RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 DEFB129Q9H1M3 183 aa13.06□□□□□ -0.32
CTDSPL-202ENST00000310189 DDX19AQ9NUU7 478 aaKnown RBP13.06□□□□□ -0.32
CTDSPL-202ENST00000310189 GREB1LQ9C091 1923 aaPredicted RBP13.06□□□□□ -0.32
CTDSPL-202ENST00000310189 PNMA6FA0A0J9YX94 578 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 TRIM75PA6NK02 468 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 UBE2Q2LH0YL09 131 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 PPP6R2O75170 966 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 BMP3P12645 472 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 TRAPPC10P48553 1259 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 MAP3K10Q02779 954 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 ZSCAN23Q3MJ62 389 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 SUPT20HL1Q3ZLR7 823 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 ADALQ6DHV7 355 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 PPP1R18Q6NYC8 613 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 CLEC10AQ8IUN9 316 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 PIGSQ96S52 555 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 ZNF341Q9BYN7 854 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 UBA5Q9GZZ9 404 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 SCAF8Q9UPN6 1271 aaKnown RBP13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 CLIC4Q9Y696 253 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 PITPNM2Q9BZ72 1349 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 SCN4AP35499 1836 aa13.05□□□□□ -0.32
CTDSPL-202ENST00000310189 CTNND1O60716 968 aaKnown RBP13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 NR5A1Q13285 461 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 WWC2Q6AWC2 1192 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 KCTD1Q719H9 257 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 SULF1Q8IWU6 871 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 CCAR1Q8IX12 1150 aaKnown RBP13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 ADGRF4Q8IZF3 695 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 DAGLBQ8NCG7 672 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 ZC3H15Q8WU90 426 aaKnown RBP13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 CHURC1Q8WUH1 139 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 GPKOWQ92917 476 aaPredicted RBP eCLIP13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 FEZ1Q99689 392 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 NMRK2Q9NPI5 230 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 TMX2Q9Y320 296 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 A0A1W2PQ27 194 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 A0A1W2PQ64 194 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 A0A1W2PQD8 194 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 SMCO2A6NFE2 343 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 STXBP3O00186 592 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 ZBTB5O15062 677 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 CYTH3O43739 400 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 KINO60870 393 aaKnown RBP13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 ATP2B1P20020 1258 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 KRT25Q7Z3Z0 450 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 MRPS27Q92552 414 aaKnown RBP13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 NUP62CLQ9H1M0 184 aa13.04□□□□□ -0.32
CTDSPL-202ENST00000310189 ESYT2A0FGR8 921 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 TMEM232C9JQI7 657 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 CTAGE5O15320 804 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 CUTAO60888 179 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 NDUFB10O96000 172 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 SLURP2P0DP57 97 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 ADCY7P51828 1080 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 MRPL12P52815 198 aaKnown RBP13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 ZNF445P59923 1031 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 MCTP2Q6DN12 878 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 KRI1Q8N9T8 703 aaKnown RBP13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 CCDC34Q96HJ3 373 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 FTOQ9C0B1 505 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 ZMYND12Q9H0C1 365 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 JMJD4Q9H9V9 463 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 AS3MTQ9HBK9 375 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 PICK1Q9NRD5 415 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 FAM13BQ9NYF5 915 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 TMEM63CQ9P1W3 806 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 PCDHA7Q9UN72 937 aa13.03□□□□□ -0.32
CTDSPL-202ENST00000310189 BAZ2BQ9UIF8 2168 aaKnown RBP13.02□□□□□ -0.32
CTDSPL-202ENST00000310189 SLC16A2P36021 539 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 STAT2P52630 851 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 FAM160A1Q05DH4 1040 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 TTC38Q5R3I4 469 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 SYDE2Q5VT97 1194 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 PIK3AP1Q6ZUJ8 805 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 KRT26Q7Z3Y9 468 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 FAM160B2Q86V87 743 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 FSIP1Q8NA03 581 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 ANP32BQ92688 251 aaKnown RBP13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 PGBD1Q96JS3 809 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 TEPSINQ96N21 525 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 TNMDQ9H2S6 317 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
CTDSPL-202ENST00000310189 SYCE3A1L190 88 aa13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 ADM5C9JUS6 153 aa13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 NF2P35240 595 aa13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 DEKP35659 375 aaKnown RBP13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 USP14P54578 494 aa13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 NONOQ15233 471 aaKnown RBP eCLIP13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 LRSAM1Q6UWE0 723 aa13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 LDHDQ86WU2 507 aa13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 SIAH1Q8IUQ4 282 aa13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 CDAN1Q8IWY9 1227 aa13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 REXO1Q8N1G1 1221 aaKnown RBP13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 CUL5Q93034 780 aa13.01□□□□□ -0.33
CTDSPL-202ENST00000310189 CPVLQ9H3G5 476 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms