RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 PICK1Q9NRD5 415 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 POLR3EQ9NVU0 708 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 PCDHB6Q9Y5E3 794 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 MTMR14Q8NCE2 650 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 WRNIP1Q96S55 665 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 NR1I2O75469 434 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 U2AF2P26368 475 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRIM59-201ENST00000309784 TTC38Q5R3I4 469 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 FKBP1CQ5VVH2 108 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 CLIC6Q96NY7 704 aa12.73□□□□□ -0.37
TRIM59-201ENST00000309784 ZNF280AP59817 542 aaPredicted RBP12.72□□□□□ -0.37
TRIM59-201ENST00000309784 MAP3K11Q16584 847 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 INF2Q27J81 1249 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 SASS6Q6UVJ0 657 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 APOBEC3FQ8IUX4 373 aaKnown RBP12.72□□□□□ -0.37
TRIM59-201ENST00000309784 PCDHA4Q9UN74 947 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 RRP1BQ14684 758 aaKnown RBP12.72□□□□□ -0.37
TRIM59-201ENST00000309784 LETM2Q2VYF4 491 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 FAM83BQ5T0W9 1011 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 TSPY26PQ9H489 355 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 DDX19AQ9NUU7 478 aaKnown RBP12.72□□□□□ -0.37
TRIM59-201ENST00000309784 BARHL2Q9NY43 387 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 CAP2P40123 477 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 NOM1Q5C9Z4 860 aaKnown RBP12.72□□□□□ -0.37
TRIM59-201ENST00000309784 TANGO6Q9C0B7 1094 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 FAM13BQ9NYF5 915 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 CNTNAP1P78357 1384 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 NID2Q14112 1375 aa12.72□□□□□ -0.37
TRIM59-201ENST00000309784 ADCY7P51828 1080 aa12.71□□□□□ -0.37
TRIM59-201ENST00000309784 JAG1P78504 1218 aa12.71□□□□□ -0.37
TRIM59-201ENST00000309784 SLC39A14Q15043 492 aa12.71□□□□□ -0.37
TRIM59-201ENST00000309784 REXO1Q8N1G1 1221 aaKnown RBP12.71□□□□□ -0.37
TRIM59-201ENST00000309784 PCDHA1Q9Y5I3 950 aa12.71□□□□□ -0.37
TRIM59-201ENST00000309784 ATRNL1Q5VV63 1379 aa12.71□□□□□ -0.37
TRIM59-201ENST00000309784 DLEC1Q9Y238 1755 aa12.71□□□□□ -0.37
TRIM59-201ENST00000309784 LETM1O95202 739 aaPredicted RBP12.71□□□□□ -0.37
TRIM59-201ENST00000309784 CDC37Q16543 378 aaPredicted RBP12.71□□□□□ -0.37
TRIM59-201ENST00000309784 KRI1Q8N9T8 703 aaKnown RBP12.71□□□□□ -0.37
TRIM59-201ENST00000309784 DCAF4Q8WV16 495 aa12.71□□□□□ -0.37
TRIM59-201ENST00000309784 IGKV6D-41A0A0C4DH26 115 aa12.71□□□□□ -0.38
TRIM59-201ENST00000309784 INPP5BP32019 993 aa12.71□□□□□ -0.38
TRIM59-201ENST00000309784 HOOK2Q96ED9 719 aa12.71□□□□□ -0.38
TRIM59-201ENST00000309784 ZNF408Q9H9D4 720 aa12.71□□□□□ -0.38
TRIM59-201ENST00000309784 GRPEL1Q9HAV7 217 aa12.71□□□□□ -0.38
TRIM59-201ENST00000309784 ADALQ6DHV7 355 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 TYW1BQ6NUM6 668 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 JMJD4Q9H9V9 463 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 MRVI1Q9Y6F6 885 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 PLIN4Q96Q06 1357 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 PNMA6FA0A0J9YX94 578 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 A0A1W2PRG0 241 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 VWA3AA6NCI4 1184 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 SYKP43405 635 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 STAT2P52630 851 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 GAS2L3Q86XJ1 694 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 ERCC4Q92889 916 aaPredicted RBP12.7□□□□□ -0.38
TRIM59-201ENST00000309784 ZKSCAN4Q969J2 545 aaPredicted RBP12.7□□□□□ -0.38
TRIM59-201ENST00000309784 DDX60LQ5H9U9 1706 aaKnown RBP12.7□□□□□ -0.38
TRIM59-201ENST00000309784 MYH8P13535 1937 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 STXBP3O00186 592 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 ZBTB5O15062 677 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 NONOQ15233 471 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRIM59-201ENST00000309784 QRICH1Q2TAL8 776 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 EARS2Q5JPH6 523 aaKnown RBP12.7□□□□□ -0.38
TRIM59-201ENST00000309784 SYDE2Q5VT97 1194 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 LRSAM1Q6UWE0 723 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 CPXCR1Q8N123 301 aa12.7□□□□□ -0.38
TRIM59-201ENST00000309784 GLIS2Q9BZE0 524 aaPredicted RBP12.7□□□□□ -0.38
TRIM59-201ENST00000309784 NASPP49321 788 aaPredicted RBP12.69□□□□□ -0.38
TRIM59-201ENST00000309784 MRE11P49959 708 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 FAM160A1Q05DH4 1040 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 UBE2SQ16763 222 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 SUPT20HL1Q3ZLR7 823 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 CCDC192P0DO97 292 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 MMP14P50281 582 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 MRPL12P52815 198 aaKnown RBP12.69□□□□□ -0.38
TRIM59-201ENST00000309784 SPP2Q13103 211 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 SLC35G1Q2M3R5 365 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 KRT26Q7Z3Y9 468 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 PSTPIP2Q9H939 334 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 SH3GLB2Q9NR46 395 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 CDK5RAP2Q96SN8 1893 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 CCNT1O60563 726 aaKnown RBP12.69□□□□□ -0.38
TRIM59-201ENST00000309784 NF2P35240 595 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 NDUFA8P51970 172 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 DLK2Q6UY11 383 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 FBXO11Q86XK2 927 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 UIMC1Q96RL1 719 aa12.69□□□□□ -0.38
TRIM59-201ENST00000309784 ADARB2Q9NS39 739 aaKnown RBP12.69□□□□□ -0.38
TRIM59-201ENST00000309784 PTGDRQ13258 359 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 CHURC1Q8WUH1 139 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 CUL5Q93034 780 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 TMEM260Q9NX78 707 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 MYH6P13533 1939 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 KRT25Q7Z3Z0 450 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 FCHSD1Q86WN1 690 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 CCDC34Q96HJ3 373 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 AMNQ9BXJ7 453 aa12.68□□□□□ -0.38
TRIM59-201ENST00000309784 GOLPH3LQ9H4A5 285 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms