RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CDC37L1Q7L3B6 337 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 HACL1Q9UJ83 578 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 DIP2AQ14689 1571 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 BLZF1Q9H2G9 400 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 MARK3P27448 753 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 ASIC2Q16515 512 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 CCDC14Q49A88 953 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 NSMCE1Q8WV22 266 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 TXNDC16Q9P2K2 825 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 IQSEC2Q5JU85 1478 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 E7EVH7 732 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 GH2P01242 217 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 C8orf34Q49A92 452 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 TMCO3Q6UWJ1 677 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 PARP2Q9UGN5 583 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 CFAP58Q5T655 872 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 PI16Q6UXB8 463 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 IWS1Q96ST2 819 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 PPP1R16BQ96T49 567 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 PODNQ7Z5L7 613 aa11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 BBXQ8WY36 941 aaPredicted RBP11.89□□□□□ -0.51
SYNPO2-201ENST00000307142 CDK8P49336 464 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 TBC1D8BQ0IIM8 1120 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 PAK1Q13153 545 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 BRIP1Q9BX63 1249 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 LUC7L2Q9Y383 392 aaKnown RBP11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 SYNRGQ9UMZ2 1314 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 KIAA1841Q6NSI8 718 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 ANTXR1Q9H6X2 564 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 LRMPQ12912 555 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 KLHL40Q2TBA0 621 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 FOXP4Q8IVH2 680 aaPredicted RBP11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 CD209Q9NNX6 404 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 SPATA31A5Q5VU36 1347 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 SPATA31A7Q8IWB4 1347 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 YWHAEP62258 255 aaKnown RBP11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 UVSSAQ2YD98 709 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 CCDC125Q86Z20 511 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 CCDC63Q8NA47 563 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 RAET1EQ8TD07 263 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 STAMQ92783 540 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 CELF1Q92879 486 aaKnown RBP11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 PANK4Q9NVE7 773 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 BCRP11274 1271 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 ZNF157P51786 506 aaPredicted RBP11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 GALNT17Q6IS24 598 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 MICAL1Q8TDZ2 1067 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 HAUS2Q9NVX0 235 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 FAM169AQ9Y6X4 670 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 CYP2D7A0A087X1C5 515 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 NDC80O14777 642 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 ATP2A1O14983 1001 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 FOSP01100 380 aaPredicted RBP11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 CYP4A11Q02928 519 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 CKAP4Q07065 602 aaKnown RBP11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 USP17L2Q6R6M4 530 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 IQCGQ9H095 443 aaKnown RBP11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 IFNKQ9P0W0 207 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 TTLL3Q9Y4R7 772 aa11.88□□□□□ -0.51
SYNPO2-201ENST00000307142 UBN2Q6ZU65 1347 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 KIDINS220Q9ULH0 1771 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 KRT86O43790 486 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 RASGRF1Q13972 1273 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 SP8Q8IXZ3 490 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 LINC00116Q8NCU8 138 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 SPOPO43791 374 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 FAM160A1Q05DH4 1040 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 PPP1R7Q15435 360 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 DCUN1D2Q6PH85 259 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 TLR3O15455 904 aaKnown RBP11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 ADD1P35611 737 aaKnown RBP11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 FAM160B2Q86V87 743 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 ZNF274Q96GC6 653 aaPredicted RBP11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 PAIP2Q9BPZ3 127 aaKnown RBP11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 HOXC10Q9NYD6 342 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 PLEKHG2Q9H7P9 1386 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 NRKQ7Z2Y5 1582 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 VWA3BQ502W6 1294 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 DEFB132Q7Z7B7 95 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 TMEM106CQ9BVX2 250 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 USTQ9Y2C2 406 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 USP17L5A8MUK1 530 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 OR52Z1P0C646 297 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 SEL1L2Q5TEA6 688 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 CCDC155Q8N6L0 562 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 ST7Q9NRC1 585 aa11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 CNOT7Q9UIV1 285 aaKnown RBP11.87□□□□□ -0.51
SYNPO2-201ENST00000307142 ZMYM1Q5SVZ6 1142 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 MTERF4Q7Z6M4 381 aaKnown RBP11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 GTF3C6Q969F1 213 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 RNF216Q9NWF9 866 aaPredicted RBP11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 GUCA1BQ9UMX6 200 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 PTCH1Q13635 1447 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 H0YCG3 227 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 SEC24BO95487 1268 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 HSPA4P34932 840 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms