RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 FEM1BQ9UK73 627 aa20.16■□□□□ 0.82
HMGCLL1-202ENST00000308161 SYNPO2Q9UMS6 1093 aa20.16■□□□□ 0.82
HMGCLL1-202ENST00000308161 ZNF236Q9UL36 1845 aa20.15■□□□□ 0.82
HMGCLL1-202ENST00000308161 TMEM232C9JQI7 657 aa20.15■□□□□ 0.82
HMGCLL1-202ENST00000308161 ORC4O43929 436 aa20.15■□□□□ 0.82
HMGCLL1-202ENST00000308161 EVI5O60447 810 aa20.15■□□□□ 0.82
HMGCLL1-202ENST00000308161 MCCP23508 829 aa20.15■□□□□ 0.82
HMGCLL1-202ENST00000308161 SLC1A4P43007 532 aa20.15■□□□□ 0.82
HMGCLL1-202ENST00000308161 PPP4R3BQ5MIZ7 849 aa20.15■□□□□ 0.82
HMGCLL1-202ENST00000308161 ABRAQ8N0Z2 381 aa20.15■□□□□ 0.82
HMGCLL1-202ENST00000308161 NBPF3Q9H094 633 aa20.15■□□□□ 0.82
HMGCLL1-202ENST00000308161 RAVER2Q9HCJ3 691 aaKnown RBP20.15■□□□□ 0.82
HMGCLL1-202ENST00000308161 NR2E3Q9Y5X4 410 aa20.15■□□□□ 0.82
HMGCLL1-202ENST00000308161 HIP1O00291 1037 aa20.14■□□□□ 0.81
HMGCLL1-202ENST00000308161 COPB2P35606 906 aa20.14■□□□□ 0.81
HMGCLL1-202ENST00000308161 OLFML2BQ68BL8 750 aa20.14■□□□□ 0.81
HMGCLL1-202ENST00000308161 LHX8Q68G74 356 aa20.14■□□□□ 0.81
HMGCLL1-202ENST00000308161 KCTD1Q719H9 257 aa20.14■□□□□ 0.81
HMGCLL1-202ENST00000308161 RASGRP2Q7LDG7 609 aa20.14■□□□□ 0.81
HMGCLL1-202ENST00000308161 MAML3Q96JK9 1138 aa20.14■□□□□ 0.81
HMGCLL1-202ENST00000308161 C11orf49Q9H6J7 331 aa20.14■□□□□ 0.81
HMGCLL1-202ENST00000308161 RIPK3Q9Y572 518 aa20.14■□□□□ 0.81
HMGCLL1-202ENST00000308161 STAT2P52630 851 aa20.13■□□□□ 0.81
HMGCLL1-202ENST00000308161 CCDC96Q2M329 555 aa20.13■□□□□ 0.81
HMGCLL1-202ENST00000308161 PRAMEF19Q5SWL8 479 aa20.13■□□□□ 0.81
HMGCLL1-202ENST00000308161 ANO1Q5XXA6 986 aa20.13■□□□□ 0.81
HMGCLL1-202ENST00000308161 TBC1D10CQ8IV04 446 aa20.13■□□□□ 0.81
HMGCLL1-202ENST00000308161 TRPV1Q8NER1 839 aa20.13■□□□□ 0.81
HMGCLL1-202ENST00000308161 DDX20Q9UHI6 824 aaKnown RBP20.13■□□□□ 0.81
HMGCLL1-202ENST00000308161 ZMYM6O95789 1325 aa20.13■□□□□ 0.81
HMGCLL1-202ENST00000308161 MYCNP04198 464 aaPredicted RBP20.12■□□□□ 0.81
HMGCLL1-202ENST00000308161 CYBAP13498 195 aa20.12■□□□□ 0.81
HMGCLL1-202ENST00000308161 MNX1P50219 401 aaPredicted RBP20.12■□□□□ 0.81
HMGCLL1-202ENST00000308161 MFSD6Q6ZSS7 791 aa20.12■□□□□ 0.81
HMGCLL1-202ENST00000308161 DDX11Q96FC9 970 aa20.12■□□□□ 0.81
HMGCLL1-202ENST00000308161 GMCL1Q96IK5 515 aa20.12■□□□□ 0.81
HMGCLL1-202ENST00000308161 SLC38A10Q9HBR0 1119 aa20.12■□□□□ 0.81
HMGCLL1-202ENST00000308161 HOMER2Q9NSB8 354 aa20.12■□□□□ 0.81
HMGCLL1-202ENST00000308161 ZNF213O14771 459 aa20.11■□□□□ 0.81
HMGCLL1-202ENST00000308161 FGRP09769 529 aa20.11■□□□□ 0.81
HMGCLL1-202ENST00000308161 GSPT1P15170 499 aaKnown RBP20.11■□□□□ 0.81
HMGCLL1-202ENST00000308161 AKNAD1Q5T1N1 836 aa20.11■□□□□ 0.81
HMGCLL1-202ENST00000308161 TTC22Q5TAA0 569 aa20.11■□□□□ 0.81
HMGCLL1-202ENST00000308161 C7orf61Q8IZ16 206 aa20.11■□□□□ 0.81
HMGCLL1-202ENST00000308161 CHURC1Q8WUH1 139 aa20.11■□□□□ 0.81
HMGCLL1-202ENST00000308161 COLQQ9Y215 455 aaPredicted RBP20.11■□□□□ 0.81
HMGCLL1-202ENST00000308161 MSCO60682 206 aa20.1■□□□□ 0.81
HMGCLL1-202ENST00000308161 SNAP25P60880 206 aa20.1■□□□□ 0.81
HMGCLL1-202ENST00000308161 CHRDL2Q6WN34 429 aa20.1■□□□□ 0.81
HMGCLL1-202ENST00000308161 FAM160B2Q86V87 743 aa20.1■□□□□ 0.81
HMGCLL1-202ENST00000308161 STAG1Q8WVM7 1258 aa20.1■□□□□ 0.81
HMGCLL1-202ENST00000308161 RNF41Q9H4P4 317 aaPredicted RBP20.1■□□□□ 0.81
HMGCLL1-202ENST00000308161 NEDD4P46934 1319 aa20.09■□□□□ 0.81
HMGCLL1-202ENST00000308161 ZNF792Q3KQV3 632 aa20.09■□□□□ 0.81
HMGCLL1-202ENST00000308161 HABP4Q5JVS0 413 aaKnown RBP20.09■□□□□ 0.81
HMGCLL1-202ENST00000308161 RCSD1Q6JBY9 416 aa20.09■□□□□ 0.81
HMGCLL1-202ENST00000308161 CCDC174Q6PII3 467 aa20.09■□□□□ 0.81
HMGCLL1-202ENST00000308161 ZNFX1Q9P2E3 1918 aaKnown RBP20.09■□□□□ 0.81
HMGCLL1-202ENST00000308161 PFASO15067 1338 aa20.08■□□□□ 0.81
HMGCLL1-202ENST00000308161 ATP2A1O14983 1001 aa20.08■□□□□ 0.81
HMGCLL1-202ENST00000308161 IGHA2P01877 340 aa20.08■□□□□ 0.81
HMGCLL1-202ENST00000308161 TOP1P11387 765 aaKnown RBP20.08■□□□□ 0.81
HMGCLL1-202ENST00000308161 ANKRD35Q8N283 1001 aa20.08■□□□□ 0.81
HMGCLL1-202ENST00000308161 TMEM47Q9BQJ4 181 aa20.08■□□□□ 0.81
HMGCLL1-202ENST00000308161 ZKSCAN3Q9BRR0 538 aa20.08■□□□□ 0.81
HMGCLL1-202ENST00000308161 TINF2Q9BSI4 451 aa20.08■□□□□ 0.81
HMGCLL1-202ENST00000308161 FRMPD2Q68DX3 1309 aaPredicted RBP20.07■□□□□ 0.8
HMGCLL1-202ENST00000308161 FRMPD3Q5JV73 1810 aa20.07■□□□□ 0.8
HMGCLL1-202ENST00000308161 SEPT4O43236 478 aa20.07■□□□□ 0.8
HMGCLL1-202ENST00000308161 PCP11498 1178 aaKnown RBP20.07■□□□□ 0.8
HMGCLL1-202ENST00000308161 DCAF4Q8WV16 495 aa20.07■□□□□ 0.8
HMGCLL1-202ENST00000308161 ESR2Q92731 530 aa20.07■□□□□ 0.8
HMGCLL1-202ENST00000308161 AGBL1Q96MI9 1066 aa20.07■□□□□ 0.8
HMGCLL1-202ENST00000308161 GPCPD1Q9NPB8 672 aa20.07■□□□□ 0.8
HMGCLL1-202ENST00000308161 ZMYND8Q9ULU4 1186 aaPredicted RBP20.07■□□□□ 0.8
HMGCLL1-202ENST00000308161 FDX1P10109 184 aa20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 SLC16A2P36021 539 aa20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 OAZ1P54368 228 aa20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 IMMTQ16891 758 aaKnown RBP20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 GJC2Q5T442 439 aaPredicted RBP20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 TTBK2Q6IQ55 1244 aa20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 CHST13Q8NET6 341 aa20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 DSCC1Q9BVC3 393 aa20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 SENP6Q9GZR1 1112 aaPredicted RBP20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 IL25Q9H293 177 aa20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 TCP11L1Q9NUJ3 509 aa20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 FBXO40Q9UH90 709 aa20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 PRR12Q9ULL5 1215 aa20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 DIS3Q9Y2L1 958 aaKnown RBP20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 PLXNA1Q9UIW2 1896 aa20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 ALPK3Q96L96 1907 aa20.06■□□□□ 0.8
HMGCLL1-202ENST00000308161 KDM4AO75164 1064 aa20.05■□□□□ 0.8
HMGCLL1-202ENST00000308161 COL6A1P12109 1028 aa20.05■□□□□ 0.8
HMGCLL1-202ENST00000308161 ALAS1P13196 640 aa20.05■□□□□ 0.8
HMGCLL1-202ENST00000308161 TAL1P17542 331 aaPredicted RBP20.05■□□□□ 0.8
HMGCLL1-202ENST00000308161 NOVP48745 357 aa20.05■□□□□ 0.8
HMGCLL1-202ENST00000308161 RNF146Q9NTX7 359 aa20.05■□□□□ 0.8
HMGCLL1-202ENST00000308161 CTNNA3Q9UI47 895 aa20.05■□□□□ 0.8
HMGCLL1-202ENST00000308161 CNPY2Q9Y2B0 182 aa20.05■□□□□ 0.8
HMGCLL1-202ENST00000308161 B4E1Z4 1266 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms