RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 KIRREL3Q8IZU9 778 aa20.18■□□□□ 0.82
SPSB4-201ENST00000310546 SPATA20Q8TB22 786 aa20.18■□□□□ 0.82
SPSB4-201ENST00000310546 LSP1P33241 339 aa20.17■□□□□ 0.82
SPSB4-201ENST00000310546 SEC24CP53992 1094 aa20.17■□□□□ 0.82
SPSB4-201ENST00000310546 NNTQ13423 1086 aa20.17■□□□□ 0.82
SPSB4-201ENST00000310546 CCDC82Q8N4S0 544 aa20.17■□□□□ 0.82
SPSB4-201ENST00000310546 NKX2-3Q8TAU0 364 aa20.17■□□□□ 0.82
SPSB4-201ENST00000310546 FAXDC2Q96IV6 333 aa20.17■□□□□ 0.82
SPSB4-201ENST00000310546 RANBP6O60518 1105 aaKnown RBP20.17■□□□□ 0.82
SPSB4-201ENST00000310546 GCFC2P16383 781 aaKnown RBP20.17■□□□□ 0.82
SPSB4-201ENST00000310546 UBXN1Q04323 297 aa20.17■□□□□ 0.82
SPSB4-201ENST00000310546 DIS3L2Q8IYB7 885 aaKnown RBP20.17■□□□□ 0.82
SPSB4-201ENST00000310546 CWC25Q9NXE8 425 aaPredicted RBP20.17■□□□□ 0.82
SPSB4-201ENST00000310546 DUSP10Q9Y6W6 482 aa20.17■□□□□ 0.82
SPSB4-201ENST00000310546 UBN2Q6ZU65 1347 aa20.17■□□□□ 0.82
SPSB4-201ENST00000310546 SMTNP53814 917 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 HERVK_113P62684 666 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 SKOR1P84550 965 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 APOA5Q6Q788 366 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 SPATS2Q86XZ4 545 aaKnown RBP20.16■□□□□ 0.82
SPSB4-201ENST00000310546 RNPC3Q96LT9 517 aaKnown RBP20.16■□□□□ 0.82
SPSB4-201ENST00000310546 SCLT1Q96NL6 688 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 VCPKMTQ9H867 229 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 SAFBQ15424 915 aaKnown RBP eCLIP20.16■□□□□ 0.82
SPSB4-201ENST00000310546 IQCEQ6IPM2 695 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 EPSTI1Q96J88 318 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 PUS3Q9BZE2 481 aaKnown RBP20.16■□□□□ 0.82
SPSB4-201ENST00000310546 USP21Q9UK80 565 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 ITGB4P16144 1822 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 AFF2P51816 1311 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 ATXN2Q99700 1313 aaKnown RBP20.16■□□□□ 0.82
SPSB4-201ENST00000310546 TTC26A0AVF1 554 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 KRT86O43790 486 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 PDHBP11177 359 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 CASP7P55210 303 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 APBA1Q02410 837 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 DPYDQ12882 1025 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 TSR1Q2NL82 804 aaKnown RBP20.16■□□□□ 0.82
SPSB4-201ENST00000310546 NAIF1Q69YI7 327 aaPredicted RBP20.16■□□□□ 0.82
SPSB4-201ENST00000310546 LACRTQ9GZZ8 138 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 SLC40A1Q9NP59 571 aa20.16■□□□□ 0.82
SPSB4-201ENST00000310546 SPATA31A5Q5VU36 1347 aa20.15■□□□□ 0.82
SPSB4-201ENST00000310546 SPATA31A7Q8IWB4 1347 aa20.15■□□□□ 0.82
SPSB4-201ENST00000310546 NUP188Q5SRE5 1749 aa20.15■□□□□ 0.82
SPSB4-201ENST00000310546 PPP1R3GB7ZBB8 358 aa20.15■□□□□ 0.82
SPSB4-201ENST00000310546 CYP19A1P11511 503 aaPredicted RBP20.15■□□□□ 0.82
SPSB4-201ENST00000310546 COPB1P53618 953 aaKnown RBP20.15■□□□□ 0.82
SPSB4-201ENST00000310546 NR5A1Q13285 461 aa20.15■□□□□ 0.82
SPSB4-201ENST00000310546 E2F5Q15329 346 aa20.15■□□□□ 0.82
SPSB4-201ENST00000310546 ZNF473Q8WTR7 871 aaKnown RBP20.15■□□□□ 0.82
SPSB4-201ENST00000310546 PSMB7Q99436 277 aa20.15■□□□□ 0.82
SPSB4-201ENST00000310546 A0A087X0B3 334 aa20.15■□□□□ 0.82
SPSB4-201ENST00000310546 TEX11Q8IYF3 940 aa20.15■□□□□ 0.82
SPSB4-201ENST00000310546 CCDC114Q96M63 670 aa20.15■□□□□ 0.82
SPSB4-201ENST00000310546 EPN3Q9H201 632 aa20.15■□□□□ 0.82
SPSB4-201ENST00000310546 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.15■□□□□ 0.82
SPSB4-201ENST00000310546 A6NNZ2 444 aa20.14■□□□□ 0.82
SPSB4-201ENST00000310546 ZBTB43O43298 467 aa20.14■□□□□ 0.82
SPSB4-201ENST00000310546 TUBB8Q3ZCM7 444 aa20.14■□□□□ 0.82
SPSB4-201ENST00000310546 LRRC24Q50LG9 513 aa20.14■□□□□ 0.82
SPSB4-201ENST00000310546 CYB5R4Q7L1T6 521 aa20.14■□□□□ 0.82
SPSB4-201ENST00000310546 OR8K1Q8NGG5 319 aa20.14■□□□□ 0.82
SPSB4-201ENST00000310546 PUS7LQ9H0K6 701 aaKnown RBP20.14■□□□□ 0.82
SPSB4-201ENST00000310546 DDX20Q9UHI6 824 aaKnown RBP20.14■□□□□ 0.82
SPSB4-201ENST00000310546 DISP2A7MBM2 1401 aa20.14■□□□□ 0.81
SPSB4-201ENST00000310546 GOLGA8AA7E2F4 631 aa20.14■□□□□ 0.81
SPSB4-201ENST00000310546 RASSF9O75901 435 aa20.14■□□□□ 0.81
SPSB4-201ENST00000310546 GUCY1A2P33402 732 aa20.14■□□□□ 0.81
SPSB4-201ENST00000310546 CLNS1AP54105 237 aaKnown RBP20.14■□□□□ 0.81
SPSB4-201ENST00000310546 HDLBPQ00341 1268 aaKnown RBP20.14■□□□□ 0.81
SPSB4-201ENST00000310546 RABL6Q3YEC7 729 aaPredicted RBP20.14■□□□□ 0.81
SPSB4-201ENST00000310546 BICDL1Q6ZP65 573 aa20.14■□□□□ 0.81
SPSB4-201ENST00000310546 ZIM3Q96PE6 472 aa20.14■□□□□ 0.81
SPSB4-201ENST00000310546 MAPK8IP1Q9UQF2 711 aa20.14■□□□□ 0.81
SPSB4-201ENST00000310546 LUC7L2Q9Y383 392 aaKnown RBP20.14■□□□□ 0.81
SPSB4-201ENST00000310546 RCCD1A6NED2 376 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 SEMA3EO15041 775 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 TTF1Q15361 905 aaPredicted RBP20.13■□□□□ 0.81
SPSB4-201ENST00000310546 KIF6Q6ZMV9 814 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 EGFL6Q8IUX8 553 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 CCDC24Q8N4L8 307 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 EHBP1Q8NDI1 1231 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 PAGE5Q96GU1 130 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 CCT8L2Q96SF2 557 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 ITPK1Q13572 414 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 TRIM14Q14142 442 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 SNCBQ16143 134 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 EPB41P11171 864 aaKnown RBP20.13■□□□□ 0.81
SPSB4-201ENST00000310546 NTRK3Q16288 839 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 RILPL1Q5EBL4 403 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 WLSQ5T9L3 541 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 YTHDF3Q7Z739 585 aaKnown RBP20.13■□□□□ 0.81
SPSB4-201ENST00000310546 SMARCAL1Q9NZC9 954 aa20.13■□□□□ 0.81
SPSB4-201ENST00000310546 SRPRBQ9Y5M8 271 aaKnown RBP20.13■□□□□ 0.81
SPSB4-201ENST00000310546 B4E1Z4 1266 aa20.12■□□□□ 0.81
SPSB4-201ENST00000310546 KCNJ18B7U540 433 aa20.12■□□□□ 0.81
SPSB4-201ENST00000310546 IPO7O95373 1038 aaKnown RBP20.12■□□□□ 0.81
SPSB4-201ENST00000310546 RPSAP08865 295 aaKnown RBP20.12■□□□□ 0.81
SPSB4-201ENST00000310546 EPHB4P54760 987 aa20.12■□□□□ 0.81
SPSB4-201ENST00000310546 SSRP1Q08945 709 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms