RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 FEM1BQ9UK73 627 aa31.55■■■□□ 2.64
HDAC3-201ENST00000305264 CYTH3O43739 400 aa31.54■■■□□ 2.64
HDAC3-201ENST00000305264 HOXA7P31268 230 aaPredicted RBP31.54■■■□□ 2.64
HDAC3-201ENST00000305264 GNAQP50148 359 aa31.54■■■□□ 2.64
HDAC3-201ENST00000305264 FUT2Q10981 343 aa31.54■■■□□ 2.64
HDAC3-201ENST00000305264 NOGQ13253 232 aa31.54■■■□□ 2.64
HDAC3-201ENST00000305264 BTNL9Q6UXG8 535 aa31.54■■■□□ 2.64
HDAC3-201ENST00000305264 FAM43AQ8N2R8 423 aa31.54■■■□□ 2.64
HDAC3-201ENST00000305264 CNTNAP5Q8WYK1 1306 aa31.54■■■□□ 2.64
HDAC3-201ENST00000305264 CPLX1O14810 134 aa31.54■■■□□ 2.64
HDAC3-201ENST00000305264 CTDNEP1O95476 244 aa31.54■■■□□ 2.64
HDAC3-201ENST00000305264 KIF23Q02241 960 aaPredicted RBP31.54■■■□□ 2.64
HDAC3-201ENST00000305264 VEGFBP49765 207 aa31.53■■■□□ 2.64
HDAC3-201ENST00000305264 KIFC2Q96AC6 838 aa31.53■■■□□ 2.64
HDAC3-201ENST00000305264 SLF1Q9BQI6 1058 aa31.53■■■□□ 2.64
HDAC3-201ENST00000305264 IGF2BP3O00425 579 aaKnown RBP eCLIP31.52■■■□□ 2.64
HDAC3-201ENST00000305264 PLA2G6O60733 806 aa31.52■■■□□ 2.64
HDAC3-201ENST00000305264 SYDE2Q5VT97 1194 aa31.52■■■□□ 2.64
HDAC3-201ENST00000305264 ANKRD23Q86SG2 305 aa31.52■■■□□ 2.64
HDAC3-201ENST00000305264 PHKBQ93100 1093 aa31.52■■■□□ 2.64
HDAC3-201ENST00000305264 LZTS2Q9BRK4 669 aa31.52■■■□□ 2.64
HDAC3-201ENST00000305264 WDR33Q9C0J8 1336 aaKnown RBP31.52■■■□□ 2.64
HDAC3-201ENST00000305264 DHX16O60231 1041 aaKnown RBP31.52■■■□□ 2.64
HDAC3-201ENST00000305264 FAM160B2Q86V87 743 aa31.52■■■□□ 2.64
HDAC3-201ENST00000305264 ADGRF4Q8IZF3 695 aa31.52■■■□□ 2.64
HDAC3-201ENST00000305264 CHURC1Q8WUH1 139 aa31.52■■■□□ 2.64
HDAC3-201ENST00000305264 SPZ1Q9BXG8 430 aa31.52■■■□□ 2.64
HDAC3-201ENST00000305264 ASCC2Q9H1I8 757 aaPredicted RBP31.52■■■□□ 2.64
HDAC3-201ENST00000305264 PPP1R9AQ9ULJ8 1098 aa31.52■■■□□ 2.64
HDAC3-201ENST00000305264 PRR12Q9ULL5 1215 aa31.52■■■□□ 2.64
HDAC3-201ENST00000305264 PCNTO95613 3336 aa31.51■■■□□ 2.63
HDAC3-201ENST00000305264 PDHXO00330 501 aa31.51■■■□□ 2.63
HDAC3-201ENST00000305264 IFNAR1P17181 557 aa31.51■■■□□ 2.63
HDAC3-201ENST00000305264 CUL4AQ13619 759 aa31.51■■■□□ 2.63
HDAC3-201ENST00000305264 NSUN7Q8NE18 718 aaKnown RBP31.51■■■□□ 2.63
HDAC3-201ENST00000305264 MYH6P13533 1939 aa31.51■■■□□ 2.63
HDAC3-201ENST00000305264 THSD7BQ9C0I4 1608 aa31.51■■■□□ 2.63
HDAC3-201ENST00000305264 IRX3P78415 501 aaPredicted RBP31.5■■■□□ 2.63
HDAC3-201ENST00000305264 SREBF2Q12772 1141 aa31.5■■■□□ 2.63
HDAC3-201ENST00000305264 RIOX1Q9H6W3 641 aa31.5■■■□□ 2.63
HDAC3-201ENST00000305264 VAT1LQ9HCJ6 419 aa31.5■■■□□ 2.63
HDAC3-201ENST00000305264 COL11A1P12107 1806 aaPredicted RBP31.5■■■□□ 2.63
HDAC3-201ENST00000305264 PABPC4Q13310 644 aaKnown RBP eCLIP31.5■■■□□ 2.636e-8■■■□□ 17.1
HDAC3-201ENST00000305264 PIBF1Q8WXW3 757 aa31.5■■■□□ 2.63
HDAC3-201ENST00000305264 JMJD4Q9H9V9 463 aa31.5■■■□□ 2.63
HDAC3-201ENST00000305264 A0A0G2JMZ2 1700 aa31.49■■■□□ 2.63
HDAC3-201ENST00000305264 JAK2O60674 1132 aa31.49■■■□□ 2.63
HDAC3-201ENST00000305264 BECN1Q14457 450 aa31.49■■■□□ 2.63
HDAC3-201ENST00000305264 COG2Q14746 738 aa31.49■■■□□ 2.63
HDAC3-201ENST00000305264 PRPF38AQ8NAV1 312 aaKnown RBP31.49■■■□□ 2.63
HDAC3-201ENST00000305264 ATG4CQ96DT6 458 aa31.49■■■□□ 2.63
HDAC3-201ENST00000305264 SLC45A1Q9Y2W3 748 aa31.49■■■□□ 2.63
HDAC3-201ENST00000305264 CEP350Q5VT06 3117 aa31.49■■■□□ 2.63
HDAC3-201ENST00000305264 hCG_1642624A0A1W2PR95 340 aa31.48■■■□□ 2.63
HDAC3-201ENST00000305264 SPDYE16A6NNV3 312 aaPredicted RBP31.48■■■□□ 2.63
HDAC3-201ENST00000305264 INHBEP58166 350 aa31.48■■■□□ 2.63
HDAC3-201ENST00000305264 SNAP25P60880 206 aa31.48■■■□□ 2.63
HDAC3-201ENST00000305264 CPLX2Q6PUV4 134 aaKnown RBP31.48■■■□□ 2.63
HDAC3-201ENST00000305264 IFNL1Q8IU54 200 aa31.48■■■□□ 2.63
HDAC3-201ENST00000305264 SMARCA1P28370 1054 aa31.48■■■□□ 2.63
HDAC3-201ENST00000305264 DSG3P32926 999 aa31.48■■■□□ 2.63
HDAC3-201ENST00000305264 P2RX7Q99572 595 aaKnown RBP31.48■■■□□ 2.63
HDAC3-201ENST00000305264 PTPDC1A2A3K4 754 aa31.47■■■□□ 2.63
HDAC3-201ENST00000305264 CDKL5O76039 1030 aa31.47■■■□□ 2.63
HDAC3-201ENST00000305264 CYP2C8P10632 490 aa31.47■■■□□ 2.63
HDAC3-201ENST00000305264 HOMER1Q86YM7 354 aa31.47■■■□□ 2.63
HDAC3-201ENST00000305264 SLC26A6Q9BXS9 759 aa31.47■■■□□ 2.63
HDAC3-201ENST00000305264 TM4SF4P48230 202 aa31.47■■■□□ 2.63
HDAC3-201ENST00000305264 PIGSQ96S52 555 aa31.47■■■□□ 2.63
HDAC3-201ENST00000305264 MYPNQ86TC9 1320 aa31.46■■■□□ 2.63
HDAC3-201ENST00000305264 OSBPP22059 807 aa31.46■■■□□ 2.63
HDAC3-201ENST00000305264 MTMR8Q96EF0 704 aa31.46■■■□□ 2.63
HDAC3-201ENST00000305264 LLPHQ9BRT6 129 aaKnown RBP31.46■■■□□ 2.63
HDAC3-201ENST00000305264 FOXD4L1Q9NU39 408 aa31.46■■■□□ 2.63
HDAC3-201ENST00000305264 PNMA3Q9UL41 463 aa31.46■■■□□ 2.63
HDAC3-201ENST00000305264 HERVK_113P62684 666 aa31.45■■■□□ 2.63
HDAC3-201ENST00000305264 POTEEQ6S8J3 1075 aa31.45■■■□□ 2.63
HDAC3-201ENST00000305264 V9GY48 417 aaPredicted RBP31.45■■■□□ 2.63
HDAC3-201ENST00000305264 FMNL1O95466 1100 aaPredicted RBP31.45■■■□□ 2.62
HDAC3-201ENST00000305264 CDC37Q16543 378 aaPredicted RBP31.45■■■□□ 2.62
HDAC3-201ENST00000305264 SMARCC2Q8TAQ2 1214 aa31.45■■■□□ 2.62
HDAC3-201ENST00000305264 DDX11Q96FC9 970 aa31.45■■■□□ 2.62
HDAC3-201ENST00000305264 RNF26Q9BY78 433 aaPredicted RBP31.45■■■□□ 2.62
HDAC3-201ENST00000305264 RANBP17Q9H2T7 1088 aaKnown RBP31.45■■■□□ 2.62
HDAC3-201ENST00000305264 HOXC10Q9NYD6 342 aa31.45■■■□□ 2.62
HDAC3-201ENST00000305264 ADAMTS5Q9UNA0 930 aa31.45■■■□□ 2.62
HDAC3-201ENST00000305264 VWA5AO00534 786 aa31.44■■■□□ 2.62
HDAC3-201ENST00000305264 SLC4A3P48751 1232 aa31.44■■■□□ 2.62
HDAC3-201ENST00000305264 SSRP1Q08945 709 aaKnown RBP31.44■■■□□ 2.62
HDAC3-201ENST00000305264 RRP36Q96EU6 259 aaKnown RBP31.44■■■□□ 2.62
HDAC3-201ENST00000305264 SLC38A10Q9HBR0 1119 aa31.43■■■□□ 2.62
HDAC3-201ENST00000305264 PRPF3O43395 683 aaKnown RBP31.43■■■□□ 2.62
HDAC3-201ENST00000305264 QRICH1Q2TAL8 776 aa31.43■■■□□ 2.62
HDAC3-201ENST00000305264 TRIM22Q8IYM9 498 aa31.43■■■□□ 2.62
HDAC3-201ENST00000305264 ZCCHC17Q9NP64 241 aaKnown RBP31.43■■■□□ 2.62
HDAC3-201ENST00000305264 STK36Q9NRP7 1315 aa31.42■■■□□ 2.62
HDAC3-201ENST00000305264 PEX10O60683 326 aa31.42■■■□□ 2.62
HDAC3-201ENST00000305264 FDPSP14324 419 aaKnown RBP31.42■■■□□ 2.62
HDAC3-201ENST00000305264 MAP2K2P36507 400 aa31.42■■■□□ 2.62
HDAC3-201ENST00000305264 SPRYD3Q8NCJ5 442 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms