RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 MED7O43513 233 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 EEF2P13639 858 aaKnown RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 IL13P35225 146 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ITIH3Q06033 890 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 DRP2Q13474 957 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ERFEQ4G0M1 354 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 TMX3Q96JJ7 454 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ZFP91Q96JP5 570 aaPredicted RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CCDC68Q9H2F9 335 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 VCXQ9H320 206 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 UQCRHLA0A096LP55 91 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 NEURL1BA8MQ27 555 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 RPS6KB1P23443 525 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 POLGP54098 1239 aaPredicted RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ICA1Q05084 483 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 SREBF2Q12772 1141 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 MIS18BP1Q6P0N0 1132 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ZNF365Q70YC5 407 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 VPS52Q8N1B4 723 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 BBOF1Q8ND07 529 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CABLES1Q8TDN4 633 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 FBF1Q8TES7 1133 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 FAM212AQ96EL1 285 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 HAUS8Q9BT25 410 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 LMCD1Q9NZU5 365 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 PPEF1O14829 653 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TLR3O15455 904 aaKnown RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 OATP04181 439 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 CA4P22748 312 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 UBXN1Q04323 297 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 PPP1R21Q6ZMI0 780 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TMTC1Q8IUR5 882 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 LRWD1Q9UFC0 647 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 ABCC3O15438 1527 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 SH3BP5O60239 455 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 GCNT3O95395 438 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 HSPA4P34932 840 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 NNMTP40261 264 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 LIG4P49917 911 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 KPNA2P52292 529 aaKnown RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 FERMT3Q86UX7 667 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 ARHGEF25Q86VW2 580 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 FAM178BQ8IXR5 827 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TESK2Q96S53 571 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 VPS33BQ9H267 617 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 CALCOCO1Q9P1Z2 691 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 ANAPC5Q9UJX4 755 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 CPSF3Q9UKF6 684 aaKnown RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 LRFN2Q9ULH4 789 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 DCCP43146 1447 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 DYNC1I1O14576 645 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 CFBP00751 764 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 GTF2IP78347 998 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TBC1D8BQ0IIM8 1120 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 NEK8Q86SG6 692 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 SRRM1Q8IYB3 904 aaKnown RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 LEO1Q8WVC0 666 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 MXD3Q9BW11 206 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 COPRSQ9NQ92 184 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 RTN4Q9NQC3 1192 aaKnown RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 C1orf112Q9NSG2 853 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 STK17AQ9UEE5 414 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 MED14O60244 1454 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 RGL2O15211 777 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 SLC26A4O43511 780 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 PRPSAP1Q14558 356 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 SETDB1Q15047 1291 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 PREPLQ4J6C6 727 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 GBP6Q6ZN66 633 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 PPP1R2P1Q96PQ5 205 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 NOC4LQ9BVI4 516 aaKnown RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 ABT1Q9ULW3 272 aaKnown RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 PDE4DIPQ5VU43 2346 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 NUMA1Q14980 2115 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 AP3B1O00203 1094 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 F13A1P00488 732 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 FAM160A1Q05DH4 1040 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TFCP2Q12800 502 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TMEM179Q6ZVK1 233 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 MCPH1Q8NEM0 835 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 NEK9Q8TD19 979 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 KIF2CQ99661 725 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 NUB1Q9Y5A7 615 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 KIF20BQ96Q89 1820 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 RPS12P25398 132 aaKnown RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 UBXN2AP68543 259 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 PTK2Q05397 1052 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 CPXCR1Q8N123 301 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 ANKRD36BP1Q96IX9 119 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 USP40Q9NVE5 1235 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 FARP1Q9Y4F1 1045 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 CRB1P82279 1406 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 GLI2P10070 1586 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 HEG1Q9ULI3 1381 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 EXOC3O60645 756 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TNNT1P13805 278 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 ELF1P32519 619 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 MNAT1P51948 309 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 MTA1Q13330 715 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms