RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 NGLY1Q96IV0 654 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 RYBPQ8N488 228 aaPredicted RBP14.64□□□□□ -0.07
TRIM56-201ENST00000306085 TMCO5AQ8N6Q1 288 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 LZICQ8WZA0 190 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 FAM135AQ9P2D6 1515 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 ATG16L1Q676U5 607 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 IMPACTQ9P2X3 320 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 TRPC6Q9Y210 931 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 EIF6P56537 245 aaKnown RBP14.64□□□□□ -0.07
TRIM56-201ENST00000306085 NCLNQ969V3 563 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 CYTH2Q99418 400 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 PNMA2Q9UL42 364 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 TRPC5Q9UL62 973 aaPredicted RBP14.64□□□□□ -0.07
TRIM56-201ENST00000306085 CFLARO15519 480 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 XPAP23025 273 aaPredicted RBP14.63□□□□□ -0.07
TRIM56-201ENST00000306085 CALCRLQ16602 461 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 USH1GQ495M9 461 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 ING2Q9H160 280 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.63□□□□□ -0.07
TRIM56-201ENST00000306085 HABP4Q5JVS0 413 aaKnown RBP14.63□□□□□ -0.07
TRIM56-201ENST00000306085 CACTINQ8WUQ7 758 aaKnown RBP14.63□□□□□ -0.07
TRIM56-201ENST00000306085 GSDMAQ96QA5 445 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 ADCY1Q08828 1119 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 NBPF10Q6P3W6 841 aaKnown RBP14.63□□□□□ -0.07
TRIM56-201ENST00000306085 NCF2P19878 526 aaPredicted RBP14.63□□□□□ -0.07
TRIM56-201ENST00000306085 DNM2P50570 870 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 HERC4Q5GLZ8 1057 aaPredicted RBP14.63□□□□□ -0.07
TRIM56-201ENST00000306085 TRIML2Q8N7C3 387 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 HINFPQ9BQA5 517 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 PDE11AQ9HCR9 933 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 DBNLQ9UJU6 430 aaKnown RBP14.63□□□□□ -0.07
TRIM56-201ENST00000306085 PDZD4Q76G19 769 aaPredicted RBP14.63□□□□□ -0.07
TRIM56-201ENST00000306085 RHPN1Q8TCX5 695 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 SUGT1Q9Y2Z0 365 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 SGK1O00141 431 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 RNF169Q8NCN4 708 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 CCDC141Q6ZP82 1450 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 BUB1O43683 1085 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 TXKP42681 527 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 PUM3Q15397 648 aaKnown RBP14.63□□□□□ -0.07
TRIM56-201ENST00000306085 NUDT16Q96DE0 195 aaKnown RBP14.63□□□□□ -0.07
TRIM56-201ENST00000306085 MMS19Q96T76 1030 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 AZI2Q9H6S1 392 aa14.63□□□□□ -0.07
TRIM56-201ENST00000306085 PRPF38AQ8NAV1 312 aaKnown RBP14.62□□□□□ -0.07
TRIM56-201ENST00000306085 ERICH3Q5RHP9 1530 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 RAD50Q92878 1312 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 CREB3L3Q68CJ9 461 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 ZFYVE1Q9HBF4 777 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 ZNF229Q9UJW7 825 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 CHPF2Q9P2E5 772 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 EFCAB14O75071 495 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 HOOK2Q96ED9 719 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 LDHBP07195 334 aaKnown RBP14.62□□□□□ -0.07
TRIM56-201ENST00000306085 TRAIPQ9BWF2 469 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 TEX12Q9BXU0 123 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 TOM1L1O75674 476 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 CYP2J2P51589 502 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 NELFCDQ8IXH7 590 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 GDAP1Q8TB36 358 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 TRIM15Q9C019 465 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 FNDC3AQ9Y2H6 1198 aaKnown RBP14.62□□□□□ -0.07
TRIM56-201ENST00000306085 KRT8P05787 483 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 ADKP55263 362 aaKnown RBP14.62□□□□□ -0.07
TRIM56-201ENST00000306085 PRR23D1E9PI22 279 aaPredicted RBP14.62□□□□□ -0.07
TRIM56-201ENST00000306085 RIMBP2O15034 1052 aa14.62□□□□□ -0.07
TRIM56-201ENST00000306085 PRR23D2P0DMB1 279 aaPredicted RBP14.62□□□□□ -0.07
TRIM56-201ENST00000306085 TEX9Q8N6V9 391 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 TRIM58Q8NG06 486 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 DNM3Q9UQ16 869 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 RRP15Q9Y3B9 282 aaKnown RBP14.61□□□□□ -0.07
TRIM56-201ENST00000306085 EXOC5O00471 708 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 DEUP1Q05D60 604 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 DYMQ7RTS9 669 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 ANXA1P04083 346 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 RANBP1P43487 201 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 ANKLE2Q86XL3 938 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 PPHLN1Q8NEY8 458 aaKnown RBP14.61□□□□□ -0.07
TRIM56-201ENST00000306085 NLRC4Q9NPP4 1024 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 INTS9Q9NV88 658 aaKnown RBP14.61□□□□□ -0.07
TRIM56-201ENST00000306085 PASKQ96RG2 1323 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 ZNF711Q9Y462 761 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 CAPRIN1Q14444 709 aaKnown RBP14.61□□□□□ -0.07
TRIM56-201ENST00000306085 ANKRD13DQ6ZTN6 518 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 TAGAPQ8N103 731 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 TTLL11Q8NHH1 800 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.61□□□□□ -0.07
TRIM56-201ENST00000306085 SYNDIG1LA6NDD5 238 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 SRGAP2BP0DMP2 458 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 YWHAHQ04917 246 aaPredicted RBP14.61□□□□□ -0.07
TRIM56-201ENST00000306085 RDH13Q8NBN7 331 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 ENOX1Q8TC92 643 aaKnown RBP14.61□□□□□ -0.07
TRIM56-201ENST00000306085 DMTNQ08495 405 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 HACE1Q8IYU2 909 aa14.61□□□□□ -0.07
TRIM56-201ENST00000306085 A6NJR5 290 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 POSTNQ15063 836 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 DNAJC6O75061 913 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 E2F6O75461 281 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 ZYXQ15942 572 aaKnown RBP14.6□□□□□ -0.07
TRIM56-201ENST00000306085 E2F4Q16254 413 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 TJAP1Q5JTD0 557 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms