RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TYW1BQ6NUM6 668 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 NFKBIAP25963 317 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 TAF11Q15544 211 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 PLIN2Q99541 437 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 A6NJR5 290 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 SESN3P58005 492 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 CCDC197Q8NCU1 140 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 PTPREP23469 700 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 RAP1GDS1P52306 607 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 RRAGAQ7L523 313 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 PLEKHM2Q8IWE5 1019 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 ZBTB8OSQ8IWT0 167 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 POMGNT1Q8WZA1 660 aa16.92■□□□□ 0.3
HCFC1-201ENST00000310441 GNGT2O14610 69 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 MROH5Q6ZUA9 1318 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 CLTAP09496 248 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 TMCO4Q5TGY1 634 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 APPBP2Q92624 585 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 PAWRQ96IZ0 340 aaKnown RBP16.91■□□□□ 0.3
HCFC1-201ENST00000310441 HEXIM1O94992 359 aaKnown RBP16.91■□□□□ 0.3
HCFC1-201ENST00000310441 DCAF5Q96JK2 942 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 JRKLQ9Y4A0 524 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 MYO5CQ9NQX4 1742 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 ZNF233A6NK53 670 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 IL2RBP14784 551 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 GAS7O60861 476 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 IFNB1P01574 187 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 SKIP12755 728 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 ACEP12821 1306 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 KCNJ18B7U540 433 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 MBD4O95243 580 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 KCNJ12Q14500 433 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 NCAPH2Q6IBW4 605 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 CHST3Q7LGC8 479 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 NLRX1Q86UT6 975 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 CCDC138Q96M89 665 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 GPCPD1Q9NPB8 672 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 YTHDC2Q9H6S0 1430 aaKnown RBP16.91■□□□□ 0.3
HCFC1-201ENST00000310441 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 ADPGKQ9BRR6 497 aa16.91■□□□□ 0.3
HCFC1-201ENST00000310441 ATP8B1O43520 1251 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 EXOC8Q8IYI6 725 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 ATP6V0A1Q93050 837 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 BICC1Q9H694 974 aaKnown RBP16.9■□□□□ 0.3
HCFC1-201ENST00000310441 ZMYM3Q14202 1370 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 SPDYE16A6NNV3 312 aaPredicted RBP16.9■□□□□ 0.3
HCFC1-201ENST00000310441 TFCP2Q12800 502 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 SPDYE2Q495Y8 402 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 ARHGEF18Q6ZSZ5 1173 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 MAST1Q9Y2H9 1570 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 SBNO2Q9Y2G9 1366 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 KCNK3O14649 394 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 BSPRYQ5W0U4 402 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 LMNAP02545 664 aaKnown RBP16.9■□□□□ 0.3
HCFC1-201ENST00000310441 KLC3Q6P597 504 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 SKA2Q8WVK7 121 aaPredicted RBP16.9■□□□□ 0.3
HCFC1-201ENST00000310441 NSFL1CQ9UNZ2 370 aaKnown RBP16.9■□□□□ 0.3
HCFC1-201ENST00000310441 RPAINQ86UA6 219 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 POLR3CQ9BUI4 534 aaPredicted RBP16.9■□□□□ 0.3
HCFC1-201ENST00000310441 NSFP46459 744 aaKnown RBP16.9■□□□□ 0.3
HCFC1-201ENST00000310441 SUPT20HQ8NEM7 779 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 CBX8Q9HC52 389 aa16.9■□□□□ 0.3
HCFC1-201ENST00000310441 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.9■□□□□ 0.3
HCFC1-201ENST00000310441 EFCAB14O75071 495 aa16.89■□□□□ 0.3
HCFC1-201ENST00000310441 GNGT1P63211 74 aa16.89■□□□□ 0.3
HCFC1-201ENST00000310441 IQCB1Q15051 598 aa16.89■□□□□ 0.3
HCFC1-201ENST00000310441 CNBD1Q8NA66 436 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 HESX1Q9UBX0 185 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 ARHGEF37A1IGU5 675 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 IFNA8P32881 189 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 PPARGP37231 505 aaPredicted RBP16.89■□□□□ 0.29
HCFC1-201ENST00000310441 DDB1Q16531 1140 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 MID2Q9UJV3 735 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 E9PMD0 336 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 H7C1D1 291 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 HOXB7P09629 217 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 LSM14BQ9BX40 385 aaKnown RBP16.89■□□□□ 0.29
HCFC1-201ENST00000310441 C14orf93Q9H972 538 aaKnown RBP16.89■□□□□ 0.29
HCFC1-201ENST00000310441 RIMS2Q9UQ26 1411 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 TMEM247A6NEH6 219 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 PCP11498 1178 aaKnown RBP16.89■□□□□ 0.29
HCFC1-201ENST00000310441 CDCA7Q9BWT1 371 aaPredicted RBP16.89■□□□□ 0.29
HCFC1-201ENST00000310441 PACSIN2Q9UNF0 486 aaPredicted RBP16.89■□□□□ 0.29
HCFC1-201ENST00000310441 IQSEC3Q9UPP2 1182 aaPredicted RBP16.89■□□□□ 0.29
HCFC1-201ENST00000310441 DISP3Q9P2K9 1392 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 MTX1Q13505 466 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 TNFAIP1Q13829 316 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 HAUS4Q9H6D7 363 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 LAD1O00515 517 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 HGSO14964 777 aaPredicted RBP16.89■□□□□ 0.29
HCFC1-201ENST00000310441 SLC27A2O14975 620 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 PDE6AP16499 860 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 TXKP42681 527 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 MRPL40Q9NQ50 206 aaKnown RBP16.89■□□□□ 0.29
HCFC1-201ENST00000310441 SLC13A4Q9UKG4 626 aa16.89■□□□□ 0.29
HCFC1-201ENST00000310441 GPC4O75487 556 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 PODNQ7Z5L7 613 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 DEPTORQ8TB45 409 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 CALR3Q96L12 384 aaKnown RBP16.88■□□□□ 0.29
HCFC1-201ENST00000310441 MED10Q9BTT4 135 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms