9Y3B9 282 aaKnown RBP19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 SLX4Q8IY92 1834 aa19.42■□□□□ 0.7
SCAMP4-201ENST00000316097 SLURP2P0DP57 97 aa19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 MDM2Q00987 491 aaPredicted RBP19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 STYK1Q6J9G0 422 aa19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 PNKPQ96T60 521 aa19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 MKNK2Q9HBH9 465 aa19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 HOOK1Q9UJC3 728 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 CDKL5O76039 1030 aa19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 SSRP1Q08945 709 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 CPLX2Q6PUV4 134 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 HDXQ7Z353 690 aa19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 KIAA0825Q8IV33 1275 aa19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 SUGCTQ9HAC7 445 aa19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 IL17RBQ9NRM6 502 aa19.41■□□□□ 0.7
SCAMP4-201ENST00000316097 AKR1B15C9JRZ8 316 aaPredicted RBP19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 N4BP1O75113 896 aaKnown RBP19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 TRIM29Q14134 588 aa19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 TMTC2Q8N394 836 aa19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 KRI1Q8N9T8 703 aaKnown RBP19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 ENOX1Q8TC92 643 aaKnown RBP19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 KCNJ14Q9UNX9 436 aa19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 FLT1P17948 1338 aa19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 ORC4O43929 436 aa19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 ZBTB7AO95365 584 aa19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 PLEKHA8P1O95397 391 aa19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 RAD9BQ6WBX8 426 aa19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 GRAMD1CQ8IYS0 662 aa19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 CEP112Q8N8E3 955 aa19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 C7orf43Q8WVR3 580 aa19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 HNRNPLLQ8WVV9 542 aaKnown RBP19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 CDC23Q9UJX2 597 aa19.4■□□□□ 0.7
SCAMP4-201ENST00000316097 KIF5CO60282 957 aa19.39■□□□□ 0.7
SCAMP4-201ENST00000316097 GRIN1Q05586 938 aa19.39■□□□□ 0.7
SCAMP4-201ENST00000316097 WWC2Q6AWC2 1192 aa19.39■□□□□ 0.7
SCAMP4-201ENST00000316097 MLKLQ8NB16 471 aa19.39■□□□□ 0.7
SCAMP4-201ENST00000316097 CPLX3Q8WVH0 158 aa19.39■□□□□ 0.7
SCAMP4-201ENST00000316097 DACH1Q9UI36 760 aa19.39■□□□□ 0.7
SCAMP4-201ENST00000316097 ADGRG1Q9Y653 693 aa19.39■□□□□ 0.7
SCAMP4-201ENST00000316097 POLR2DO15514 142 aaKnown RBP19.39■□□□□ 0.69
SCAMP4-201ENST00000316097 NR1I3Q14994 352 aa19.39■□□□□ 0.69
SCAMP4-201ENST00000316097 CRACR2BQ8N4Y2 399 aaPredicted RBP19.39■□□□□ 0.69
SCAMP4-201ENST00000316097 IQUBQ8NA54 791 aa19.39■□□□□ 0.69
SCAMP4-201ENST00000316097 MED15Q96RN5 788 aa19.39■□□□□ 0.69
SCAMP4-201ENST00000316097 ABCB6Q9NP58 842 aa19.39■□□□□ 0.69
SCAMP4-201ENST00000316097 SERTAD1Q9UHV2 236 aa19.39■□□□□ 0.69
SCAMP4-201ENST00000316097 IFNAR1P17181 557 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 CACNB3P54284 484 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 TROAPQ12815 778 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 ZNF569Q5MCW4 686 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 RCSD1Q6JBY9 416 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 CNKSR1Q969H4 720 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 EYA3Q99504 573 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 DDX4Q9NQI0 724 aaKnown RBP19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 FAN1Q9Y2M0 1017 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 MAST2Q6P0Q8 1798 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 TEX33O43247 280 aa19.38■□□□□ 0.69
SCAMP4-201ENST00000316097 ECE2O60344 883 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms